view scripts/statistics/base/ols.m @ 14363:f3d52523cde1

Use Octave coding conventions in all m-file %!test blocks * wavread.m, acosd.m, acot.m, acotd.m, acoth.m, acsc.m, acscd.m, acsch.m, asec.m, asecd.m, asech.m, asind.m, atand.m, cosd.m, cot.m, cotd.m, coth.m, csc.m, cscd.m, csch.m, sec.m, secd.m, sech.m, sind.m, tand.m, accumarray.m, accumdim.m, bitcmp.m, bitget.m, bitset.m, blkdiag.m, cart2pol.m, cart2sph.m, celldisp.m, chop.m, circshift.m, colon.m, common_size.m, cplxpair.m, cumtrapz.m, curl.m, dblquad.m, deal.m, divergence.m, flipdim.m, fliplr.m, flipud.m, genvarname.m, gradient.m, idivide.m, int2str.m, interp1.m, interp1q.m, interp2.m, interp3.m, interpft.m, interpn.m, isa.m, isdir.m, isequal.m, isequalwithequalnans.m, issquare.m, logspace.m, nargchk.m, narginchk.m, nargoutchk.m, nextpow2.m, nthargout.m, num2str.m, pol2cart.m, polyarea.m, postpad.m, prepad.m, profile.m, profshow.m, quadgk.m, quadv.m, randi.m, rat.m, repmat.m, rot90.m, rotdim.m, shift.m, shiftdim.m, sph2cart.m, structfun.m, trapz.m, triplequad.m, convhull.m, dsearch.m, dsearchn.m, griddata3.m, griddatan.m, rectint.m, tsearchn.m, __makeinfo__.m, doc.m, get_first_help_sentence.m, help.m, type.m, unimplemented.m, which.m, imread.m, imwrite.m, dlmwrite.m, fileread.m, is_valid_file_id.m, strread.m, textread.m, textscan.m, commutation_matrix.m, cond.m, condest.m, cross.m, duplication_matrix.m, expm.m, housh.m, isdefinite.m, ishermitian.m, issymmetric.m, logm.m, normest.m, null.m, onenormest.m, orth.m, planerot.m, qzhess.m, rank.m, rref.m, trace.m, vech.m, ans.m, bincoeff.m, bug_report.m, bzip2.m, comma.m, compare_versions.m, computer.m, edit.m, fileparts.m, fullfile.m, getfield.m, gzip.m, info.m, inputname.m, isappdata.m, isdeployed.m, ismac.m, ispc.m, isunix.m, list_primes.m, ls.m, mexext.m, namelengthmax.m, news.m, orderfields.m, paren.m, recycle.m, rmappdata.m, semicolon.m, setappdata.m, setfield.m, substruct.m, symvar.m, ver.m, version.m, warning_ids.m, xor.m, fminbnd.m, fsolve.m, fzero.m, lsqnonneg.m, optimset.m, pqpnonneg.m, sqp.m, matlabroot.m, __gnuplot_drawnow__.m, __plt_get_axis_arg__.m, ancestor.m, cla.m, clf.m, close.m, colorbar.m, colstyle.m, comet3.m, contourc.m, figure.m, gca.m, gcbf.m, gcbo.m, gcf.m, ginput.m, graphics_toolkit.m, gtext.m, hggroup.m, hist.m, hold.m, isfigure.m, ishghandle.m, ishold.m, isocolors.m, isonormals.m, isosurface.m, isprop.m, legend.m, line.m, loglog.m, loglogerr.m, meshgrid.m, ndgrid.m, newplot.m, orient.m, patch.m, plot3.m, plotyy.m, __print_parse_opts__.m, quiver3.m, refreshdata.m, ribbon.m, semilogx.m, semilogxerr.m, semilogy.m, stem.m, stem3.m, subplot.m, title.m, uigetfile.m, view.m, whitebg.m, compan.m, conv.m, deconv.m, mkpp.m, mpoles.m, pchip.m, poly.m, polyaffine.m, polyder.m, polyfit.m, polygcd.m, polyint.m, polyout.m, polyval.m, polyvalm.m, ppder.m, ppint.m, ppjumps.m, ppval.m, residue.m, roots.m, spline.m, intersect.m, ismember.m, powerset.m, setdiff.m, setxor.m, union.m, unique.m, autoreg_matrix.m, bartlett.m, blackman.m, detrend.m, fftconv.m, fftfilt.m, fftshift.m, freqz.m, hamming.m, hanning.m, ifftshift.m, sinc.m, sinetone.m, sinewave.m, unwrap.m, bicg.m, bicgstab.m, gmres.m, gplot.m, nonzeros.m, pcg.m, pcr.m, spaugment.m, spconvert.m, spdiags.m, speye.m, spfun.m, spones.m, sprand.m, sprandsym.m, spstats.m, spy.m, svds.m, treelayout.m, bessel.m, beta.m, betaln.m, factor.m, factorial.m, isprime.m, lcm.m, legendre.m, nchoosek.m, nthroot.m, perms.m, pow2.m, primes.m, reallog.m, realpow.m, realsqrt.m, hadamard.m, hankel.m, hilb.m, invhilb.m, magic.m, rosser.m, vander.m, __finish__.m, center.m, cloglog.m, corr.m, cov.m, gls.m, histc.m, iqr.m, kendall.m, kurtosis.m, logit.m, mahalanobis.m, mean.m, meansq.m, median.m, mode.m, moment.m, ols.m, ppplot.m, prctile.m, probit.m, quantile.m, range.m, ranks.m, run_count.m, runlength.m, skewness.m, spearman.m, statistics.m, std.m, table.m, var.m, zscore.m, betacdf.m, betainv.m, betapdf.m, betarnd.m, binocdf.m, binoinv.m, binopdf.m, binornd.m, cauchy_cdf.m, cauchy_inv.m, cauchy_pdf.m, cauchy_rnd.m, chi2cdf.m, chi2inv.m, chi2pdf.m, chi2rnd.m, discrete_cdf.m, discrete_inv.m, discrete_pdf.m, discrete_rnd.m, empirical_cdf.m, empirical_inv.m, empirical_pdf.m, empirical_rnd.m, expcdf.m, expinv.m, exppdf.m, exprnd.m, fcdf.m, finv.m, fpdf.m, frnd.m, gamcdf.m, gaminv.m, gampdf.m, gamrnd.m, geocdf.m, geoinv.m, geopdf.m, geornd.m, hygecdf.m, hygeinv.m, hygepdf.m, hygernd.m, kolmogorov_smirnov_cdf.m, laplace_cdf.m, laplace_inv.m, laplace_pdf.m, laplace_rnd.m, logistic_cdf.m, logistic_inv.m, logistic_pdf.m, logistic_rnd.m, logncdf.m, logninv.m, lognpdf.m, lognrnd.m, nbincdf.m, nbininv.m, nbinpdf.m, nbinrnd.m, normcdf.m, norminv.m, normpdf.m, normrnd.m, poisscdf.m, poissinv.m, poisspdf.m, poissrnd.m, stdnormal_cdf.m, stdnormal_inv.m, stdnormal_pdf.m, stdnormal_rnd.m, tcdf.m, tinv.m, tpdf.m, trnd.m, unidcdf.m, unidinv.m, unidpdf.m, unidrnd.m, unifcdf.m, unifinv.m, unifpdf.m, unifrnd.m, wblcdf.m, wblinv.m, wblpdf.m, wblrnd.m, kolmogorov_smirnov_test.m, kruskal_wallis_test.m, base2dec.m, bin2dec.m, blanks.m, cstrcat.m, deblank.m, dec2base.m, dec2bin.m, dec2hex.m, findstr.m, hex2dec.m, index.m, isletter.m, mat2str.m, rindex.m, str2num.m, strcat.m, strjust.m, strmatch.m, strsplit.m, strtok.m, strtrim.m, strtrunc.m, substr.m, validatestring.m, demo.m, example.m, fail.m, speed.m, addtodate.m, asctime.m, clock.m, ctime.m, date.m, datenum.m, datetick.m, datevec.m, eomday.m, etime.m, is_leap_year.m, now.m: Use Octave coding conventions in all m-file %!test blocks
author Rik <octave@nomad.inbox5.com>
date Mon, 13 Feb 2012 07:29:44 -0800
parents 2cd56a5e3a66
children d63878346099
line wrap: on
line source

## Copyright (C) 1996-2012 John W. Eaton
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn {Function File} {[@var{beta}, @var{sigma}, @var{r}] =} ols (@var{y}, @var{x})
## Ordinary least squares estimation for the multivariate model
## @tex
## $y = x b + e$
## with
## $\bar{e} = 0$, and cov(vec($e$)) = kron ($s, I$)
## @end tex
## @ifnottex
## @w{@math{y = x*b + e}} with
## @math{mean (e) = 0} and @math{cov (vec (e)) = kron (s, I)}.
## @end ifnottex
##  where
## @tex
## $y$ is a $t \times p$ matrix, $x$ is a $t \times k$ matrix,
## $b$ is a $k \times p$ matrix, and $e$ is a $t \times p$ matrix.
## @end tex
## @ifnottex
## @math{y} is a @math{t} by @math{p} matrix, @math{x} is a @math{t} by
## @math{k} matrix, @math{b} is a @math{k} by @math{p} matrix, and
## @math{e} is a @math{t} by @math{p} matrix.
## @end ifnottex
##
## Each row of @var{y} and @var{x} is an observation and each column a
## variable.
##
## The return values @var{beta}, @var{sigma}, and @var{r} are defined as
## follows.
##
## @table @var
## @item beta
## The OLS estimator for @math{b}.
## @tex
## $beta$ is calculated directly via $(x^Tx)^{-1} x^T y$ if the matrix $x^Tx$ is
## of full rank.
## @end tex
## @ifnottex
## @var{beta} is calculated directly via @code{inv (x'*x) * x' * y} if the
## matrix @code{x'*x} is of full rank.
## @end ifnottex
## Otherwise, @code{@var{beta} = pinv (@var{x}) * @var{y}} where
## @code{pinv (@var{x})} denotes the pseudoinverse of @var{x}.
##
## @item sigma
## The OLS estimator for the matrix @var{s},
##
## @example
## @group
## @var{sigma} = (@var{y}-@var{x}*@var{beta})'
##   * (@var{y}-@var{x}*@var{beta})
##   / (@var{t}-rank(@var{x}))
## @end group
## @end example
##
## @item r
## The matrix of OLS residuals, @code{@var{r} = @var{y} - @var{x}*@var{beta}}.
## @end table
## @seealso{gls, pinv}
## @end deftypefn

## Author: Teresa Twaroch <twaroch@ci.tuwien.ac.at>
## Created: May 1993
## Adapted-By: jwe

function [beta, sigma, r] = ols (y, x)

  if (nargin != 2)
    print_usage ();
  endif

  if (! (isnumeric (x) && isnumeric (y)))
    error ("ols: X and Y must be numeric matrices or vectors");
  endif

  if (ndims (x) != 2 || ndims (y) != 2)
    error ("ols: X and Y must be 2-D matrices or vectors");
  endif

  [nr, nc] = size (x);
  [ry, cy] = size (y);
  if (nr != ry)
    error ("ols: number of rows of X and Y must be equal");
  endif

  if (isinteger (x))
    x = double (x);
  endif
  if (isinteger (y))
    y = double (y);
  endif

  ## Start of algorithm
  z = x' * x;
  [u, p] = chol (z);

  if (p)
    beta = pinv (x) * y;
  else
    beta = u \ (u' \ (x' * y));
  endif

  if (isargout (2) || isargout (3))
    r = y - x * beta;
  endif
  if (isargout (2))

    ## z is of full rank, avoid the SVD in rnk
    if (p == 0)
      rnk = columns (z);
    else
      rnk = rank (z);
    endif

    sigma = r' * r / (nr - rnk);
  endif

endfunction


%!test
%! x = [1:5]';
%! y = 3*x + 2;
%! x = [x, ones(5,1)];
%! assert (ols (y,x), [3; 2], 50*eps)

%!test
%! x = [1, 2; 3, 4];
%! y = [1; 2];
%! [b, s, r] = ols (x, y);
%! assert (b, [1.4, 2], 2*eps);
%! assert (s, [0.2, 0; 0, 0], 2*eps);
%! assert (r, [-0.4, 0; 0.2, 0], 2*eps);

%!test
%! x = [1, 2; 3, 4];
%! y = [1; 2];
%! [b, s] = ols (x, y);
%! assert (b, [1.4, 2], 2*eps);
%! assert (s, [0.2, 0; 0, 0], 2*eps);

%!test
%! x = [1, 2; 3, 4];
%! y = [1; 2];
%! b = ols (x, y);
%! assert (b, [1.4, 2], 2*eps);

%% Test input validation
%!error ols ()
%!error ols (1)
%!error ols (1, 2, 3)
%!error ols ([true, true], [1, 2])
%!error ols ([1, 2], [true, true])
%!error ols (ones (2,2,2), ones (2,2))
%!error ols (ones (2,2), ones (2,2,2))
%!error ols (ones (1,2), ones (2,2))