# HG changeset patch
# User gedeone-octave <marcovass89@hotmail.it>
# Date 1392735202 0
# Node ID b67de1926ed00ec65277d8beb7ee238d053b736c
# Parent  72633d939a816384220dd4372d2cd0ad713fa038
Change internal use of dolfin functions following new API of FEniCS 1.3.0

diff -r 72633d939a81 -r b67de1926ed0 src/Mesh.cc
--- a/src/Mesh.cc	Fri Jan 31 00:32:47 2014 +0100
+++ b/src/Mesh.cc	Tue Feb 18 14:53:22 2014 +0000
@@ -129,7 +129,7 @@
 
       // store information associated with e
       msh->init (D - 1);
-      dolfin::MeshValueCollection<std::size_t> facet (D - 1);
+      dolfin::MeshValueCollection<std::size_t> facet(*msh, D - 1);
       std::size_t num_side_edges = e.cols ();
 
       if (D == 2)
@@ -144,7 +144,9 @@
                       || (*f).entities(0)[0] == e.xelem (1, i) - 1
                       && (*f).entities(0)[1] == e.xelem (0, i) - 1)
                     {
-                      facet.set_value ((*f).index (), e.xelem (4, i), *msh);
+                      std::pair <std::size_t, std::size_t>
+                        idxvl ((*f).index (), e.xelem (4, i));
+                      msh->domains ().set_marker (idxvl, D - 1);
                       break;
                     }
                 }
@@ -179,17 +181,17 @@
                       && (*f).entities(0)[1] == e.xelem (1, i) - 1
                       && (*f).entities(0)[2] == e.xelem (0, i) - 1)
                     {
-                      facet.set_value ((*f).index (), e.xelem (9, i), *msh);
+                      std::pair <std::size_t, std::size_t> 
+                        idxvl ((*f).index (), e.xelem (9, i));
+                      msh->domains ().set_marker (idxvl, D - 1);
                       break;
                     }
                 }
             }
         }
 
-      *(msh->domains ().markers (D - 1)) = facet;
 
-      // store information associated with t
-      dolfin::MeshValueCollection<std::size_t> cell (D);
+      dolfin::MeshValueCollection<std::size_t> cell (*msh, D);
       std::size_t num_cells = t.cols ();
 
       if (D == 2)
@@ -218,7 +220,9 @@
                       && (*f).entities(0)[1] == t.xelem (1, i) - 1
                       && (*f).entities(0)[2] == t.xelem (0, i) - 1)
                     {
-                      cell.set_value ((*f).index (), t.xelem (3, i), *msh);
+                      std::pair <std::size_t, std::size_t>
+                        idxvl ((*f).index (), t.xelem (3, i));
+                      msh->domains ().set_marker (idxvl, D);
                       break;
                     }
                 }
@@ -334,15 +338,15 @@
                        && (*f).entities(0)[2] == t.xelem (1, i) - 1
                        && (*f).entities(0)[3] == t.xelem (0, i) - 1)
                     {
-                      cell.set_value ((*f).index (), t.xelem (4, i), *msh);
+                      std::pair <std::size_t, std::size_t>
+                        idxvl ((*f).index (), t.xelem (4, i));
+                      msh->domains ().set_marker (idxvl, D);
                       break;
                     }
                 }
             }
         }
 
-      *(msh->domains ().markers (D)) = cell;
-
      pmsh = msh;
     }
 }