view scripts/ode/odeset.m @ 20634:80e630b37ba1

maint: Remove unnecessary 'v' prefix before variables in ODE m-files. * ode_rk_interpolate.m: Deleted file. * odepkg_event_handle.m: Deleted file. * runge_kutta_interpolate.m: Renamed from ode_rk_interpolate.m. Remove 'v' prefix on variables. Delete blank space at end of lines. * ode_event_handler.m: Renamed from odepkg_event_handle.m. Remove 'v' prefix on variables. Delete blank space at end of lines. Use 'evt' for event rather than 'eve' in variable names. Use 'idx' rather than 'index' in variable names. * scripts/ode/module.mk: Add ode_event_handler.m and runge_kutta_interpolate.m to build system. * AbsRel_Norm.m, starting_stepsize.m, ode_struct_value_check.m, odeget.m, odeset.m: Delete blank space at end of lines. * integrate_adaptive, integrate_const.m, integrate_n_steps.m, runge_kutta_45_dorpri.m: Remove 'v' prefix on variable. Delete blank space at end of lines. * ode45.m: Expand docstring to cover more of the inputs/outputs. Remove 'v' prefix on variable. Use name of variable in input validation warnings. Use name of function as prefix in warnings and error messages. Delete long, unnecessary comments. Use faster 'isempty' rather than slow 'isequal' to check whether option has been set. Remove SubOpts variable. Shorten lines < 80 chars.
author Rik <rik@octave.org>
date Sun, 18 Oct 2015 09:55:41 -0700
parents 00caf63edcdf
children 6e81f4b37e13
line wrap: on
line source

## Copyright (C) 2013, Roberto Porcu' <roberto.porcu@polimi.it>
## Copyright (C) 2006-2012, Thomas Treichl <treichl@users.sourceforge.net>
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn  {Function File} {} odeset ()
## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{})
## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{oldstruct}, @var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{})
## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{oldstruct}, @var{newstruct})
##
## Create or modify an ODE options structure.
##
## When called without an input argument, return a new ODE options structure
## that contains all possible fields initialized to their default values.
##
## If called with string input arguments @var{"field1"}, @var{"field2"},
## @dots{} identifying valid ODE options then return a new ODE options
## structure with all possible fields initialized @strong{and} set the values
## of the fields @var{"field1"}, @var{"field2"}, @dots{} to the values
## @var{value1}, @var{value2}, @dots{}
##
## If called with an input structure @var{oldstruct} then overwrite the values
## of the options @var{"field1"}, @var{"field2"}, @dots{} with new values
## @var{value1}, @var{value2}, @dots{} and return the modified structure.
##
## When called with two input ODE options structures @var{oldstruct} and
## @var{newstruct} overwrite all values from the structure @var{oldstruct} with
## new values from the structure @var{newstruct}.  Empty values in
## @var{newstruct} will not overwrite values in @var{oldstruct}.
## @seealso{odeget}
## @end deftypefn

function odestruct = odeset (varargin)

  ## Special calling syntax to display defaults
  if (nargin == 0 && nargout == 0)
    print_options ();
    return;
  endif

  ## Column vector of all possible ODE options
  persistent options = {"AbsTol"; "BDF"; "Events"; "InitialSlope";
                        "InitialStep"; "Jacobian"; "JConstant"; "JPattern";
                        "Mass"; "MassConstant"; "MassSingular"; "MaxOrder";
                        "MaxStep"; "MStateDependence"; "MvPattern";
                        "NonNegative"; "NormControl"; "OutputFcn"; "OutputSel";
                        "Refine"; "RelTol"; "Stats"; "Vectorized"};

  ## initialize output
  odestruct = cell2struct (cell (numel (options), 1), options);

  if (nargin == 0)
    return;
  endif

  if (isstruct (varargin{1}))
    oldstruct = varargin{1};

    ## Copy oldstruct values into output odestruct
    for [val, name] = oldstruct

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = val;
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = val;
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif

      if (nargin == 1)
        ## Check if all changes have resulted in a valid ODEOPT struct
        ode_struct_value_check ("odeset", odestruct);
        return;
      endif

    endfor

    ## At this point, odestruct has been initialized with default values,
    ## and if oldstruct was present it has overwritten fields in odestruct.

    if (nargin == 2 && isstruct (varargin{2}))
      newstruct = varargin{2};

      ## Update the first struct with the values from the second one
      for [val, name] = newstruct

        exactmatch = true;
        match = find (strcmpi (name, options));
        if (isempty (match))
          match = find (strncmpi (name, options, length (name)));
          exactmatch = false;
        endif

        if (isempty (match))
          odestruct.(name) = val;
        elseif (numel (match) == 1)
          if (! exactmatch)
            warning ("odeset:NoExactMatching",
                     "no exact match for '%s'.  Assuming '%s'.",
                     name, options{match});
          endif
          odestruct.(options{match}) = val;
        else
          error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
                 name, strjoin (options(match), ", "));
        endif
      endfor

      ## Check if all changes have resulted in a valid ODEOPT struct
      ode_struct_value_check ("odeset", odestruct);
      return;
    endif

    ## Second argument is not a struct
    if (mod (nargin, 2) != 1)
      error ("odeset: FIELD/VALUE arguments must occur in pairs");
    endif
    if (! all (cellfun ("isclass", varargin(2:2:end), "char")))
      error ("odeset: All FIELD names must be strings");
    endif

    ## Write new field/value pairs into odestruct
    for i = 2:2:nargin
      name = varargin{i};

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = varargin{i+1};
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = varargin{i+1};
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif
    endfor

    ## Check if all changes have resulted in a valid ODEOPT struct
    ode_struct_value_check ("odeset", odestruct);

  else
    ## First input argument was not a struct, must be field/value pairs
    if (mod (nargin, 2) != 0)
      error ("odeset: FIELD/VALUE arguments must occur in pairs");
    elseif (! all (cellfun ("isclass", varargin(1:2:end), "char")))
      error ("odeset: All FIELD names must be strings");
    endif

    for i = 1:2:nargin
      name = varargin{i};

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = varargin{i+1};
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = varargin{i+1};
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif
    endfor

    ## Check if all changes have resulted in a valid ODEOPT struct
    ode_struct_value_check ("odeset", odestruct);

  endif

endfunction

## function to print all possible options
function print_options ()

  disp ("List of all possible ODE solver options.");
  disp ("Default values are in square brackets.");
  disp ("");
  disp ("             AbsTol:  scalar or vector, >0, [1e-6]");
  disp ("                BDF:  binary, {'on', ['off']}");
  disp ("             Events:  function_handle, []");
  disp ("       InitialSlope:  vector, []");
  disp ("        InitialStep:  scalar, >0, []");
  disp ("           Jacobian:  matrix or function_handle, []");
  disp ("          JConstant:  binary, {'on', ['off']}");
  disp ("           JPattern:  sparse matrix, []");
  disp ("               Mass:  matrix or function_handle, []");
  disp ("       MassConstant:  binary, {'on', ['off']}");
  disp ("       MassSingular:  switch, {'yes', ['maybe'], 'no'}");
  disp ("           MaxOrder:  switch, {1, 2, 3, 4, [5]}");
  disp ("            MaxStep:  scalar, >0, []");
  disp ("   MStateDependence:  switch, {'none', ['weak'], 'strong'}");
  disp ("          MvPattern:  sparse matrix, []");
  disp ("        NonNegative:  vector of integers, []");
  disp ("        NormControl:  binary, {'on', ['off']}");
  disp ("          OutputFcn:  function_handle, []");
  disp ("          OutputSel:  scalar or vector, []");
  disp ("             Refine:  scalar, integer, >0, []");
  disp ("             RelTol:  scalar, >0, [1e-3]");
  disp ("              Stats:  binary, {'on', ['off']}");
  disp ("         Vectorized:  binary, {'on', ['off']}");

endfunction


%!demo
%! # A new ODE options structure with default values is created.
%!
%! odeoptA = odeset ();

%!demo
%! # A new ODE options structure with manually set options
%! # for "AbsTol" and "RelTol" is created.
%!
%! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1);

%!demo
%! # A new ODE options structure is created from odeoptB with
%! # a modified value for option "NormControl".
%!
%! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1);
%! odeoptC = odeset (odeoptB, "NormControl", "on");

## All tests that are needed to check if a valid option has been set are
## implemented in ode_struct_value_check.m
%!test
%! odeoptA = odeset ();
%! assert (isstruct (odeoptA));
%! assert (numel (fieldnames (odeoptA)), 23);
%! assert (all (structfun ("isempty", odeoptA)));

%!shared odeoptB, odeoptC
%!test
%! odeoptB = odeset ("ABSTOL", 1e-2, "reltol", 1e-1);
%! assert (odeoptB.AbsTol, 1e-2);  # Check canonicalization of name
%! assert (odeoptB.RelTol, 1e-1);

%!test
%! odeoptC = odeset (odeoptB, "NormControl", "on");
%! assert (odeoptC.AbsTol, 1e-2);       # check values from first struct copied
%! assert (odeoptC.NormControl, "on");  # check new values override old ones

%!test
%! odeoptD = odeset (odeoptB, odeoptC);
%! assert (odeoptD, odeoptC);

## Test custom user-defined option
%!test
%! wstate = warning ("off", "Octave:invalid-input-arg");
%! unwind_protect
%!   odeopt = odeset ("NewtonTol", 3);
%!   assert (odeopt.NewtonTol, 3);
%! unwind_protect_cleanup
%!   warning (wstate);
%! end_unwind_protect

## Test input validation
%!error <FIELD/VALUE arguments must occur in pairs> odeset ("opt1")
%!error <FIELD names must be strings> odeset (1, 1)
%!error <FIELD/VALUE arguments must occur in pairs> odeset (odeset (), "opt1")
%!error <FIELD names must be strings> odeset (odeset (), 1, 1)
%!warning <no exact match for 'Rel'.  Assuming 'RelTol'> odeset ("Rel", 1);
%!error <Possible fields found: InitialSlope, InitialStep> odeset ("Initial", 1)