# HG changeset patch # User John Donoghue # Date 1458396323 14400 # Node ID 6a33c32796b2e5775f37017390eb60d633be1c5c # Parent 4970d27d3e129c6124db9f75d8e447149c79f148 of-octcdf: update to 1.1.10 * src/of-octcdf.mk: update version, checksum * src/of-octcdf-1-cross-fixes.patch: removed file * dist-files.mk: remove ref to of-octcdf-1-cross-fixes.patch diff -r 4970d27d3e12 -r 6a33c32796b2 dist-files.mk --- a/dist-files.mk Sat Mar 19 10:00:08 2016 -0400 +++ b/dist-files.mk Sat Mar 19 10:05:23 2016 -0400 @@ -487,7 +487,6 @@ of-nurbs.mk \ of-ocs-1-cross-fixes.patch \ of-ocs.mk \ - of-octcdf-1-cross-fixes.patch \ of-octcdf.mk \ of-odepkg.mk \ of-optim.mk \ diff -r 4970d27d3e12 -r 6a33c32796b2 src/of-octcdf-1-cross-fixes.patch --- a/src/of-octcdf-1-cross-fixes.patch Sat Mar 19 10:00:08 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1138 +0,0 @@ -diff -ur octcdf.orig/src/configure octcdf/src/configure ---- octcdf.orig/src/configure 2015-04-14 11:21:17.161247377 -0400 -+++ octcdf/src/configure 2015-04-14 11:22:49.289084238 -0400 -@@ -195,8 +195,7 @@ - as_suggested=" as_lineno_1=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_1a=\$LINENO - as_lineno_2=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_2a=\$LINENO - eval 'test \"x\$as_lineno_1'\$as_run'\" != \"x\$as_lineno_2'\$as_run'\" && -- test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1 --test \$(( 1 + 1 )) = 2 || exit 1" -+ test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1" - if (eval "$as_required") 2>/dev/null; then : - as_have_required=yes - else -@@ -583,50 +582,12 @@ - PACKAGE_URL= - - ac_unique_file="configure.base" --# Factoring default headers for most tests. --ac_includes_default="\ --#include --#ifdef HAVE_SYS_TYPES_H --# include --#endif --#ifdef HAVE_SYS_STAT_H --# include --#endif --#ifdef STDC_HEADERS --# include --# include --#else --# ifdef HAVE_STDLIB_H --# include --# endif --#endif --#ifdef HAVE_STRING_H --# if !defined STDC_HEADERS && defined HAVE_MEMORY_H --# include --# endif --# include --#endif --#ifdef HAVE_STRINGS_H --# include --#endif --#ifdef HAVE_INTTYPES_H --# include --#endif --#ifdef HAVE_STDINT_H --# include --#endif --#ifdef HAVE_UNISTD_H --# include --#endif" -- - ac_subst_vars='LTLIBOBJS - LIBOBJS - OCTCDF_CFLAGS - OCTCDF_LIBS - HAVE_NETCDF --EGREP --GREP --CPP -+NC_CONFIG - STRIP - COPY_FLAGS - RANLIB -@@ -643,6 +604,7 @@ - mpath - subver - ver -+OCTAVE_CONFIG - MKOCTFILE - OBJEXT - EXEEXT -@@ -710,8 +672,7 @@ - CFLAGS - LDFLAGS - LIBS --CPPFLAGS --CPP' -+CPPFLAGS' - - - # Initialize some variables set by options. -@@ -1334,7 +1295,6 @@ - LIBS libraries to pass to the linker, e.g. -l - CPPFLAGS (Objective) C/C++ preprocessor flags, e.g. -I if - you have headers in a nonstandard directory -- CPP C preprocessor - - Use these variables to override the choices made by `configure' or to help - it to find libraries and programs with nonstandard names/locations. -@@ -1453,249 +1413,6 @@ - as_fn_set_status $ac_retval - - } # ac_fn_c_try_compile -- --# ac_fn_c_try_link LINENO --# ----------------------- --# Try to link conftest.$ac_ext, and return whether this succeeded. --ac_fn_c_try_link () --{ -- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack -- rm -f conftest.$ac_objext conftest$ac_exeext -- if { { ac_try="$ac_link" --case "(($ac_try" in -- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; -- *) ac_try_echo=$ac_try;; --esac --eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" --$as_echo "$ac_try_echo"; } >&5 -- (eval "$ac_link") 2>conftest.err -- ac_status=$? -- if test -s conftest.err; then -- grep -v '^ *+' conftest.err >conftest.er1 -- cat conftest.er1 >&5 -- mv -f conftest.er1 conftest.err -- fi -- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 -- test $ac_status = 0; } && { -- test -z "$ac_c_werror_flag" || -- test ! -s conftest.err -- } && test -s conftest$ac_exeext && { -- test "$cross_compiling" = yes || -- test -x conftest$ac_exeext -- }; then : -- ac_retval=0 --else -- $as_echo "$as_me: failed program was:" >&5 --sed 's/^/| /' conftest.$ac_ext >&5 -- -- ac_retval=1 --fi -- # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information -- # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would -- # interfere with the next link command; also delete a directory that is -- # left behind by Apple's compiler. We do this before executing the actions. -- rm -rf conftest.dSYM conftest_ipa8_conftest.oo -- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno -- as_fn_set_status $ac_retval -- --} # ac_fn_c_try_link -- --# ac_fn_c_try_cpp LINENO --# ---------------------- --# Try to preprocess conftest.$ac_ext, and return whether this succeeded. --ac_fn_c_try_cpp () --{ -- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack -- if { { ac_try="$ac_cpp conftest.$ac_ext" --case "(($ac_try" in -- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; -- *) ac_try_echo=$ac_try;; --esac --eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" --$as_echo "$ac_try_echo"; } >&5 -- (eval "$ac_cpp conftest.$ac_ext") 2>conftest.err -- ac_status=$? -- if test -s conftest.err; then -- grep -v '^ *+' conftest.err >conftest.er1 -- cat conftest.er1 >&5 -- mv -f conftest.er1 conftest.err -- fi -- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 -- test $ac_status = 0; } > conftest.i && { -- test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" || -- test ! -s conftest.err -- }; then : -- ac_retval=0 --else -- $as_echo "$as_me: failed program was:" >&5 --sed 's/^/| /' conftest.$ac_ext >&5 -- -- ac_retval=1 --fi -- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno -- as_fn_set_status $ac_retval -- --} # ac_fn_c_try_cpp -- --# ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES --# ------------------------------------------------------- --# Tests whether HEADER exists, giving a warning if it cannot be compiled using --# the include files in INCLUDES and setting the cache variable VAR --# accordingly. --ac_fn_c_check_header_mongrel () --{ -- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack -- if eval \${$3+:} false; then : -- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5 --$as_echo_n "checking for $2... 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What about this header? --case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in #(( -- yes:no: ) -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&5 --$as_echo "$as_me: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5 --$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;} -- ;; -- no:yes:* ) -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: present but cannot be compiled" >&5 --$as_echo "$as_me: WARNING: $2: present but cannot be compiled" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: check for missing prerequisite headers?" >&5 --$as_echo "$as_me: WARNING: $2: check for missing prerequisite headers?" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: see the Autoconf documentation" >&5 --$as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&5 --$as_echo "$as_me: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5 --$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;} -- ;; --esac -- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5 --$as_echo_n "checking for $2... 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Assumes --# that executables *can* be run. --ac_fn_c_try_run () --{ -- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack -- if { { ac_try="$ac_link" --case "(($ac_try" in -- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; -- *) ac_try_echo=$ac_try;; --esac --eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" --$as_echo "$ac_try_echo"; } >&5 -- (eval "$ac_link") 2>&5 -- ac_status=$? -- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 -- test $ac_status = 0; } && { ac_try='./conftest$ac_exeext' -- { { case "(($ac_try" in -- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;; -- *) ac_try_echo=$ac_try;; --esac --eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\"" --$as_echo "$ac_try_echo"; } >&5 -- (eval "$ac_try") 2>&5 -- ac_status=$? -- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5 -- test $ac_status = 0; }; }; then : -- ac_retval=0 --else -- $as_echo "$as_me: program exited with status $ac_status" >&5 -- $as_echo "$as_me: failed program was:" >&5 --sed 's/^/| /' conftest.$ac_ext >&5 -- -- ac_retval=$ac_status --fi -- rm -rf conftest.dSYM conftest_ipa8_conftest.oo -- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno -- as_fn_set_status $ac_retval -- --} # ac_fn_c_try_run -- --# ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES --# ------------------------------------------------------- --# Tests whether HEADER exists and can be compiled using the include files in --# INCLUDES, setting the cache variable VAR accordingly. --ac_fn_c_check_header_compile () --{ -- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack -- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5 --$as_echo_n "checking for $2... " >&6; } --if eval \${$3+:} false; then : -- $as_echo_n "(cached) " >&6 --else -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --$4 --#include <$2> --_ACEOF --if ac_fn_c_try_compile "$LINENO"; then : -- eval "$3=yes" --else -- eval "$3=no" --fi --rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext --fi --eval ac_res=\$$3 -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5 --$as_echo "$ac_res" >&6; } -- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno -- --} # ac_fn_c_check_header_compile - cat >config.log <<_ACEOF - This file contains any messages produced by compilers while - running configure, to aid debugging if configure makes a mistake. -@@ -2897,6 +2614,46 @@ - test -z "$MKOCTFILE" && { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: no mkoctfile found on path" >&5 - $as_echo "$as_me: WARNING: no mkoctfile found on path" >&2;} - -+# Extract the first word of "octave-config", so it can be a program name with args. -+set dummy octave-config; ac_word=$2 -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 -+$as_echo_n "checking for $ac_word... " >&6; } -+if ${ac_cv_prog_OCTAVE_CONFIG+:} false; then : -+ $as_echo_n "(cached) " >&6 -+else -+ if test -n "$OCTAVE_CONFIG"; then -+ ac_cv_prog_OCTAVE_CONFIG="$OCTAVE_CONFIG" # Let the user override the test. -+else -+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR -+for as_dir in $PATH -+do -+ IFS=$as_save_IFS -+ test -z "$as_dir" && as_dir=. -+ for ac_exec_ext in '' $ac_executable_extensions; do -+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then -+ ac_cv_prog_OCTAVE_CONFIG="octave-config" -+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5 -+ break 2 -+ fi -+done -+ done -+IFS=$as_save_IFS -+ -+fi -+fi -+OCTAVE_CONFIG=$ac_cv_prog_OCTAVE_CONFIG -+if test -n "$OCTAVE_CONFIG"; then -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OCTAVE_CONFIG" >&5 -+$as_echo "$OCTAVE_CONFIG" >&6; } -+else -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -+$as_echo "no" >&6; } -+fi -+ -+ -+test -z "$OCTAVE_CONFIG" && { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: no octave-config found on path" >&5 -+$as_echo "$as_me: WARNING: no octave-config found on path" >&2;} -+ - - - -@@ -3083,6 +2840,8 @@ - - - -+ -+ - # Extract the first word of "octave", so it can be a program name with args. - set dummy octave; ac_word=$2 - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 -@@ -3120,25 +2879,25 @@ - fi - - --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for OCTAVE_VERSION in Octave" >&5 --$as_echo_n "checking for OCTAVE_VERSION in Octave... " >&6; } --OCTAVE_VERSION=`echo "disp(OCTAVE_VERSION)" | $OCTAVE -qf` -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for VERSION in octave-config" >&5 -+$as_echo_n "checking for VERSION in octave-config... " >&6; } -+OCTAVE_VERSION=`$OCTAVE_CONFIG -p VERSION` - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OCTAVE_VERSION" >&5 - $as_echo "$OCTAVE_VERSION" >&6; } - - - --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for octave_config_info('canonical_host_type') in Octave" >&5 --$as_echo_n "checking for octave_config_info('canonical_host_type') in Octave... " >&6; } --canonical_host_type=`echo "disp(octave_config_info('canonical_host_type'))" | $OCTAVE -qf` -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for CANONICAL_HOST_TYPE in octave-config" >&5 -+$as_echo_n "checking for CANONICAL_HOST_TYPE in octave-config... " >&6; } -+canonical_host_type=`$OCTAVE_CONFIG -p CANONICAL_HOST_TYPE` - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $canonical_host_type" >&5 - $as_echo "$canonical_host_type" >&6; } - - - --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for octave_config_info('SHLEXT') in Octave" >&5 --$as_echo_n "checking for octave_config_info('SHLEXT') in Octave... " >&6; } --SHLEXT=`echo "disp(octave_config_info('SHLEXT'))" | $OCTAVE -qf` -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for SHLEXT in octave-config" >&5 -+$as_echo_n "checking for SHLEXT in octave-config... " >&6; } -+SHLEXT=`$OCTAVE_CONFIG -p SHLEXT` - { $as_echo "$as_me:${as_lineno-$LINENO}: result: $SHLEXT" >&5 - $as_echo "$SHLEXT" >&6; } - -@@ -3306,489 +3065,105 @@ - ;; - esac - -- --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for nc-config" >&5 --$as_echo_n "checking for nc-config... " >&6; } -- --if nc-config --version > /dev/null 2>&1; then -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 --$as_echo "yes" >&6; } -- OCTCDF_LIBS="$OCTCDF_LIBS `nc-config --libs`" -- OCTCDF_CFLAGS="$OCTCDF_CFLAGS `nc-config --cflags`" -- HAVE_NETCDF=yes --else -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 --$as_echo "no" >&6; } -- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for nc-dap" >&5 --$as_echo_n "checking for nc-dap... " >&6; } -- -- if ncdap-config --version > /dev/null 2>&1; then -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 --$as_echo "yes" >&6; } -- OCTCDF_LIBS="$OCTCDF_LIBS `ncdap-config --libs`" -- OCTCDF_CFLAGS="$OCTCDF_CFLAGS `ncdap-config --cflags`" -- -- HAVE_NETCDF=yes -- else -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 --$as_echo "no" >&6; } -- -- -- --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for nc_open in -lnetcdf" >&5 --$as_echo_n "checking for nc_open in -lnetcdf... " >&6; } --if ${ac_cv_lib_netcdf_nc_open+:} false; then : -+if test -n "$ac_tool_prefix"; then -+ # Extract the first word of "${ac_tool_prefix}nc-config", so it can be a program name with args. -+set dummy ${ac_tool_prefix}nc-config; ac_word=$2 -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 -+$as_echo_n "checking for $ac_word... " >&6; } -+if ${ac_cv_prog_NC_CONFIG+:} false; then : - $as_echo_n "(cached) " >&6 - else -- ac_check_lib_save_LIBS=$LIBS --LIBS="-lnetcdf $LIBS" --cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ -- --/* Override any GCC internal prototype to avoid an error. -- Use char because int might match the return type of a GCC -- builtin and then its argument prototype would still apply. */ --#ifdef __cplusplus --extern "C" --#endif --char nc_open (); --int --main () --{ --return nc_open (); -- ; -- return 0; --} --_ACEOF --if ac_fn_c_try_link "$LINENO"; then : -- ac_cv_lib_netcdf_nc_open=yes --else -- ac_cv_lib_netcdf_nc_open=no --fi --rm -f core conftest.err conftest.$ac_objext \ -- conftest$ac_exeext conftest.$ac_ext --LIBS=$ac_check_lib_save_LIBS --fi --{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_netcdf_nc_open" >&5 --$as_echo "$ac_cv_lib_netcdf_nc_open" >&6; } --if test "x$ac_cv_lib_netcdf_nc_open" = xyes; then : -- HAVE_NETCDF=yes -+ if test -n "$NC_CONFIG"; then -+ ac_cv_prog_NC_CONFIG="$NC_CONFIG" # Let the user override the test. - else -- HAVE_NETCDF=no --fi -- -- -- if test $HAVE_NETCDF = yes ; then -- OCTCDF_LIBS="$OCTCDF_LIBS -lnetcdf" -- -- -- ac_ext=c --ac_cpp='$CPP $CPPFLAGS' --ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' --ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_c_compiler_gnu --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C preprocessor" >&5 --$as_echo_n "checking how to run the C preprocessor... " >&6; } --# On Suns, sometimes $CPP names a directory. --if test -n "$CPP" && test -d "$CPP"; then -- CPP= --fi --if test -z "$CPP"; then -- if ${ac_cv_prog_CPP+:} false; then : -- $as_echo_n "(cached) " >&6 --else -- # Double quotes because CPP needs to be expanded -- for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp" -- do -- ac_preproc_ok=false --for ac_c_preproc_warn_flag in '' yes -+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR -+for as_dir in $PATH - do -- # Use a header file that comes with gcc, so configuring glibc -- # with a fresh cross-compiler works. -- # Prefer to if __STDC__ is defined, since -- # exists even on freestanding compilers. -- # On the NeXT, cc -E runs the code through the compiler's parser, -- # not just through cpp. "Syntax error" is here to catch this case. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#ifdef __STDC__ --# include --#else --# include --#endif -- Syntax error --_ACEOF --if ac_fn_c_try_cpp "$LINENO"; then : -- --else -- # Broken: fails on valid input. --continue --fi --rm -f conftest.err conftest.i conftest.$ac_ext -- -- # OK, works on sane cases. Now check whether nonexistent headers -- # can be detected and how. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include --_ACEOF --if ac_fn_c_try_cpp "$LINENO"; then : -- # Broken: success on invalid input. --continue --else -- # Passes both tests. --ac_preproc_ok=: --break --fi --rm -f conftest.err conftest.i conftest.$ac_ext -- -+ IFS=$as_save_IFS -+ test -z "$as_dir" && as_dir=. -+ for ac_exec_ext in '' $ac_executable_extensions; do -+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then -+ ac_cv_prog_NC_CONFIG="${ac_tool_prefix}nc-config" -+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5 -+ break 2 -+ fi - done --# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped. --rm -f conftest.i conftest.err conftest.$ac_ext --if $ac_preproc_ok; then : -- break --fi -- -- done -- ac_cv_prog_CPP=$CPP -+ done -+IFS=$as_save_IFS - - fi -- CPP=$ac_cv_prog_CPP --else -- ac_cv_prog_CPP=$CPP --fi --{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CPP" >&5 --$as_echo "$CPP" >&6; } --ac_preproc_ok=false --for ac_c_preproc_warn_flag in '' yes --do -- # Use a header file that comes with gcc, so configuring glibc -- # with a fresh cross-compiler works. -- # Prefer to if __STDC__ is defined, since -- # exists even on freestanding compilers. -- # On the NeXT, cc -E runs the code through the compiler's parser, -- # not just through cpp. "Syntax error" is here to catch this case. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#ifdef __STDC__ --# include --#else --# include --#endif -- Syntax error --_ACEOF --if ac_fn_c_try_cpp "$LINENO"; then : -- --else -- # Broken: fails on valid input. --continue - fi --rm -f conftest.err conftest.i conftest.$ac_ext -- -- # OK, works on sane cases. Now check whether nonexistent headers -- # can be detected and how. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include --_ACEOF --if ac_fn_c_try_cpp "$LINENO"; then : -- # Broken: success on invalid input. --continue -+NC_CONFIG=$ac_cv_prog_NC_CONFIG -+if test -n "$NC_CONFIG"; then -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $NC_CONFIG" >&5 -+$as_echo "$NC_CONFIG" >&6; } - else -- # Passes both tests. --ac_preproc_ok=: --break -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -+$as_echo "no" >&6; } - fi --rm -f conftest.err conftest.i conftest.$ac_ext - --done --# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped. --rm -f conftest.i conftest.err conftest.$ac_ext --if $ac_preproc_ok; then : - --else -- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5 --$as_echo "$as_me: error: in \`$ac_pwd':" >&2;} --as_fn_error $? "C preprocessor \"$CPP\" fails sanity check --See \`config.log' for more details" "$LINENO" 5; } - fi -- --ac_ext=c --ac_cpp='$CPP $CPPFLAGS' --ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' --ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_c_compiler_gnu -- -- --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5 --$as_echo_n "checking for grep that handles long lines and -e... " >&6; } --if ${ac_cv_path_GREP+:} false; then : -+if test -z "$ac_cv_prog_NC_CONFIG"; then -+ ac_ct_NC_CONFIG=$NC_CONFIG -+ # Extract the first word of "nc-config", so it can be a program name with args. -+set dummy nc-config; ac_word=$2 -+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 -+$as_echo_n "checking for $ac_word... " >&6; } -+if ${ac_cv_prog_ac_ct_NC_CONFIG+:} false; then : - $as_echo_n "(cached) " >&6 - else -- if test -z "$GREP"; then -- ac_path_GREP_found=false -- # Loop through the user's path and test for each of PROGNAME-LIST -- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR --for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin --do -- IFS=$as_save_IFS -- test -z "$as_dir" && as_dir=. -- for ac_prog in grep ggrep; do -- for ac_exec_ext in '' $ac_executable_extensions; do -- ac_path_GREP="$as_dir/$ac_prog$ac_exec_ext" -- as_fn_executable_p "$ac_path_GREP" || continue --# Check for GNU ac_path_GREP and select it if it is found. -- # Check for GNU $ac_path_GREP --case `"$ac_path_GREP" --version 2>&1` in --*GNU*) -- ac_cv_path_GREP="$ac_path_GREP" ac_path_GREP_found=:;; --*) -- ac_count=0 -- $as_echo_n 0123456789 >"conftest.in" -- while : -- do -- cat "conftest.in" "conftest.in" >"conftest.tmp" -- mv "conftest.tmp" "conftest.in" -- cp "conftest.in" "conftest.nl" -- $as_echo 'GREP' >> "conftest.nl" -- "$ac_path_GREP" -e 'GREP$' -e '-(cannot match)-' < "conftest.nl" >"conftest.out" 2>/dev/null || break -- diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break -- as_fn_arith $ac_count + 1 && ac_count=$as_val -- if test $ac_count -gt ${ac_path_GREP_max-0}; then -- # Best one so far, save it but keep looking for a better one -- ac_cv_path_GREP="$ac_path_GREP" -- ac_path_GREP_max=$ac_count -- fi -- # 10*(2^10) chars as input seems more than enough -- test $ac_count -gt 10 && break -- done -- rm -f conftest.in conftest.tmp conftest.nl conftest.out;; --esac -- -- $ac_path_GREP_found && break 3 -- done -- done -- done --IFS=$as_save_IFS -- if test -z "$ac_cv_path_GREP"; then -- as_fn_error $? "no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5 -- fi --else -- ac_cv_path_GREP=$GREP --fi -- --fi --{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_GREP" >&5 --$as_echo "$ac_cv_path_GREP" >&6; } -- GREP="$ac_cv_path_GREP" -- -- --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5 --$as_echo_n "checking for egrep... " >&6; } --if ${ac_cv_path_EGREP+:} false; then : -- $as_echo_n "(cached) " >&6 -+ if test -n "$ac_ct_NC_CONFIG"; then -+ ac_cv_prog_ac_ct_NC_CONFIG="$ac_ct_NC_CONFIG" # Let the user override the test. - else -- if echo a | $GREP -E '(a|b)' >/dev/null 2>&1 -- then ac_cv_path_EGREP="$GREP -E" -- else -- if test -z "$EGREP"; then -- ac_path_EGREP_found=false -- # Loop through the user's path and test for each of PROGNAME-LIST -- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR --for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin -+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR -+for as_dir in $PATH - do - IFS=$as_save_IFS - test -z "$as_dir" && as_dir=. -- for ac_prog in egrep; do - for ac_exec_ext in '' $ac_executable_extensions; do -- ac_path_EGREP="$as_dir/$ac_prog$ac_exec_ext" -- as_fn_executable_p "$ac_path_EGREP" || continue --# Check for GNU ac_path_EGREP and select it if it is found. -- # Check for GNU $ac_path_EGREP --case `"$ac_path_EGREP" --version 2>&1` in --*GNU*) -- ac_cv_path_EGREP="$ac_path_EGREP" ac_path_EGREP_found=:;; --*) -- ac_count=0 -- $as_echo_n 0123456789 >"conftest.in" -- while : -- do -- cat "conftest.in" "conftest.in" >"conftest.tmp" -- mv "conftest.tmp" "conftest.in" -- cp "conftest.in" "conftest.nl" -- $as_echo 'EGREP' >> "conftest.nl" -- "$ac_path_EGREP" 'EGREP$' < "conftest.nl" >"conftest.out" 2>/dev/null || break -- diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break -- as_fn_arith $ac_count + 1 && ac_count=$as_val -- if test $ac_count -gt ${ac_path_EGREP_max-0}; then -- # Best one so far, save it but keep looking for a better one -- ac_cv_path_EGREP="$ac_path_EGREP" -- ac_path_EGREP_max=$ac_count -- fi -- # 10*(2^10) chars as input seems more than enough -- test $ac_count -gt 10 && break -- done -- rm -f conftest.in conftest.tmp conftest.nl conftest.out;; --esac -- -- $ac_path_EGREP_found && break 3 -- done -- done -+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then -+ ac_cv_prog_ac_ct_NC_CONFIG="nc-config" -+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5 -+ break 2 -+ fi -+done - done - IFS=$as_save_IFS -- if test -z "$ac_cv_path_EGREP"; then -- as_fn_error $? "no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5 -- fi --else -- ac_cv_path_EGREP=$EGREP --fi -- -- fi --fi --{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_EGREP" >&5 --$as_echo "$ac_cv_path_EGREP" >&6; } -- EGREP="$ac_cv_path_EGREP" -- - --{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5 --$as_echo_n "checking for ANSI C header files... " >&6; } --if ${ac_cv_header_stdc+:} false; then : -- $as_echo_n "(cached) " >&6 --else -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include --#include --#include --#include -- --int --main () --{ -- -- ; -- return 0; --} --_ACEOF --if ac_fn_c_try_compile "$LINENO"; then : -- ac_cv_header_stdc=yes --else -- ac_cv_header_stdc=no --fi --rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext -- --if test $ac_cv_header_stdc = yes; then -- # SunOS 4.x string.h does not declare mem*, contrary to ANSI. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include -- --_ACEOF --if (eval "$ac_cpp conftest.$ac_ext") 2>&5 | -- $EGREP "memchr" >/dev/null 2>&1; then : -- --else -- ac_cv_header_stdc=no - fi --rm -f conftest* -- - fi -- --if test $ac_cv_header_stdc = yes; then -- # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI. -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include -- --_ACEOF --if (eval "$ac_cpp conftest.$ac_ext") 2>&5 | -- $EGREP "free" >/dev/null 2>&1; then : -- -+ac_ct_NC_CONFIG=$ac_cv_prog_ac_ct_NC_CONFIG -+if test -n "$ac_ct_NC_CONFIG"; then -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_NC_CONFIG" >&5 -+$as_echo "$ac_ct_NC_CONFIG" >&6; } - else -- ac_cv_header_stdc=no --fi --rm -f conftest* -- -+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 -+$as_echo "no" >&6; } - fi - --if test $ac_cv_header_stdc = yes; then -- # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi. -- if test "$cross_compiling" = yes; then : -- : --else -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ --#include --#include --#if ((' ' & 0x0FF) == 0x020) --# define ISLOWER(c) ('a' <= (c) && (c) <= 'z') --# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) --#else --# define ISLOWER(c) \ -- (('a' <= (c) && (c) <= 'i') \ -- || ('j' <= (c) && (c) <= 'r') \ -- || ('s' <= (c) && (c) <= 'z')) --# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c)) --#endif -- --#define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) --int --main () --{ -- int i; -- for (i = 0; i < 256; i++) -- if (XOR (islower (i), ISLOWER (i)) -- || toupper (i) != TOUPPER (i)) -- return 2; -- return 0; --} --_ACEOF --if ac_fn_c_try_run "$LINENO"; then : -- -+ if test "x$ac_ct_NC_CONFIG" = x; then -+ NC_CONFIG="nc-config" -+ else -+ case $cross_compiling:$ac_tool_warned in -+yes:) -+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5 -+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;} -+ac_tool_warned=yes ;; -+esac -+ NC_CONFIG=$ac_ct_NC_CONFIG -+ fi - else -- ac_cv_header_stdc=no --fi --rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ -- conftest.$ac_objext conftest.beam conftest.$ac_ext --fi -- --fi --fi --{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5 --$as_echo "$ac_cv_header_stdc" >&6; } --if test $ac_cv_header_stdc = yes; then -- --$as_echo "#define STDC_HEADERS 1" >>confdefs.h -- --fi -- --# On IRIX 5.3, sys/types and inttypes.h are conflicting. --for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \ -- inttypes.h stdint.h unistd.h --do : -- as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh` --ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default --" --if eval test \"x\$"$as_ac_Header"\" = x"yes"; then : -- cat >>confdefs.h <<_ACEOF --#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1 --_ACEOF -- -+ NC_CONFIG="$ac_cv_prog_NC_CONFIG" - fi - --done -- - --ac_fn_c_check_header_mongrel "$LINENO" "netcdf.h" "ac_cv_header_netcdf_h" "$ac_includes_default" --if test "x$ac_cv_header_netcdf_h" = xyes; then : -- HAVE_NETCDF=yes -+OCTCDF_LIBS="$OCTCDF_LIBS `$NC_CONFIG --libs`" -+OCTCDF_CFLAGS="$OCTCDF_CFLAGS `$NC_CONFIG --cflags`" -+if test -z "$NC_CONFIG"; then -+as_fn_error 1 "nc-config not found" "$LINENO" 5; - else -- HAVE_NETCDF=no --fi -- -- -- fi -- fi -+ HAVE_NETCDF=yes - fi - - -@@ -3820,6 +3195,7 @@ - octave-forge is configured with - octave: $OCTAVE (version $OCTAVE_VERSION) - mkoctfile: $MKOCTFILE for Octave $subver -+ octave-config: $OCTAVE_CONFIG for Octave $subver - octcdf toolbox: $OCTCDFSTATUS - netCDF compiler flags: $OCTCDF_CFLAGS - netCDF libraries: $OCTCDF_LIBS" -diff -ur octcdf.orig/src/configure.base octcdf/src/configure.base ---- octcdf.orig/src/configure.base 2015-04-14 11:21:17.161247377 -0400 -+++ octcdf/src/configure.base 2015-04-14 11:22:37.730853787 -0400 -@@ -50,6 +50,9 @@ - AC_CHECK_PROG(MKOCTFILE,mkoctfile,mkoctfile) - test -z "$MKOCTFILE" && AC_MSG_WARN([no mkoctfile found on path]) - -+AC_CHECK_PROG(OCTAVE_CONFIG,octave-config,octave-config) -+test -z "$OCTAVE_CONFIG" && AC_MSG_WARN([no octave-config found on path]) -+ - AC_SUBST(ver) - AC_SUBST(subver) - AC_SUBST(mpath) -@@ -267,15 +270,22 @@ - fi - ]) - -+AC_DEFUN(OCTAVE_CONFIG_EVAL, -+[AC_MSG_CHECKING([for $1 in octave-config]) -+$2=`$OCTAVE_CONFIG -p $1` -+AC_MSG_RESULT($$2) -+AC_SUBST($2) -+]) -+ - dnl should check that $(OCTAVE) --version matches $(MKOCTFILE) --version - AC_CHECK_PROG(OCTAVE,octave,octave) --OCTAVE_EVAL(OCTAVE_VERSION,OCTAVE_VERSION) -+OCTAVE_CONFIG_EVAL(VERSION,OCTAVE_VERSION) - - dnl grab canonical host type so we can write system specific install stuff --OCTAVE_EVAL(octave_config_info('canonical_host_type'),canonical_host_type) -+OCTAVE_CONFIG_EVAL(CANONICAL_HOST_TYPE,canonical_host_type) - - dnl grab SHLEXT from octave config --OCTAVE_EVAL(octave_config_info('SHLEXT'),SHLEXT) -+OCTAVE_CONFIG_EVAL(SHLEXT,SHLEXT) - - AC_PROG_LN_S - -@@ -308,44 +318,17 @@ - ;; - esac - --dnl first checking for nc-config, then nc-dap -- --AC_MSG_CHECKING([for nc-config]) -+dnl check for nc-config -+AC_CHECK_TOOL(NC_CONFIG, nc-config, nc-config) - --if nc-config --version > /dev/null 2>&1; then -- AC_MSG_RESULT([yes]) -- OCTCDF_LIBS="$OCTCDF_LIBS `nc-config --libs`" -- OCTCDF_CFLAGS="$OCTCDF_CFLAGS `nc-config --cflags`" -- HAVE_NETCDF=yes -+OCTCDF_LIBS="$OCTCDF_LIBS `$NC_CONFIG --libs`" -+OCTCDF_CFLAGS="$OCTCDF_CFLAGS `$NC_CONFIG --cflags`" -+if test -z "$NC_CONFIG"; then -+AC_MSG_ERROR([nc-config not found], 1); - else -- AC_MSG_RESULT([no]) -- AC_MSG_CHECKING([for nc-dap]) -- -- if ncdap-config --version > /dev/null 2>&1; then -- AC_MSG_RESULT([yes]) -- OCTCDF_LIBS="$OCTCDF_LIBS `ncdap-config --libs`" -- OCTCDF_CFLAGS="$OCTCDF_CFLAGS `ncdap-config --cflags`" -- -- HAVE_NETCDF=yes -- else -- AC_MSG_RESULT([no]) -- -- dnl if no opendap, checking if the NetCDF library exists. -- dnl AC_CHECK_LIB takes the value of LDFLAGS into account -- -- AC_CHECK_LIB(netcdf,nc_open, HAVE_NETCDF=yes, HAVE_NETCDF=no,) -- -- if test $HAVE_NETCDF = yes ; then -- OCTCDF_LIBS="$OCTCDF_LIBS -lnetcdf" -- -- dnl we have the libraries, no we have also the headers? -- dnl AC_CHECK_HEADER takes the value of CPPFLAGS into account -- -- AC_CHECK_HEADER(netcdf.h, HAVE_NETCDF=yes, HAVE_NETCDF=no) -- fi -- fi -+ HAVE_NETCDF=yes - fi -- -+ - AC_SUBST(HAVE_NETCDF) - AC_SUBST(OCTCDF_LIBS) - AC_SUBST(OCTCDF_CFLAGS) -@@ -375,6 +358,7 @@ - octave-forge is configured with - octave: $OCTAVE (version $OCTAVE_VERSION) - mkoctfile: $MKOCTFILE for Octave $subver -+ octave-config: $OCTAVE_CONFIG for Octave $subver - octcdf toolbox: $OCTCDFSTATUS - netCDF compiler flags: $OCTCDF_CFLAGS - netCDF libraries: $OCTCDF_LIBS" -diff -ur octcdf.orig/src/Makeconf.in octcdf/src/Makeconf.in ---- octcdf.orig/src/Makeconf.in 2015-04-14 11:21:17.161247377 -0400 -+++ octcdf/src/Makeconf.in 2015-04-14 11:21:33.423571620 -0400 -@@ -53,6 +53,8 @@ - OCTAVE_VERSION = @OCTAVE_VERSION@ - MKOCTFILE = @MKOCTFILE@ -DHAVE_OCTAVE_$(ver) -v - SHLEXT = @SHLEXT@ -+NC_CONFIG = @NC_CONFIG@ -+OCTAVE_CONFIG = @OCTAVE_CONFIG@ - - HAVE_NETCDF=@HAVE_NETCDF@ - OCTCDF_LIBS=@OCTCDF_LIBS@ -diff -ur octcdf.orig/src/configure octcdf/src/configure ---- octcdf.orig/src/configure 2015-11-25 08:22:54.216927907 -0500 -+++ octcdf/src/configure 2015-11-25 08:43:20.679996250 -0500 -@@ -2887,6 +2887,11 @@ - - - -+oct_ver=`echo $OCTAVE_VERSION | sed -e "s/\.//" -e "s/\..*$//"` -+if test "$oct_ver" -ge "40" ; then -+ OCTCDF_CFLAGS="$OCTCDF_CFLAGS -DOV_REP_TYPE=octave_base_value" -+fi -+ - { $as_echo "$as_me:${as_lineno-$LINENO}: checking for CANONICAL_HOST_TYPE in octave-config" >&5 - $as_echo_n "checking for CANONICAL_HOST_TYPE in octave-config... " >&6; } - canonical_host_type=`$OCTAVE_CONFIG -p CANONICAL_HOST_TYPE` -diff -ur octcdf.orig/src/configure.base octcdf/src/configure.base ---- octcdf.orig/src/configure.base 2015-11-25 08:22:54.215927888 -0500 -+++ octcdf/src/configure.base 2015-11-25 08:43:05.311695338 -0500 -@@ -281,6 +281,11 @@ - AC_CHECK_PROG(OCTAVE,octave,octave) - OCTAVE_CONFIG_EVAL(VERSION,OCTAVE_VERSION) - -+oct_ver=`echo $OCTAVE_VERSION | sed -e "s/\.//" -e "s/\..*$//"` -+if test "$ocvt_ver" -ge "40" ; then -+ OCTCDF_CFLAGS="$OCTCDF_CFLAGS -DOV_REP_TYPE=octave_base_value" -+fi -+ - dnl grab canonical host type so we can write system specific install stuff - OCTAVE_CONFIG_EVAL(CANONICAL_HOST_TYPE,canonical_host_type) - diff -r 4970d27d3e12 -r 6a33c32796b2 src/of-octcdf.mk --- a/src/of-octcdf.mk Sat Mar 19 10:00:08 2016 -0400 +++ b/src/of-octcdf.mk Sat Mar 19 10:05:23 2016 -0400 @@ -5,8 +5,8 @@ PKG := of-octcdf $(PKG)_IGNORE := -$(PKG)_VERSION := 1.1.8 -$(PKG)_CHECKSUM := 0550e4d5741d5e720d6ad8a42edc8c1a451f07e5 +$(PKG)_VERSION := 1.1.10 +$(PKG)_CHECKSUM := 96efa6d45fe79480d7de090e759f19d8324cfd21 $(PKG)_REMOTE_SUBDIR := $(PKG)_SUBDIR := octcdf $(PKG)_FILE := octcdf-$($(PKG)_VERSION).tar.gz