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update Octave Project Developers copyright for the new year In files that have the "Octave Project Developers" copyright notice, update for 2021. In all .txi and .texi files except gpl.txi and gpl.texi in the doc/liboctave and doc/interpreter directories, change the copyright to "Octave Project Developers", the same as used for other source files. Update copyright notices for 2022 (not done since 2019). For gpl.txi and gpl.texi, change the copyright notice to be "Free Software Foundation, Inc." and leave the date at 2007 only because this file only contains the text of the GPL, not anything created by the Octave Project Developers. Add Paul Thomas to contributors.in.
author John W. Eaton <jwe@octave.org>
date Tue, 28 Dec 2021 18:22:40 -0500
parents 7854d5752dd2
children e1788b1a315f
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########################################################################
##
## Copyright (C) 2016-2022 The Octave Project Developers
##
## See the file COPYRIGHT.md in the top-level directory of this
## distribution or <https://octave.org/copyright/>.
##
## This file is part of Octave.
##
## Octave is free software: you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation, either version 3 of the License, or
## (at your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <https://www.gnu.org/licenses/>.
##
########################################################################

## -*- texinfo -*-
## @deftypefn  {} {[@var{y0_new}, @var{yp0_new}] =} decic (@var{fun}, @var{t0}, @var{y0}, @var{fixed_y0}, @var{yp0}, @var{fixed_yp0})
## @deftypefnx {} {[@var{y0_new}, @var{yp0_new}] =} decic (@var{fun}, @var{t0}, @var{y0}, @var{fixed_y0}, @var{yp0}, @var{fixed_yp0}, @var{options})
## @deftypefnx {} {[@var{y0_new}, @var{yp0_new}, @var{resnorm}] =} decic (@dots{})
##
## Compute consistent implicit ODE initial conditions @var{y0_new} and
## @var{yp0_new} given initial guesses @var{y0} and @var{yp0}.
##
## A maximum of @code{length (@var{y0})} components between @var{fixed_y0} and
## @var{fixed_yp0} may be chosen as fixed values.
##
## @var{fun} is a function handle.  The function must accept three inputs where
## the first is time @var{t}, the second is a column vector of unknowns
## @var{y}, and the third is a column vector of unknowns @var{yp}.
##
## @var{t0} is the initial time such that
## @code{@var{fun}(@var{t0}, @var{y0_new}, @var{yp0_new}) = 0}, specified as a
## scalar.
##
## @var{y0} is a vector used as the initial guess for @var{y}.
##
## @var{fixed_y0} is a vector which specifies the components of @var{y0} to
## hold fixed.  Choose a maximum of @code{length (@var{y0})} components between
## @var{fixed_y0} and @var{fixed_yp0} as fixed values.
## Set @var{fixed_y0}(i) component to 1 if you want to fix the value of
## @var{y0}(i).
## Set @var{fixed_y0}(i) component to 0 if you want to allow the value of
## @var{y0}(i) to change.
##
## @var{yp0} is a vector used as the initial guess for @var{yp}.
##
## @var{fixed_yp0} is a vector which specifies the components of @var{yp0} to
## hold fixed.  Choose a maximum of @code{length (@var{yp0})} components
## between @var{fixed_y0} and @var{fixed_yp0} as fixed values.
## Set @var{fixed_yp0}(i) component to 1 if you want to fix the value of
## @var{yp0}(i).
## Set @var{fixed_yp0}(i) component to 0 if you want to allow the value of
## @var{yp0}(i) to change.
##
## The optional seventh argument @var{options} is a structure array.  Use
## @code{odeset} to generate this structure.  The relevant options are
## @code{RelTol} and @code{AbsTol} which specify the error thresholds used to
## compute the initial conditions.
##
## The function typically returns two outputs.  Variable @var{y0_new} is a
## column vector and contains the consistent initial value of @var{y}.  The
## output @var{yp0_new} is a column vector and contains the consistent initial
## value of @var{yp}.
##
## The optional third output @var{resnorm} is the norm of the vector of
## residuals.  If @var{resnorm} is small, @code{decic} has successfully
## computed the initial conditions.  If the value of @var{resnorm} is large,
## use @code{RelTol} and @code{AbsTol} to adjust it.
##
## Example: Compute initial conditions for @nospell{Robertson's} equations:
##
## @smallexample
## @group
## function r = robertson_dae (@var{t}, @var{y}, @var{yp})
##   r = [ -(@var{yp}(1) + 0.04*@var{y}(1) - 1e4*@var{y}(2)*@var{y}(3))
##         -(@var{yp}(2) - 0.04*@var{y}(1) + 1e4*@var{y}(2)*@var{y}(3) + 3e7*@var{y}(2)^2)
##        @var{y}(1) + @var{y}(2) + @var{y}(3) - 1 ];
## endfunction
## @end group
## [@var{y0_new},@var{yp0_new}] = decic (@@robertson_dae, 0, [1; 0; 0], [1; 1; 0],
## [-1e-4; 1; 0], [0; 0; 0]);
## @end smallexample
## @seealso{ode15i, odeset}
## @end deftypefn

function [y0_new, yp0_new, resnorm] = decic (fun, t0,
                                             y0, fixed_y0, yp0, fixed_yp0,
                                             options)

  if (nargin < 6)
    print_usage ();
  endif

  ## Validate inputs
  if (! is_function_handle (fun))
    error ("Octave:invalid-input-arg",
           "decic: FUN must be a valid function handle");
  endif

  if (! (isnumeric (t0) && isscalar (t0)))
    error ("Octave:invalid-input-arg",
           "decic: T0 must be a numeric scalar");
  endif

  if (   ! (isnumeric (y0) && isvector (y0))
      || ! (isnumeric (fixed_y0) && isvector (fixed_y0))
      || ! (isnumeric (yp0) && isvector (yp0))
      || ! (isnumeric (fixed_yp0) && isvector (fixed_yp0)))
   error ("Octave:invalid-input-arg",
          "decic: Y0, FIXED_Y0, YP0, and FIXED_YP0 must be numeric vectors");

  elseif (! isequal (numel (y0), numel (fixed_y0), numel (yp0),
                     numel (fixed_yp0)))
    error ("Octave:invalid-input-arg",
           "decic: length of Y0, FIXED_Y0, YP0, and FIXED_YP0 must be equal");
  endif

  ## FIXME: This level of checking isn't necessary
  for i = 1:numel (y0)
    if (! (fixed_y0(i) == 0 || fixed_y0(i) == 1) || ! (fixed_yp0(i) == 0
        || fixed_yp0(i) == 1))
      error ("Octave:invalid-input-arg",
             "decic: FIXED_Y0 and FIXED_YP0 must be boolean vectors");
    endif
  endfor

  n  = numel (y0);
  nl = sum (! fixed_y0);
  nu = sum (! fixed_yp0);

  if (n - nl - nu > 0)
    error ("Octave:invalid-input-arg",
           "decic: cannot fix more than length (Y0) components");
  endif

  ## Set default values
  TolFun = 0;
  TolX   = eps;

  ## Check AbsTol and RelTol
  if (nargin == 7)
    if (! isempty (options.AbsTol))
      if (! isscalar (options.AbsTol))
        error ("Octave:invalid-input-arg",
               "decic: AbsTol must be a scalar value");
      else
        TolFun = options.AbsTol;
      endif
    endif

    if (! isempty (options.RelTol))
      if (! isscalar (options.RelTol))
        error ("Octave:invalid-input-arg",
               "decic: RelTol must be a scalar value");
      else
        TolX = options.RelTol;
      endif
    endif
  endif

  x0 = [y0(! fixed_y0); yp0(! fixed_yp0)];
  opt = optimset ("tolfun", TolFun, "tolx", TolX, "FinDiffType", "central");
  x = ...
    fminunc (@(x) objective (x, t0, y0, fixed_y0, yp0, fixed_yp0, nl, nu, fun),
             x0, opt);

  y0_new  = y0;
  yp0_new = yp0;

  y0_new(! fixed_y0)   = x(1:nl);
  yp0_new(! fixed_yp0) = x(nl+1:nl+nu);
  if (isargout (3))
    resnorm = fun (t0, y0_new, yp0_new);
  endif

endfunction

function res = objective (x, t0, y0, fixed_y0, yp0, fixed_yp0, nl, nu, fun)

  y = y0;
  y(! fixed_y0) = x(1:nl);
  yp = yp0;
  yp(! fixed_yp0) = x(nl+1:nl+nu);
  res = sqrt (sum (fun (t0, y, yp) .^ 2));

endfunction


%!function res = rob (t, y, yp)
%!  res =[-(yp(1) + 0.04*y(1) - 1e4*y(2)*y(3));
%!        -(yp(2) - 0.04*y(1) + 1e4*y(2)*y(3) + 3e7*y(2)^2);
%!        y(1) + y(2) + y(3) - 1];
%!endfunction

%!test  # Without options
%! ref1 = [1;0;0];
%! ref2 = [-4e-2; 4e-2; 0];
%! [ynew, ypnew] = decic (@rob,0,[1;0;0],[1;1;0],[23;110;0],[0;0;1]);
%! assert ([ynew(1:end), ypnew(1:end)], [ref1(1:end), ref2(1:end)], 1e-10);
%!test  # With options
%! ref1 = [1;0;0];
%! ref2 = [-4e-2; 4e-2; 0];
%! opt = odeset ("AbsTol", 1e-8, "RelTol", 1e-4);
%! [ynew, ypnew] = decic (@rob,0,[1;0;0],[1;1;0],[23;110;0],[0;0;1],opt);
%! assert ([ynew(1:end), ypnew(1:end)], [ref1(1:end), ref2(1:end)], 1e-5);

## Test input validation
%!error <Invalid call> decic ()
%!error <Invalid call> decic (1)
%!error <Invalid call> decic (1,2)
%!error <Invalid call> decic (1,2,3)
%!error <Invalid call> decic (1,2,3,4)
%!error <Invalid call> decic (1,2,3,4,5)
%!error <FUN must be a valid function handle>
%! decic (1, 0, [1; 0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 0; 0]);
%!error <T0 must be a numeric scalar>
%! decic (@rob, [1, 1], [1; 0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 0; 0]);
%!error <length of Y0, FIXED_Y0, YP0, and FIXED_YP0 must be equal>
%! decic (@rob, 0, [0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 0; 0]);
%!error <Y0, FIXED_Y0, YP0, and FIXED_YP0 must be numeric vectors>
%! decic (@rob, 0, [1; 0; 0], [1; 0],"", [0; 0; 0]);
%!error <Y0, FIXED_Y0, YP0, and FIXED_YP0 must be numeric vectors>
%! decic (@rob, 0, [1; 0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 0; "1"]);
%!error <FIXED_Y0 and FIXED_YP0 must be boolean vectors>
%! decic (@rob, 0, [1; 0; 0], [5; 5; 0], [-1e-4; 1; 0], [0; 0; 0]);
%!error <FIXED_Y0 and FIXED_YP0 must be boolean vectors>
%! decic (@rob, 0, [1; 0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 4; 0]);
%!error  <cannot fix more than length \(Y0\) components>
%! decic (@rob, 0, [1; 0; 0], [1; 1; 0], [-1e-4; 1; 0], [0; 1; 1]);