view scripts/statistics/tests/mcnemar_test.m @ 19074:0850b5212619

doc: Add @nospell macro around proper names in documentation. * aspell-octave.en.pws: Remove proper names from Octave's custom dictionary. * doc/interpreter/audio.txi, doc/interpreter/diagperm.txi, doc/interpreter/diffeq.txi, doc/interpreter/emacs.txi, doc/interpreter/func.txi, doc/interpreter/geometry.txi, doc/interpreter/intro.txi, doc/interpreter/linalg.txi, doc/interpreter/numbers.txi, doc/interpreter/preface.txi, doc/interpreter/quad.txi, doc/interpreter/sparse.txi, libinterp/corefcn/colloc.cc, libinterp/corefcn/ellipj.cc, libinterp/corefcn/gammainc.cc, libinterp/corefcn/hess.cc, libinterp/corefcn/quadcc.cc, libinterp/corefcn/rand.cc, libinterp/corefcn/sqrtm.cc, libinterp/dldfcn/ccolamd.cc, libinterp/dldfcn/colamd.cc, libinterp/dldfcn/dmperm.cc, libinterp/dldfcn/symrcm.cc, scripts/general/quadgk.m, scripts/general/quadl.m, scripts/linear-algebra/commutation_matrix.m, scripts/linear-algebra/condest.m, scripts/linear-algebra/duplication_matrix.m, scripts/linear-algebra/expm.m, scripts/linear-algebra/housh.m, scripts/linear-algebra/krylov.m, scripts/linear-algebra/onenormest.m, scripts/linear-algebra/qzhess.m, scripts/optimization/fminsearch.m, scripts/optimization/glpk.m, scripts/signal/arch_fit.m, scripts/signal/bartlett.m, scripts/signal/blackman.m, scripts/signal/diffpara.m, scripts/signal/durbinlevinson.m, scripts/signal/hamming.m, scripts/signal/hanning.m, scripts/sparse/eigs.m, scripts/sparse/pcg.m, scripts/sparse/pcr.m, scripts/specfun/ellipke.m, scripts/special-matrix/gallery.m, scripts/special-matrix/invhilb.m, scripts/statistics/base/quantile.m, scripts/statistics/tests/kruskal_wallis_test.m, scripts/statistics/tests/manova.m, scripts/statistics/tests/mcnemar_test.m: Add @nospell macro around proper names in documentation.
author Rik <rik@octave.org>
date Thu, 21 Aug 2014 15:57:18 -0700
parents d63878346099
children 4197fc428c7d
line wrap: on
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## Copyright (C) 1996-2013 Kurt Hornik
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn {Function File} {[@var{pval}, @var{chisq}, @var{df}] =} mcnemar_test (@var{x})
## For a square contingency table @var{x} of data cross-classified on
## the row and column variables, @nospell{McNemar's} test can be used for
## testing the null hypothesis of symmetry of the classification probabilities.
##
## Under the null, @var{chisq} is approximately distributed as chisquare
## with @var{df} degrees of freedom.
##
## The p-value (1 minus the CDF of this distribution at @var{chisq}) is
## returned in @var{pval}.
##
## If no output argument is given, the p-value of the test is displayed.
## @end deftypefn

## Author: KH <Kurt.Hornik@wu-wien.ac.at>
## Description: McNemar's test for symmetry

function [pval, chisq, df] = mcnemar_test (x)

  if (nargin != 1)
    print_usage ();
  endif

  if (! (min (size (x)) > 1) && issquare (x))
    error ("mcnemar_test: X must be a square matrix of size > 1");
  elseif (! (all (all (x >= 0)) && all (all (x == fix (x)))))
    error ("mcnemar_test: all entries of X must be non-negative integers");
  endif

  r = rows (x);
  df = r * (r - 1) / 2;
  if (r == 2)
    num = max (abs (x - x') - 1, 0) .^ 2;
  else
    num = abs (x - x') .^ 2;
  endif

  chisq = sum (sum (triu (num ./ (x + x'), 1)));
  pval = 1 - chi2cdf (chisq, df);

  if (nargout == 0)
    printf ("  pval: %g\n", pval);
  endif

endfunction