view scripts/linear-algebra/logm.m @ 20160:03b9d17a2d95 stable

doc: Update more docstrings to have one sentence summary as first line. Reviewed io, java, linear-algebra, prefs, and set script directories. * scripts/io/beep.m, scripts/io/dlmwrite.m, scripts/io/importdata.m, scripts/io/strread.m, scripts/io/textread.m, scripts/java/javaArray.m, scripts/java/java_get.m, scripts/java/java_set.m, scripts/java/javaaddpath.m, scripts/java/javachk.m, scripts/java/javaclasspath.m, scripts/java/javamem.m, scripts/java/javarmpath.m, scripts/linear-algebra/bandwidth.m, scripts/linear-algebra/commutation_matrix.m, scripts/linear-algebra/cond.m, scripts/linear-algebra/condest.m, scripts/linear-algebra/cross.m, scripts/linear-algebra/duplication_matrix.m, scripts/linear-algebra/expm.m, scripts/linear-algebra/housh.m, scripts/linear-algebra/isdefinite.m, scripts/linear-algebra/ishermitian.m, scripts/linear-algebra/issymmetric.m, scripts/linear-algebra/istril.m, scripts/linear-algebra/istriu.m, scripts/linear-algebra/krylov.m, scripts/linear-algebra/logm.m, scripts/linear-algebra/normest.m, scripts/linear-algebra/null.m, scripts/linear-algebra/onenormest.m, scripts/linear-algebra/orth.m, scripts/linear-algebra/qzhess.m, scripts/linear-algebra/rank.m, scripts/linear-algebra/rref.m, scripts/linear-algebra/vech.m, scripts/path/matlabroot.m, scripts/prefs/addpref.m, scripts/prefs/getpref.m, scripts/prefs/ispref.m, scripts/prefs/rmpref.m, scripts/prefs/setpref.m, scripts/set/powerset.m, scripts/set/setdiff.m: Update more docstrings to have one sentence summary as first line.
author Rik <rik@octave.org>
date Sun, 03 May 2015 15:36:23 -0700
parents 9fc020886ae9
children
line wrap: on
line source

## Copyright (C) 2008-2015 N. J. Higham
## Copyright (C) 2010 Richard T. Guy
## Copyright (C) 2010 Marco Caliari
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn  {Function File} {@var{s} =} logm (@var{A})
## @deftypefnx {Function File} {@var{s} =} logm (@var{A}, @var{opt_iters})
## @deftypefnx {Function File} {[@var{s}, @var{iters}] =} logm (@dots{})
## Compute the matrix logarithm of the square matrix @var{A}.
##
## The implementation utilizes a Pad@'e approximant and the identity
##
## @example
## logm (@var{A}) = 2^k * logm (@var{A}^(1 / 2^k))
## @end example
##
## The optional input @var{opt_iters} is the maximum number of square roots
## to compute and defaults to 100.
##
## The optional output @var{iters} is the number of square roots actually
## computed.
## @seealso{expm, sqrtm}
## @end deftypefn

## Reference: N. J. Higham, Functions of Matrices: Theory and Computation
##            (SIAM, 2008.)
##

## Author: N. J. Higham
## Author: Richard T. Guy <guyrt7@wfu.edu>
## Author: Marco Caliari <marco.caliari@univr.it>

function [s, iters] = logm (A, opt_iters = 100)

  if (nargin == 0 || nargin > 2)
    print_usage ();
  endif

  if (! issquare (A))
    error ("logm: A must be a square matrix");
  endif

  if (isscalar (A))
    s = log (A);
    return;
  elseif (strfind (typeinfo (A), "diagonal matrix"))
    s = diag (log (diag (A)));
    return;
  endif

  [u, s] = schur (A);

  if (isreal (A))
    [u, s] = rsf2csf (u, s);
  endif

  eigv = diag (s);
  if (any (eigv < 0))
    warning ("Octave:logm:non-principal",
             "logm: principal matrix logarithm is not defined for matrices with negative eigenvalues; computing non-principal logarithm");
  endif

  real_eig = all (eigv >= 0);

  k = 0;
  ## Algorithm 11.9 in "Function of matrices", by N. Higham
  theta = [0, 0, 1.61e-2, 5.38e-2, 1.13e-1, 1.86e-1, 2.6429608311114350e-1];
  p = 0;
  m = 7;
  while (k < opt_iters)
    tau = norm (s - eye (size (s)),1);
    if (tau <= theta (7))
      p = p + 1;
      j(1) = find (tau <= theta, 1);
      j(2) = find (tau / 2 <= theta, 1);
      if (j(1) - j(2) <= 1 || p == 2)
        m = j(1);
        break
      endif
    endif
    k = k + 1;
    s = sqrtm (s);
  endwhile

  if (k >= opt_iters)
    warning ("logm: maximum number of square roots exceeded; results may still be accurate");
  endif

  s = s - eye (size (s));

  if (m > 1)
    s = logm_pade_pf (s, m);
  endif

  s = 2^k * u * s * u';

  ## Remove small complex values (O(eps)) which may have entered calculation
  if (real_eig && isreal (A))
    s = real (s);
  endif

  if (nargout == 2)
    iters = k;
  endif

endfunction

################## ANCILLARY FUNCTIONS ################################
######  Taken from the mfttoolbox (GPL 3) by D. Higham.
######  Reference:
######      D. Higham, Functions of Matrices: Theory and Computation
######      (SIAM, 2008.).
#######################################################################

##LOGM_PADE_PF   Evaluate Pade approximant to matrix log by partial fractions.
##   Y = LOGM_PADE_PF(A,M) evaluates the [M/M] Pade approximation to
##   LOG(EYE(SIZE(A))+A) using a partial fraction expansion.

function s = logm_pade_pf (A, m)
  [nodes, wts] = gauss_legendre (m);
  ## Convert from [-1,1] to [0,1].
  nodes = (nodes+1)/2;
  wts = wts/2;

  n = length (A);
  s = zeros (n);
  for j = 1:m
    s += wts(j)*(A/(eye (n) + nodes(j)*A));
  endfor
endfunction

######################################################################
## GAUSS_LEGENDRE  Nodes and weights for Gauss-Legendre quadrature.
##   [X,W] = GAUSS_LEGENDRE(N) computes the nodes X and weights W
##   for N-point Gauss-Legendre quadrature.

## Reference:
## G. H. Golub and J. H. Welsch, Calculation of Gauss quadrature
## rules, Math. Comp., 23(106):221-230, 1969.

function [x, w] = gauss_legendre (n)
  i = 1:n-1;
  v = i./sqrt ((2*i).^2-1);
  [V, D] = eig (diag (v, -1) + diag (v, 1));
  x = diag (D);
  w = 2*(V(1,:)'.^2);
endfunction


%!assert (norm (logm ([1 -1;0 1]) - [0 -1; 0 0]) < 1e-5)
%!test
%! warning ("off", "Octave:logm:non-principal", "local");
%! assert (norm (expm (logm ([-1 2 ; 4 -1])) - [-1 2 ; 4 -1]) < 1e-5);
%!assert (logm ([1 -1 -1;0 1 -1; 0 0 1]), [0 -1 -1.5; 0 0 -1; 0 0 0], 1e-5)
%!assert (logm (10), log (10))
%!assert (full (logm (eye (3))), logm (full (eye (3))))
%!assert (full (logm (10*eye (3))), logm (full (10*eye (3))), 8*eps)
%!assert (logm (expm ([0 1i; -1i 0])), [0 1i; -1i 0], 10 * eps)

## Test input validation
%!error logm ()
%!error logm (1, 2, 3)
%!error <logm: A must be a square matrix> logm ([1 0;0 1; 2 2])