view doc/interpreter/sparseimages.m @ 20370:b439ccc9a162

doc: Improve building of images for the Manual. Switch to using 'qt' as the default toolkit. Stop producing onscreen flicker when building images. Correctly build extended.pdf with new non-recursive build system. * plot.txi: Change sample code for generation of image 15.7 to match the code in plotimages.m * geometryimages.m, sparseimages.m, interpimages.m, splineimages.m: Call new function set_graphics_toolkit which makes sure there is at least something available to do plotting with. Change hide_output() function to call figure() directly with "visible", "off" properties passed to it so there is never a moment when the figure is visible (stops flicker). * plotimages.m: Change directory to working directory where documentation files are kept before executing print with "-pdflatexstandalone". Call pdflatex from within the working directory since that is what it expects. Clean up after pdflatex by deleting auxiliary files. Capture status and output of system command which invokes pdflatex so that it does not spew in to the logs. Change text() command to use '\displaystyle' which looks nicer. Add set_graphics_toolkit function and modify hide_output function as above.
author Rik <rik@octave.org>
date Sun, 12 Jul 2015 15:00:26 -0700
parents d8992a16643c
children
line wrap: on
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## Copyright (C) 2006-2015 David Bateman
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

function sparseimages (d, nm, typ)
  set_graphics_toolkit ();
  set_print_size ();
  if (strcmp (typ, "png"))
    set (0, "defaulttextfontname", "*");
  endif

  if (__have_feature__ ("COLAMD")
      && __have_feature__ ("CHOLMOD")
      && __have_feature__ ("UMFPACK"))
    if (strcmp (typ,"txt"))
      txtimages (d, nm, 15, typ);
    else
      if (strcmp (nm, "gplot"))
        gplotimages (d, "gplot", typ);
      elseif (strcmp (nm, "grid"))
        femimages (d, "grid", typ);
      else
        otherimages (d, nm, 200, typ);
      endif
    endif
  else ## There is no sparse matrix implementation available because
       ## of missing libraries, plot sombreros instead
    sombreroimage (d, nm, typ);
  endif
endfunction

function gplotimages (d, nm, typ)
  hide_output ();
  outfile = fullfile (d, strcat (nm, ".", typ));
  if (strcmp (typ, "eps"))
    d_typ = "-depsc2";
  else
    d_typ = ["-d" typ];
  endif

  A = sparse ([2,6,1,3,2,4,3,5,4,6,1,5],
              [1,1,2,2,3,3,4,4,5,5,6,6], 1, 6, 6);
  xy = [0,4,8,6,4,2;5,0,5,7,5,7]';
  gplot (A, xy);
  print (outfile, d_typ);
  hide_output ();
endfunction

function txtimages (d, nm, n, typ)
  outfile = fullfile (d, strcat (nm, ".", typ));
  a = 10*speye (n) + sparse (1:n,ceil([1:n]/2),1,n,n) + ...
      sparse (ceil ([1:n]/2),1:n,1,n,n);
  if (strcmp (nm, "gplot") || strcmp (nm, "grid"))
    fid = fopen (fullfile (d, strcat (nm, ".txt")), "wt");
    fputs (fid, "\n");
    fputs (fid, "+---------------------------------+\n");
    fputs (fid, "| Image unavailable in text mode. |\n");
    fputs (fid, "+---------------------------------+\n");
    fclose (fid);
  elseif (strcmp (nm, "spmatrix"))
    printsparse (a, outfile);
  else
    if (__have_feature__ ("COLAMD") && __have_feature__ ("CHOLMOD"))
      if (strcmp (nm, "spchol"))
        r1 = chol (a);
        printsparse (r1, outfile);
      elseif (strcmp (nm, "spcholperm"))
        [r2,p2,q2] = chol (a);
        printsparse (r2, outfile);
      endif
      ## printf("Text NNZ: Matrix %d, Chol %d, PermChol %d\n",nnz(a),nnz(r1),nnz(r2));
    endif
  endif
endfunction

function otherimages (d, nm, n, typ)
  hide_output ();
  outfile = fullfile (d, strcat (nm, ".", typ));
  if (strcmp (typ, "eps"))
    d_typ = "-depsc2";
  else
    d_typ = ["-d" typ];
  endif

  a = 10*speye (n) + sparse (1:n,ceil ([1:n]/2),1,n,n) + ...
      sparse (ceil ([1:n]/2),1:n,1,n,n);
  if (strcmp (nm, "spmatrix"))
    spy (a);
    axis ("ij");
    print (outfile, d_typ);
    hide_output ();
  else
    if (__have_feature__ ("COLAMD") && __have_feature__ ("CHOLMOD"))
      if (strcmp (nm, "spchol"))
        r1 = chol (a);
        spy (r1);
        axis ("ij");
        print (outfile, d_typ);
        hide_output ();
      elseif (strcmp (nm, "spcholperm"))
        [r2,p2,q2] = chol (a);
        spy (r2);
        axis ("ij");
        print (outfile, d_typ);
        hide_output ();
      endif
      ## printf("Image NNZ: Matrix %d, Chol %d, PermChol %d\n",nnz(a),nnz(r1),nnz(r2));
    endif
  endif
endfunction

function printsparse (a, nm)
  fid = fopen (nm,"wt");
  fputs (fid, "\n");
  for i = 1:rows (a)
    if (rem (i,5) == 0)
      fprintf (fid,"         %2d - ", i);
    else
      fprintf (fid,"            | ");
    endif
    for j = 1:columns (a)
      if (a(i,j) == 0)
        fprintf (fid,"  ");
      else
        fprintf (fid," *");
      endif
    endfor
    fprintf (fid,"\n");
  endfor
  fprintf (fid,"            |-");
  for j = 1:columns (a)
    if (rem (j,5) == 0)
      fprintf (fid,"-|");
    else
      fprintf (fid,"--");
    endif
  endfor
  fprintf (fid,"\n");
  fprintf (fid,"              ");
  for j = 1:columns (a)
    if (rem (j,5) == 0)
      fprintf (fid,"%2d",j);
    else
      fprintf (fid,"  ");
    endif
  endfor
  fclose (fid);
endfunction

function femimages (d, nm, typ)
  hide_output ();
  outfile = fullfile (d, strcat (nm, ".", typ));
  if (strcmp (typ, "eps"))
    d_typ = "-depsc2";
  else
    d_typ = ["-d" typ];
  endif

  if (__have_feature__ ("COLAMD")
      && __have_feature__ ("CHOLMOD")
      && __have_feature__ ("UMFPACK"))
    ## build a rectangle
    node_y = [1;1.2;1.5;1.8;2] * ones (1,11);
    node_x = ones (5,1) * [1,1.05,1.1,1.2,1.3,1.5,1.7,1.8,1.9,1.95,2];
    nodes = [node_x(:), node_y(:)];

    [h,w] = size (node_x);
    elems = [];
    for idx = 1 : w-1
      widx = (idx-1)*h;
      elems = [elems; widx+[(1:h-1);(2:h);h+(1:h-1)]'];
      elems = [elems; widx+[(2:h);h+(2:h);h+(1:h-1)]'];
    endfor

    E = size (elems,1);  # No. of elements
    N = size (nodes,1);  # No. of elements
    D = size (elems,2);  # dimensions+1

    ## Plot FEM Geometry
    elemx = elems(:,[1,2,3,1])';
    xelems = reshape (nodes(elemx, 1), 4, E);
    yelems = reshape (nodes(elemx, 2), 4, E);

    ## Set element conductivity
    conductivity = [1*ones(1,16), 2*ones(1,48), 1*ones(1,16)];

    ## Dirichlet boundary conditions
    D_nodes = [1:5, 51:55];
    D_value = [10*ones(1,5), 20*ones(1,5)];

    ## Neumann boundary conditions
    ## Note that N_value must be normalized by the boundary
    ##   length and element conductivity
    N_nodes = [];
    N_value = [];

    ## Calculate connectivity matrix
    C = sparse ((1:D*E), reshape (elems',D*E,1),1, D*E, N);

    ## Calculate stiffness matrix
    Siidx = floor ([0:D*E-1]'/D)*D*ones(1,D) + ones(D*E,1)*(1:D);
    Sjidx = [1:D*E]'*ones (1,D);
    Sdata = zeros (D*E,D);
    dfact = prod (2:(D-1));
    for j = 1:E
      a = inv ([ ones(D,1), nodes( elems(j,:), : ) ]);
      const = conductivity(j)*2/dfact/abs (det (a));
      Sdata(D*(j-1)+(1:D),:) = const * a(2:D,:)'*a(2:D,:);
    endfor

    ## Element-wise system matrix
    SE = sparse (Siidx,Sjidx,Sdata);
    ## Global system matrix
    S = C'* SE *C;

    ## Set Dirichlet boundary
    V = zeros (N,1);
    V(D_nodes) = D_value;
    idx = 1:N;
    idx(D_nodes) = [];

    ## Set Neumann boundary
    Q = zeros (N,1);
    Q(N_nodes) = N_value; # FIXME

    V(idx) = S(idx,idx) \ ( Q(idx) - S(idx,D_nodes)*V(D_nodes) );

    velems = reshape (V(elemx), 4, E);

    plot3 (xelems, yelems, velems);
    view (80, 10);
    print (outfile, d_typ);
    hide_output ();
  endif
endfunction

## There is no sparse matrix implementation available because of missing
## libraries, plot sombreros instead. Also plot a nice title that we are
## sorry about that.
function sombreroimage (d, nm, typ)
  if (strcmp (typ, "txt"))
    fid = fopen (fullfile (d, [nm ".txt"]), "wt");
    fputs (fid, "\n");
    fputs (fid, "+---------------------------------------+\n");
    fputs (fid, "| Image unavailable because of a        |\n");
    fputs (fid, "| missing sparse matrix implementation. |\n");
    fputs (fid, "+---------------------------------------+\n");
    fclose (fid);
    return;
  else
    hide_output ();
    if (strcmp (typ, "eps"))
      d_typ = "-depsc2";
    else
      d_typ = ["-d" typ];
    endif

    [x, y, z] = sombrero ();
    unwind_protect
      mesh (x, y, z);
      title ("Sorry, graphics are unavailable because Octave was\ncompiled without a sparse matrix implementation.");
    unwind_protect_cleanup
      print (outfile, d_typ);
      hide_output ();
    end_unwind_protect
  endif
endfunction

## This function no longer sets the graphics toolkit; That is now done
## automatically by C++ code which will ordinarily choose 'qt', but might
## choose gnuplot on older systems.  Only a complete lack of plotting is a
## problem.
function set_graphics_toolkit ()
  if (isempty (available_graphics_toolkits ()))
    error ("no graphics toolkit available for plotting");
  endif
endfunction

function set_print_size ()
  image_size = [5.0, 3.5]; # in inches, 16:9 format
  border = 0;              # For postscript use 50/72
  set (0, "defaultfigurepapertype", "<custom>");
  set (0, "defaultfigurepaperorientation", "landscape");
  set (0, "defaultfigurepapersize", image_size + 2*border);
  set (0, "defaultfigurepaperposition", [border, border, image_size]);
endfunction

## Use this function before plotting commands and after every call to print
## since print() resets output to stdout (unfortunately, gnuplot can't pop
## output as it can the terminal type).
function hide_output ()
  hf = figure (1, "visible", "off");
endfunction