view scripts/statistics/tests/t_test_regression.m @ 20216:aa36fb998a4d stable

maint: Remove unnecessary whitespace at end of lines. * libgui/Makefile.am, libgui/graphics/Canvas.cc, libgui/graphics/EditControl.cc, libgui/graphics/Figure.cc, libgui/graphics/MouseModeActionGroup.cc, libgui/graphics/annotation-dialog.cc, libgui/graphics/annotation-dialog.h, libgui/graphics/gl-select.cc, libgui/graphics/module.mk, libgui/kb-layouts/default.keytab, libgui/kb-layouts/linux.keytab, libgui/kb-layouts/vt420pc.keytab, libgui/src/m-editor/find-dialog.cc, libgui/src/main-window.cc, libgui/src/octave-qt-link.cc, libgui/src/octave-qt-link.h, libgui/src/shortcut-manager.h, libinterp/corefcn/error.cc, libinterp/corefcn/find.cc, libinterp/corefcn/gl2ps-renderer.cc, libinterp/corefcn/graphics.cc, libinterp/corefcn/graphics.in.h, libinterp/corefcn/octave-link.cc, libinterp/corefcn/quadcc.cc, libinterp/corefcn/strfns.cc, libinterp/corefcn/syscalls.cc, libinterp/corefcn/sysdep.cc, libinterp/corefcn/urlwrite.cc, libinterp/corefcn/utils.cc, libinterp/corefcn/variables.cc, libinterp/dldfcn/__init_fltk__.cc, libinterp/dldfcn/ccolamd.cc, libinterp/dldfcn/colamd.cc, libinterp/octave-value/ov-bool-sparse.cc, libinterp/octave-value/ov-classdef.cc, libinterp/octave-value/ov-re-sparse.cc, libinterp/octave-value/ov-struct.cc, libinterp/parse-tree/pt-arg-list.cc, scripts/audio/@audiorecorder/play.m, scripts/audio/wavwrite.m, scripts/general/cart2sph.m, scripts/geometry/inpolygon.m, scripts/gui/listdlg.m, scripts/gui/msgbox.m, scripts/gui/private/message_dialog.m, scripts/help/get_first_help_sentence.m, scripts/help/lookfor.m, scripts/image/imshow.m, scripts/io/strread.m, scripts/java/javamem.m, scripts/miscellaneous/dir.m, scripts/miscellaneous/edit.m, scripts/miscellaneous/genvarname.m, scripts/miscellaneous/gzip.m, scripts/miscellaneous/private/__w2mpth__.m, scripts/plot/appearance/annotation.m, scripts/plot/draw/colorbar.m, scripts/plot/draw/quiver3.m, scripts/plot/util/hold.m, scripts/plot/util/print.m, scripts/polynomial/mkpp.m, scripts/polynomial/polyder.m, scripts/polynomial/spline.m, scripts/polynomial/unmkpp.m, scripts/signal/arma_rnd.m, scripts/sparse/gplot.m, scripts/statistics/tests/t_test.m, scripts/statistics/tests/t_test_regression.m, scripts/strings/mat2str.m, scripts/strings/strsplit.m, scripts/strings/strtrunc.m, scripts/strings/untabify.m, scripts/testfun/assert.m: maint: Remove unnecessary whitespace at end of lines.
author Rik <rik@octave.org>
date Tue, 12 May 2015 09:22:01 -0700
parents d9341b422488
children
line wrap: on
line source

## Copyright (C) 1995-2015 Kurt Hornik
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn {Function File} {[@var{pval}, @var{t}, @var{df}] =} t_test_regression (@var{y}, @var{x}, @var{rr}, @var{r}, @var{alt})
## Perform a t test for the null hypothesis
## @nospell{@code{@var{rr} * @var{b} = @var{r}}} in a classical normal
## regression model @code{@var{y} = @var{x} * @var{b} + @var{e}}.
##
## Under the null, the test statistic @var{t} follows a @var{t} distribution
## with @var{df} degrees of freedom.
##
## If @var{r} is omitted, a value of 0 is assumed.
##
## With the optional argument string @var{alt}, the alternative of interest
## can be selected.  If @var{alt} is @qcode{"!="} or @qcode{"<>"}, the null
## is tested against the two-sided alternative @nospell{@code{@var{rr} *
## @var{b} != @var{r}}}.  If @var{alt} is @qcode{">"}, the one-sided
## alternative @nospell{@code{@var{rr} * @var{b} > @var{r}}} is used.
## Similarly for @var{"<"}, the one-sided alternative @nospell{@code{@var{rr}
## * @var{b} < @var{r}}} is used.  The default is the two-sided case.
##
## The p-value of the test is returned in @var{pval}.
##
## If no output argument is given, the p-value of the test is displayed.
## @end deftypefn

## Author: KH <Kurt.Hornik@wu-wien.ac.at>
## Description: Test one linear hypothesis in linear regression model

function [pval, t, df] = t_test_regression (y, x, rr, r, alt)

  if (nargin == 3)
    r   = 0;
    alt = "!=";
  elseif (nargin == 4)
    if (ischar (r))
      alt = r;
      r   = 0;
    else
      alt = "!=";
    endif
  elseif (! (nargin == 5))
    print_usage ();
  endif

  if (! isscalar (r))
    error ("t_test_regression: R must be a scalar");
  elseif (! ischar (alt))
    error ("t_test_regression: ALT must be a string");
  endif

  [T, k] = size (x);
  if (! (isvector (y) && (length (y) == T)))
    error ("t_test_regression: Y must be a vector of length rows (X)");
  endif
  s = size (rr);
  if (! ((max (s) == k) && (min (s) == 1)))
    error ("t_test_regression: RR must be a vector of length columns (X)");
  endif

  rr     = reshape (rr, 1, k);
  y      = reshape (y, T, 1);
  [b, v] = ols (y, x);
  df     = T - k;
  t      = (rr * b - r) / sqrt (v * rr * inv (x' * x) * rr');
  cdf    = tcdf (t, df);

  if (strcmp (alt, "!=") || strcmp (alt, "<>"))
    pval = 2 * min (cdf, 1 - cdf);
  elseif (strcmp (alt, ">"))
    pval = 1 - cdf;
  elseif (strcmp (alt, "<"))
    pval = cdf;
  else
    error ("t_test_regression: the value '%s' for alt is not possible", alt);
  endif

  if (nargout == 0)
    printf ("pval: %g\n", pval);
  endif

endfunction