5164
|
1 /* |
|
2 |
|
3 Copyright (C) 2004 David Bateman |
|
4 Copyright (C) 1998-2004 Andy Adler |
|
5 |
|
6 Octave is free software; you can redistribute it and/or modify it |
|
7 under the terms of the GNU General Public License as published by the |
|
8 Free Software Foundation; either version 2, or (at your option) any |
|
9 later version. |
|
10 |
|
11 Octave is distributed in the hope that it will be useful, but WITHOUT |
|
12 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or |
|
13 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License |
|
14 for more details. |
|
15 |
|
16 You should have received a copy of the GNU General Public License |
|
17 along with this program; see the file COPYING. If not, write to the Free |
|
18 Software Foundation, 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. |
|
19 |
|
20 */ |
|
21 |
|
22 #ifdef HAVE_CONFIG_H |
|
23 #include <config.h> |
|
24 #endif |
|
25 |
|
26 #include <climits> |
|
27 |
|
28 #include <iostream> |
|
29 #include <vector> |
|
30 |
|
31 #include "ov-base.h" |
|
32 #include "ov-scalar.h" |
|
33 #include "gripes.h" |
|
34 |
|
35 #include "ls-hdf5.h" |
|
36 |
|
37 #include "ov-re-sparse.h" |
|
38 |
|
39 #include "ov-base-sparse.h" |
|
40 #include "ov-base-sparse.cc" |
|
41 |
|
42 #include "ov-bool-sparse.h" |
|
43 |
|
44 template class octave_base_sparse<SparseMatrix>; |
|
45 |
|
46 DEFINE_OCTAVE_ALLOCATOR (octave_sparse_matrix); |
|
47 |
|
48 DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA (octave_sparse_matrix, "sparse matrix", "sparse"); |
|
49 |
|
50 octave_value * |
|
51 octave_sparse_matrix::try_narrowing_conversion (void) |
|
52 { |
|
53 octave_value *retval = 0; |
|
54 |
|
55 // Don't use numel, since it can overflow for very large matrices |
|
56 // Note that for the second test, this means it becomes approximative |
|
57 // since it involves a cast to double to avoid issues of overflow |
|
58 if (matrix.rows () == 1 && matrix.cols () == 1) |
|
59 { |
|
60 // Const copy of the matrix, so the right version of () operator used |
|
61 const SparseMatrix tmp (matrix); |
|
62 |
|
63 retval = new octave_scalar (tmp (0)); |
|
64 } |
|
65 else if (matrix.cols () > 0 && matrix.rows () > 0 && |
|
66 double (matrix.byte_size ()) > double (matrix.rows ()) * |
|
67 double (matrix.cols ()) * sizeof (double)) |
|
68 retval = new octave_matrix (matrix.matrix_value ()); |
|
69 |
|
70 return retval; |
|
71 } |
|
72 |
|
73 bool |
|
74 octave_sparse_matrix::valid_as_scalar_index (void) const |
|
75 { |
|
76 // XXX FIXME XXX |
|
77 return false; |
|
78 } |
|
79 |
|
80 double |
|
81 octave_sparse_matrix::double_value (bool) const |
|
82 { |
|
83 double retval = lo_ieee_nan_value (); |
|
84 |
|
85 if (numel () > 0) |
|
86 { |
|
87 // XXX FIXME XXX -- is warn_fortran_indexing the right variable here? |
|
88 if (Vwarn_fortran_indexing) |
|
89 gripe_implicit_conversion ("real sparse matrix", "real scalar"); |
|
90 |
|
91 retval = matrix (0, 0); |
|
92 } |
|
93 else |
|
94 gripe_invalid_conversion ("real sparse matrix", "real scalar"); |
|
95 |
|
96 return retval; |
|
97 } |
|
98 |
|
99 Complex |
|
100 octave_sparse_matrix::complex_value (bool) const |
|
101 { |
|
102 double tmp = lo_ieee_nan_value (); |
|
103 |
|
104 Complex retval (tmp, tmp); |
|
105 |
|
106 // XXX FIXME XXX -- maybe this should be a function, valid_as_scalar() |
|
107 if (rows () > 0 && columns () > 0) |
|
108 { |
|
109 // XXX FIXME XXX -- is warn_fortran_indexing the right variable here? |
|
110 if (Vwarn_fortran_indexing) |
|
111 gripe_implicit_conversion ("real sparse matrix", "complex scalar"); |
|
112 |
|
113 retval = matrix (0, 0); |
|
114 } |
|
115 else |
|
116 gripe_invalid_conversion ("real sparse matrix", "complex scalar"); |
|
117 |
|
118 return retval; |
|
119 } |
|
120 |
|
121 Matrix |
|
122 octave_sparse_matrix::matrix_value (bool) const |
|
123 { |
|
124 return matrix.matrix_value (); |
|
125 } |
|
126 |
|
127 ComplexMatrix |
|
128 octave_sparse_matrix::complex_matrix_value (bool) const |
|
129 { |
|
130 return ComplexMatrix (matrix.matrix_value ()); |
|
131 } |
|
132 |
|
133 ComplexNDArray |
|
134 octave_sparse_matrix::complex_array_value (bool) const |
|
135 { |
|
136 return ComplexNDArray (ComplexMatrix (matrix.matrix_value ())); |
|
137 } |
|
138 |
|
139 NDArray |
|
140 octave_sparse_matrix::array_value (bool) const |
|
141 { |
|
142 return NDArray (matrix.matrix_value ()); |
|
143 } |
|
144 |
|
145 streamoff_array |
|
146 octave_sparse_matrix::streamoff_array_value (void) const |
|
147 { |
|
148 streamoff_array retval (dims ()); |
|
149 int nc = matrix.cols (); |
|
150 int nr = matrix.rows (); |
|
151 |
|
152 for (int j = 0; j < nc; j++) |
|
153 for (int i = matrix.cidx(i); i < matrix.cidx(i+1); i++) |
|
154 { |
|
155 double d = matrix.data(i); |
|
156 |
|
157 if (D_NINT (d) == d) |
|
158 { |
|
159 retval(matrix.ridx(i) + nr * j) = |
|
160 std::streamoff (static_cast<long> (d)); |
|
161 } |
|
162 else |
|
163 { |
|
164 error ("conversion to streamoff_array value failed"); |
|
165 break; |
|
166 } |
|
167 } |
|
168 |
|
169 return retval; |
|
170 } |
|
171 |
|
172 bool |
|
173 octave_sparse_matrix::save_binary (std::ostream& os, bool&save_as_floats) |
|
174 { |
|
175 dim_vector d = this->dims (); |
|
176 if (d.length() < 1) |
|
177 return false; |
|
178 |
|
179 // Ensure that additional memory is deallocated |
|
180 matrix.maybe_compress (); |
|
181 |
|
182 int nr = d(0); |
|
183 int nc = d(1); |
|
184 int nz = nnz (); |
|
185 |
|
186 FOUR_BYTE_INT itmp; |
|
187 // Use negative value for ndims to be consistent with other formats |
|
188 itmp= -2; |
|
189 os.write (X_CAST (char *, &itmp), 4); |
|
190 |
|
191 itmp= nr; |
|
192 os.write (X_CAST (char *, &itmp), 4); |
|
193 |
|
194 itmp= nc; |
|
195 os.write (X_CAST (char *, &itmp), 4); |
|
196 |
|
197 itmp= nz; |
|
198 os.write (X_CAST (char *, &itmp), 4); |
|
199 |
|
200 save_type st = LS_DOUBLE; |
|
201 if (save_as_floats) |
|
202 { |
|
203 if (matrix.too_large_for_float ()) |
|
204 { |
|
205 warning ("save: some values too large to save as floats --"); |
|
206 warning ("save: saving as doubles instead"); |
|
207 } |
|
208 else |
|
209 st = LS_FLOAT; |
|
210 } |
|
211 else if (matrix.nnz () > 8192) // XXX FIXME XXX -- make this configurable. |
|
212 { |
|
213 double max_val, min_val; |
|
214 if (matrix.all_integers (max_val, min_val)) |
|
215 st = get_save_type (max_val, min_val); |
|
216 } |
|
217 |
|
218 // add one to the printed indices to go from |
|
219 // zero-based to one-based arrays |
|
220 for (int i = 0; i < nc+1; i++) |
|
221 { |
|
222 OCTAVE_QUIT; |
|
223 itmp = matrix.cidx(i); |
|
224 os.write (X_CAST (char *, &itmp), 4); |
|
225 } |
|
226 |
|
227 for (int i = 0; i < nz; i++) |
|
228 { |
|
229 OCTAVE_QUIT; |
|
230 itmp = matrix.ridx(i); |
|
231 os.write (X_CAST (char *, &itmp), 4); |
|
232 } |
|
233 |
|
234 write_doubles (os, matrix.data(), st, nz); |
|
235 |
|
236 return true; |
|
237 } |
|
238 |
|
239 bool |
|
240 octave_sparse_matrix::load_binary (std::istream& is, bool swap, |
|
241 oct_mach_info::float_format fmt) |
|
242 { |
|
243 FOUR_BYTE_INT nz, nc, nr, tmp; |
|
244 if (! is.read (X_CAST (char *, &tmp), 4)) |
|
245 return false; |
|
246 |
|
247 if (swap) |
|
248 swap_bytes<4> (&tmp); |
|
249 |
|
250 if (tmp != -2) { |
|
251 error("load: only 2D sparse matrices are supported"); |
|
252 return false; |
|
253 } |
|
254 |
|
255 if (! is.read (X_CAST (char *, &nr), 4)) |
|
256 return false; |
|
257 if (! is.read (X_CAST (char *, &nc), 4)) |
|
258 return false; |
|
259 if (! is.read (X_CAST (char *, &nz), 4)) |
|
260 return false; |
|
261 |
|
262 if (swap) |
|
263 { |
|
264 swap_bytes<4> (&nr); |
|
265 swap_bytes<4> (&nc); |
|
266 swap_bytes<4> (&nz); |
|
267 } |
|
268 |
|
269 SparseMatrix m (nr, nc, nz); |
|
270 |
|
271 for (int i = 0; i < nc+1; i++) |
|
272 { |
|
273 OCTAVE_QUIT; |
|
274 if (! is.read (X_CAST (char *, &tmp), 4)) |
|
275 return false; |
|
276 if (swap) |
|
277 swap_bytes<4> (&tmp); |
|
278 m.xcidx(i) = tmp; |
|
279 } |
|
280 |
|
281 for (int i = 0; i < nz; i++) |
|
282 { |
|
283 OCTAVE_QUIT; |
|
284 if (! is.read (X_CAST (char *, &tmp), 4)) |
|
285 return false; |
|
286 if (swap) |
|
287 swap_bytes<4> (&tmp); |
|
288 m.xridx(i) = tmp; |
|
289 } |
|
290 |
|
291 if (! is.read (X_CAST (char *, &tmp), 1)) |
|
292 return false; |
|
293 |
|
294 read_doubles (is, m.xdata(), X_CAST (save_type, tmp), nz, swap, fmt); |
|
295 |
|
296 if (error_state || ! is) |
|
297 return false; |
|
298 matrix = m; |
|
299 |
|
300 return true; |
|
301 } |
|
302 |
|
303 #if defined (HAVE_HDF5) |
|
304 bool |
|
305 octave_sparse_matrix::save_hdf5 (hid_t loc_id, const char *name, |
|
306 bool save_as_floats) |
|
307 { |
|
308 dim_vector dv = dims (); |
|
309 int empty = save_hdf5_empty (loc_id, name, dv); |
|
310 if (empty) |
|
311 return (empty > 0); |
|
312 |
|
313 // Ensure that additional memory is deallocated |
|
314 matrix.maybe_compress (); |
|
315 |
|
316 hid_t group_hid = H5Gcreate (loc_id, name, 0); |
|
317 if (group_hid < 0) |
|
318 return false; |
|
319 |
|
320 hid_t space_hid = -1, data_hid = -1; |
|
321 bool retval = true; |
|
322 SparseMatrix m = sparse_matrix_value (); |
|
323 int tmp; |
|
324 hsize_t hdims[2]; |
|
325 |
|
326 space_hid = H5Screate_simple (0, hdims, (hsize_t*) 0); |
|
327 if (space_hid < 0) |
|
328 { |
|
329 H5Gclose (group_hid); |
|
330 return false; |
|
331 } |
|
332 |
|
333 data_hid = H5Dcreate (group_hid, "nr", H5T_NATIVE_INT, space_hid, |
|
334 H5P_DEFAULT); |
|
335 if (data_hid < 0) |
|
336 { |
|
337 H5Sclose (space_hid); |
|
338 H5Gclose (group_hid); |
|
339 return false; |
|
340 } |
|
341 |
|
342 tmp = m.rows (); |
|
343 retval = H5Dwrite (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, |
|
344 (void*) &tmp) >= 0; |
|
345 H5Dclose (data_hid); |
|
346 if (!retval) |
|
347 { |
|
348 H5Sclose (space_hid); |
|
349 H5Gclose (group_hid); |
|
350 return false; |
|
351 } |
|
352 |
|
353 data_hid = H5Dcreate (group_hid, "nc", H5T_NATIVE_INT, space_hid, |
|
354 H5P_DEFAULT); |
|
355 if (data_hid < 0) |
|
356 { |
|
357 H5Sclose (space_hid); |
|
358 H5Gclose (group_hid); |
|
359 return false; |
|
360 } |
|
361 |
|
362 tmp = m.cols (); |
|
363 retval = H5Dwrite (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, |
|
364 (void*) &tmp) >= 0; |
|
365 H5Dclose (data_hid); |
|
366 if (!retval) |
|
367 { |
|
368 H5Sclose (space_hid); |
|
369 H5Gclose (group_hid); |
|
370 return false; |
|
371 } |
|
372 |
|
373 data_hid = H5Dcreate (group_hid, "nz", H5T_NATIVE_INT, space_hid, |
|
374 H5P_DEFAULT); |
|
375 if (data_hid < 0) |
|
376 { |
|
377 H5Sclose (space_hid); |
|
378 H5Gclose (group_hid); |
|
379 return false; |
|
380 } |
|
381 |
|
382 tmp = m.nnz (); |
|
383 retval = H5Dwrite (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, |
|
384 (void*) &tmp) >= 0; |
|
385 H5Dclose (data_hid); |
|
386 if (!retval) |
|
387 { |
|
388 H5Sclose (space_hid); |
|
389 H5Gclose (group_hid); |
|
390 return false; |
|
391 } |
|
392 |
|
393 H5Sclose (space_hid); |
|
394 |
|
395 hdims[0] = m.cols() + 1; |
|
396 hdims[1] = 1; |
|
397 |
|
398 space_hid = H5Screate_simple (2, hdims, 0); |
|
399 |
|
400 if (space_hid < 0) |
|
401 { |
|
402 H5Gclose (group_hid); |
|
403 return false; |
|
404 } |
|
405 |
|
406 data_hid = H5Dcreate (group_hid, "cidx", H5T_NATIVE_INT, space_hid, |
|
407 H5P_DEFAULT); |
|
408 if (data_hid < 0) |
|
409 { |
|
410 H5Sclose (space_hid); |
|
411 H5Gclose (group_hid); |
|
412 return false; |
|
413 } |
|
414 |
|
415 int * itmp = m.xcidx (); |
|
416 retval = H5Dwrite (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, |
|
417 (void*) itmp) >= 0; |
|
418 H5Dclose (data_hid); |
|
419 if (!retval) |
|
420 { |
|
421 H5Sclose (space_hid); |
|
422 H5Gclose (group_hid); |
|
423 return false; |
|
424 } |
|
425 |
|
426 H5Sclose (space_hid); |
|
427 |
|
428 hdims[0] = m.nnz(); |
|
429 hdims[1] = 1; |
|
430 |
|
431 space_hid = H5Screate_simple (2, hdims, 0); |
|
432 |
|
433 if (space_hid < 0) |
|
434 { |
|
435 H5Gclose (group_hid); |
|
436 return false; |
|
437 } |
|
438 |
|
439 data_hid = H5Dcreate (group_hid, "ridx", H5T_NATIVE_INT, space_hid, |
|
440 H5P_DEFAULT); |
|
441 if (data_hid < 0) |
|
442 { |
|
443 H5Sclose (space_hid); |
|
444 H5Gclose (group_hid); |
|
445 return false; |
|
446 } |
|
447 |
|
448 itmp = m.xridx (); |
|
449 retval = H5Dwrite (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, |
|
450 (void*) itmp) >= 0; |
|
451 H5Dclose (data_hid); |
|
452 if (!retval) |
|
453 { |
|
454 H5Sclose (space_hid); |
|
455 H5Gclose (group_hid); |
|
456 return false; |
|
457 } |
|
458 |
|
459 hid_t save_type_hid = H5T_NATIVE_DOUBLE; |
|
460 |
|
461 if (save_as_floats) |
|
462 { |
|
463 if (m.too_large_for_float ()) |
|
464 { |
|
465 warning ("save: some values too large to save as floats --"); |
|
466 warning ("save: saving as doubles instead"); |
|
467 } |
|
468 else |
|
469 save_type_hid = H5T_NATIVE_FLOAT; |
|
470 } |
|
471 #if HAVE_HDF5_INT2FLOAT_CONVERSIONS |
|
472 // hdf5 currently doesn't support float/integer conversions |
|
473 else |
|
474 { |
|
475 double max_val, min_val; |
|
476 |
|
477 if (m.all_integers (max_val, min_val)) |
|
478 save_type_hid |
|
479 = save_type_to_hdf5 (get_save_type (max_val, min_val)); |
|
480 } |
|
481 #endif /* HAVE_HDF5_INT2FLOAT_CONVERSIONS */ |
|
482 |
|
483 data_hid = H5Dcreate (group_hid, "data", save_type_hid, space_hid, |
|
484 H5P_DEFAULT); |
|
485 if (data_hid < 0) |
|
486 { |
|
487 H5Sclose (space_hid); |
|
488 H5Gclose (group_hid); |
|
489 return false; |
|
490 } |
|
491 |
|
492 double * dtmp = m.xdata (); |
|
493 retval = H5Dwrite (data_hid, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, |
|
494 H5P_DEFAULT, (void*) dtmp) >= 0; |
|
495 H5Dclose (data_hid); |
|
496 H5Sclose (space_hid); |
|
497 H5Gclose (group_hid); |
|
498 |
|
499 return retval; |
|
500 } |
|
501 |
|
502 bool |
|
503 octave_sparse_matrix::load_hdf5 (hid_t loc_id, const char *name, |
|
504 bool /* have_h5giterate_bug */) |
|
505 { |
|
506 int nr, nc, nz; |
|
507 hid_t group_hid, data_hid, space_hid; |
|
508 hsize_t rank; |
|
509 |
|
510 dim_vector dv; |
|
511 int empty = load_hdf5_empty (loc_id, name, dv); |
|
512 if (empty > 0) |
|
513 matrix.resize(dv); |
|
514 if (empty) |
|
515 return (empty > 0); |
|
516 |
|
517 group_hid = H5Gopen (loc_id, name); |
|
518 if (group_hid < 0 ) return false; |
|
519 |
|
520 data_hid = H5Dopen (group_hid, "nr"); |
|
521 space_hid = H5Dget_space (data_hid); |
|
522 rank = H5Sget_simple_extent_ndims (space_hid); |
|
523 |
|
524 if (rank != 0) |
|
525 { |
|
526 H5Dclose (data_hid); |
|
527 H5Gclose (group_hid); |
|
528 return false; |
|
529 } |
|
530 |
|
531 if (H5Dread (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, |
|
532 H5P_DEFAULT, (void *) &nr) < 0) |
|
533 { |
|
534 H5Dclose (data_hid); |
|
535 H5Gclose (group_hid); |
|
536 return false; |
|
537 } |
|
538 |
|
539 H5Dclose (data_hid); |
|
540 |
|
541 data_hid = H5Dopen (group_hid, "nc"); |
|
542 space_hid = H5Dget_space (data_hid); |
|
543 rank = H5Sget_simple_extent_ndims (space_hid); |
|
544 |
|
545 if (rank != 0) |
|
546 { |
|
547 H5Dclose (data_hid); |
|
548 H5Gclose (group_hid); |
|
549 return false; |
|
550 } |
|
551 |
|
552 if (H5Dread (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, |
|
553 H5P_DEFAULT, (void *) &nc) < 0) |
|
554 { |
|
555 H5Dclose (data_hid); |
|
556 H5Gclose (group_hid); |
|
557 return false; |
|
558 } |
|
559 |
|
560 H5Dclose (data_hid); |
|
561 |
|
562 data_hid = H5Dopen (group_hid, "nz"); |
|
563 space_hid = H5Dget_space (data_hid); |
|
564 rank = H5Sget_simple_extent_ndims (space_hid); |
|
565 |
|
566 if (rank != 0) |
|
567 { |
|
568 H5Dclose (data_hid); |
|
569 H5Gclose (group_hid); |
|
570 return false; |
|
571 } |
|
572 |
|
573 if (H5Dread (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, |
|
574 H5P_DEFAULT, (void *) &nz) < 0) |
|
575 { |
|
576 H5Dclose (data_hid); |
|
577 H5Gclose (group_hid); |
|
578 return false; |
|
579 } |
|
580 |
|
581 H5Dclose (data_hid); |
|
582 |
|
583 SparseMatrix m (nr, nc, nz); |
|
584 |
|
585 data_hid = H5Dopen (group_hid, "cidx"); |
|
586 space_hid = H5Dget_space (data_hid); |
|
587 rank = H5Sget_simple_extent_ndims (space_hid); |
|
588 |
|
589 if (rank != 2) |
|
590 { |
|
591 H5Sclose (space_hid); |
|
592 H5Dclose (data_hid); |
|
593 H5Gclose (group_hid); |
|
594 return false; |
|
595 } |
|
596 |
|
597 OCTAVE_LOCAL_BUFFER (hsize_t, hdims, rank); |
|
598 OCTAVE_LOCAL_BUFFER (hsize_t, maxdims, rank); |
|
599 |
|
600 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); |
|
601 |
|
602 if (hdims[0] != nc + 1 || hdims[1] != 1) |
|
603 { |
|
604 H5Sclose (space_hid); |
|
605 H5Dclose (data_hid); |
|
606 H5Gclose (group_hid); |
|
607 return false; |
|
608 } |
|
609 |
|
610 int *itmp = m.xcidx (); |
|
611 if (H5Dread (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, |
|
612 H5P_DEFAULT, (void *) itmp) < 0) |
|
613 { |
|
614 H5Sclose (space_hid); |
|
615 H5Dclose (data_hid); |
|
616 H5Gclose (group_hid); |
|
617 return false; |
|
618 } |
|
619 |
|
620 H5Sclose (space_hid); |
|
621 H5Dclose (data_hid); |
|
622 |
|
623 data_hid = H5Dopen (group_hid, "ridx"); |
|
624 space_hid = H5Dget_space (data_hid); |
|
625 rank = H5Sget_simple_extent_ndims (space_hid); |
|
626 |
|
627 if (rank != 2) |
|
628 { |
|
629 H5Sclose (space_hid); |
|
630 H5Dclose (data_hid); |
|
631 H5Gclose (group_hid); |
|
632 return false; |
|
633 } |
|
634 |
|
635 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); |
|
636 |
|
637 if (hdims[0] != nz || hdims[1] != 1) |
|
638 { |
|
639 H5Sclose (space_hid); |
|
640 H5Dclose (data_hid); |
|
641 H5Gclose (group_hid); |
|
642 return false; |
|
643 } |
|
644 |
|
645 itmp = m.xridx (); |
|
646 if (H5Dread (data_hid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, |
|
647 H5P_DEFAULT, (void *) itmp) < 0) |
|
648 { |
|
649 H5Sclose (space_hid); |
|
650 H5Dclose (data_hid); |
|
651 H5Gclose (group_hid); |
|
652 return false; |
|
653 } |
|
654 |
|
655 H5Sclose (space_hid); |
|
656 H5Dclose (data_hid); |
|
657 |
|
658 data_hid = H5Dopen (group_hid, "data"); |
|
659 space_hid = H5Dget_space (data_hid); |
|
660 rank = H5Sget_simple_extent_ndims (space_hid); |
|
661 |
|
662 if (rank != 2) |
|
663 { |
|
664 H5Sclose (space_hid); |
|
665 H5Dclose (data_hid); |
|
666 H5Gclose (group_hid); |
|
667 return false; |
|
668 } |
|
669 |
|
670 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); |
|
671 |
|
672 if (hdims[0] != nz || hdims[1] != 1) |
|
673 { |
|
674 H5Sclose (space_hid); |
|
675 H5Dclose (data_hid); |
|
676 H5Gclose (group_hid); |
|
677 return false; |
|
678 } |
|
679 |
|
680 double *dtmp = m.xdata (); |
|
681 if (H5Dread (data_hid, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, |
|
682 H5P_DEFAULT, (void *) dtmp) < 0) |
|
683 { |
|
684 H5Sclose (space_hid); |
|
685 H5Dclose (data_hid); |
|
686 H5Gclose (group_hid); |
|
687 return false; |
|
688 } |
|
689 |
|
690 H5Sclose (space_hid); |
|
691 H5Dclose (data_hid); |
|
692 H5Gclose (group_hid); |
|
693 |
|
694 matrix = m; |
|
695 |
|
696 return true; |
|
697 } |
|
698 #endif |
|
699 |
|
700 /* |
|
701 ;;; Local Variables: *** |
|
702 ;;; mode: C++ *** |
|
703 ;;; End: *** |
|
704 */ |