view scripts/statistics/std.m @ 30998:1bf26f913b9c

std.m, var.m: Cleanup functions. * std.m: Re-write documentation to be in present tense per Octave convention. Use lowercase for "all" parameter. Use Texinfo @. to end sentence ending with capital N. Check for zero arguments to function and call print_usage(). Remove BIST tests for empty inputs and bug #62395 which are simply duplicating tests in var.m. Remove input validation tests which are duplicating tests in var.m. * var.m: Re-write documentation to be in present tense per Octave convention. Use lowercase for "all" parameter. Use Texinfo @. to end sentence ending with capital N. Use default in function prototype for third input "dim" to eliminate elseif branch in input validation. Put input validation as close to top of function as possible. Rename "highest_dim" to "max_dim" for clarity & brevity. Rename "ALL" to "all" in error() statements. Replace "strcmp (tolower (...))" with strcmpi. Avoid slow call to isequal().
author Rik <rik@octave.org>
date Sat, 14 May 2022 18:03:35 -0700
parents 5330efaf9476
children 597f3ee61a48
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########################################################################
##
## Copyright (C) 1996-2022 The Octave Project Developers
##
## See the file COPYRIGHT.md in the top-level directory of this
## distribution or <https://octave.org/copyright/>.
##
## This file is part of Octave.
##
## Octave is free software: you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation, either version 3 of the License, or
## (at your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <https://www.gnu.org/licenses/>.
##
########################################################################

## -*- texinfo -*-
## @deftypefn  {} {@var{y} =} std (@var{x})
## @deftypefnx {} {@var{y} =} std (@var{x}, @var{w})
## @deftypefnx {} {@var{y} =} std (@var{x}, @var{w}, @var{dim})
## @deftypefnx {} {@var{y} =} std (@var{x}, @var{w}, @qcode{"ALL"})
## @deftypefnx {} {[@var{y}, @var{mu}] =} std (@dots{})
## Compute the standard deviation of the elements of the vector @var{x}.
##
## The standard deviation is defined as
## @tex
## $$
## {\rm std} (x) = \sigma = \sqrt{{\sum_{i=1}^N (x_i - \bar{x})^2 \over N - 1}}
## $$
## where $\bar{x}$ is the mean value of @var{x} and $N$ is the number of elements of @var{x}.
## @end tex
## @ifnottex
##
## @example
## @group
## std (@var{x}) = sqrt ( 1/(N-1) SUM_i (@var{x}(i) - mean(@var{x}))^2 )
## @end group
## @end example
##
## @noindent
## where @math{N} is the number of elements of the @var{x} vector.
## @end ifnottex
##
## If @var{x} is an array, compute the standard deviation for each column and
## return them in a row vector (or for an n-D array, the result is returned as
## an array of dimension 1 x n x m x @dots{}).
##
## The optional argument @var{w} determines the weighting scheme to use.  Valid
## values are:
##
## @table @asis
## @item 0 [default]:
## Normalize with @math{N-1}.  This provides the square root of the best
## unbiased estimator of the variance.
##
## @item 1:
## Normalize with @math{N}@.  This provides the square root of the second
## moment around the mean.
##
## @item a vector:
## Compute the weighted standard deviation with non-negative scalar weights.
## The length of @var{w} must equal the size of @var{x} along dimension
## @var{dim}.
## @end table
##
## If @math{N} is equal to 1 the value of @var{W} is ignored and normalization
## by @math{N} is used.
##
## The optional variable @var{dim} forces @code{std} to operate over the
## specified dimension(s).  @var{dim} can either be a scalar dimension or a
## vector of non-repeating dimensions.  Dimensions must be positive integers,
## and the standard deviation is calculated over the array slice defined by
## @var{dim}.
##
## Specifying dimension @qcode{"all"} will force @code{std} to operate on all
## elements of @var{x}, and is equivalent to @code{std (@var{x}(:))}.
##
## When @var{dim} is a vector or @qcode{"all"}, @var{w} must be either 0 or 1.
##
## The optional second output variable @var{mu} contains the mean or weighted
## mean used to calculate @var{y}, and will be the same size as @var{y}.
## @seealso{var, bounds, mad, range, iqr, mean, median}
## @end deftypefn

function [y, mu] = std (varargin)

  if (nargin < 1)
    print_usage ();
  endif

  if (nargout < 2)
    y = sqrt (var (varargin{:}));
  else
    [y, mu] = var (varargin{:});
    y = sqrt (y);
  endif

endfunction


%!test
%! x = ones (10, 2);
%! y = [1, 3];
%! assert (std (x), [0, 0]);
%! assert (std (y), sqrt (2), sqrt (eps));
%! assert (std (x, 0, 2), zeros (10, 1));

%!assert (std (ones (3, 1, 2), 0, 2), zeros (3, 1, 2))
%!assert (std ([1 2], 0), sqrt (2)/2, 5*eps)
%!assert (std ([1 2], 1), 0.5, 5*eps)
%!assert (std (1), 0)
%!assert (std (single (1)), single (0))
%!assert (std ([1 2 3], [], 3), [0 0 0])

## Test input validation
%!error <Invalid call> std ()