view scripts/ode/odeset.m @ 20934:8d82da0f3439

mark test failure in odeset as xtest * scripts/ode/odeset.m: don't complain about extra options set by odeset.
author Carlo de Falco <carlo.defalco@polimi.it>
date Fri, 18 Dec 2015 08:08:38 +0100
parents 0fb9de5b7903
children 3b2cc6ef0624
line wrap: on
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## Copyright (C) 2013, Roberto Porcu' <roberto.porcu@polimi.it>
## Copyright (C) 2006-2012, Thomas Treichl <treichl@users.sourceforge.net>
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn  {} {} odeset ()
## @deftypefnx {} {@var{odestruct} =} odeset (@var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{})
## @deftypefnx {} {@var{odestruct} =} odeset (@var{oldstruct}, @var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{})
## @deftypefnx {} {@var{odestruct} =} odeset (@var{oldstruct}, @var{newstruct})
##
## Create or modify an ODE options structure.
##
## When called without an input argument, return a new ODE options structure
## that contains all possible fields initialized to their default values.
##
## If called with string input arguments @var{"field1"}, @var{"field2"},
## @dots{} identifying valid ODE options then return a new ODE options
## structure with all possible fields initialized @strong{and} set the values
## of the fields @var{"field1"}, @var{"field2"}, @dots{} to the values
## @var{value1}, @var{value2}, @dots{}
##
## If called with an input structure @var{oldstruct} then overwrite the values
## of the options @var{"field1"}, @var{"field2"}, @dots{} with new values
## @var{value1}, @var{value2}, @dots{} and return the modified structure.
##
## When called with two input ODE options structures @var{oldstruct} and
## @var{newstruct} overwrite all values from the structure @var{oldstruct} with
## new values from the structure @var{newstruct}.  Empty values in
## @var{newstruct} will not overwrite values in @var{oldstruct}.
## @seealso{odeget}
## @end deftypefn

function odestruct = odeset (varargin)

  ## Column vector of all possible ODE options
  persistent options = known_option_names ();

  if (nargin == 0)
    ## Special calling syntax to display defaults
    if (nargout == 0)
      print_options ();
    else
      odestruct = cell2struct (cell (numel (options), 1), options);
    endif
    return;
  endif

  ## initialize output
  odestruct = cell2struct (cell (numel (options), 1), options);

  if (isstruct (varargin{1}))
    oldstruct = varargin{1};

    ## Copy oldstruct values into output odestruct
    for [val, name] = oldstruct

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = val;
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = val;
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif

      if (nargin == 1)
        ## Check if all changes have resulted in a valid ODEOPT struct
        ode_struct_value_check ("odeset", odestruct);
        return;
      endif

    endfor

    ## At this point, odestruct has been initialized with default values,
    ## and if oldstruct was present it has overwritten fields in odestruct.

    if (nargin == 2 && isstruct (varargin{2}))
      newstruct = varargin{2};

      ## Update the first struct with the values from the second one
      for [val, name] = newstruct

        exactmatch = true;
        match = find (strcmpi (name, options));
        if (isempty (match))
          match = find (strncmpi (name, options, length (name)));
          exactmatch = false;
        endif

        if (isempty (match))
          odestruct.(name) = val;
        elseif (numel (match) == 1)
          if (! exactmatch)
            warning ("odeset:NoExactMatching",
                     "no exact match for '%s'.  Assuming '%s'.",
                     name, options{match});
          endif
          odestruct.(options{match}) = val;
        else
          error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
                 name, strjoin (options(match), ", "));
        endif
      endfor

      ## Check if all changes have resulted in a valid ODEOPT struct
      ode_struct_value_check ("odeset", odestruct);
      return;
    endif

    ## Second argument is not a struct
    if (mod (nargin, 2) != 1)
      error ("odeset: FIELD/VALUE arguments must occur in pairs");
    endif
    if (! all (cellfun ("isclass", varargin(2:2:end), "char")))
      error ("odeset: All FIELD names must be strings");
    endif

    ## Write new field/value pairs into odestruct
    for i = 2:2:nargin
      name = varargin{i};

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = varargin{i+1};
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = varargin{i+1};
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif
    endfor

    ## Check if all changes have resulted in a valid ODEOPT struct
    ode_struct_value_check ("odeset", odestruct);

  else
    ## First input argument was not a struct, must be field/value pairs
    if (mod (nargin, 2) != 0)
      error ("odeset: FIELD/VALUE arguments must occur in pairs");
    elseif (! all (cellfun ("isclass", varargin(1:2:end), "char")))
      error ("odeset: All FIELD names must be strings");
    endif

    for i = 1:2:nargin
      name = varargin{i};

      exactmatch = true;
      match = find (strcmpi (name, options));
      if (isempty (match))
        match = find (strncmpi (name, options, length (name)));
        exactmatch = false;
      endif

      if (isempty (match))
        odestruct.(name) = varargin{i+1};
      elseif (numel (match) == 1)
        if (! exactmatch)
          warning ("odeset:NoExactMatching",
                   "no exact match for '%s'.  Assuming '%s'.",
                   name, options{match});
        endif
        odestruct.(options{match}) = varargin{i+1};
      else
        error ("odeset: no exact match for '%s'.  Possible fields found: %s.",
               name, strjoin (options(match), ", "));
      endif
    endfor

    ## Check if all changes have resulted in a valid ODEOPT struct
    ode_struct_value_check ("odeset", odestruct);

  endif

endfunction

## function to print all possible options
function print_options ()

  disp ("List of all possible ODE solver options.");
  disp ("Default values are in square brackets.");
  disp ("");
  disp ("             AbsTol:  scalar or vector, >0, [1e-6]");
  disp ("                BDF:  binary, {'on', ['off']}");
  disp ("             Events:  function_handle, []");
  disp ("       InitialSlope:  vector, []");
  disp ("        InitialStep:  scalar, >0, []");
  disp ("           Jacobian:  matrix or function_handle, []");
  disp ("          JConstant:  binary, {'on', ['off']}");
  disp ("           JPattern:  sparse matrix, []");
  disp ("               Mass:  matrix or function_handle, []");
  disp ("       MassConstant:  binary, {'on', ['off']}");
  disp ("       MassSingular:  switch, {'yes', ['maybe'], 'no'}");
  disp ("           MaxOrder:  switch, {1, 2, 3, 4, [5]}");
  disp ("            MaxStep:  scalar, >0, []");
  disp ("   MStateDependence:  switch, {'none', ['weak'], 'strong'}");
  disp ("          MvPattern:  sparse matrix, []");
  disp ("        NonNegative:  vector of integers, []");
  disp ("        NormControl:  binary, {'on', ['off']}");
  disp ("          OutputFcn:  function_handle, []");
  disp ("          OutputSel:  scalar or vector, []");
  disp ("             Refine:  scalar, integer, >0, []");
  disp ("             RelTol:  scalar, >0, [1e-3]");
  disp ("              Stats:  binary, {'on', ['off']}");
  disp ("         Vectorized:  binary, {'on', ['off']}");

endfunction


%!demo
%! # A new ODE options structure with default values is created.
%!
%! odeoptA = odeset ();

%!demo
%! # A new ODE options structure with manually set options
%! # for "AbsTol" and "RelTol" is created.
%!
%! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1);

%!demo
%! # A new ODE options structure is created from odeoptB with
%! # a modified value for option "NormControl".
%!
%! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1);
%! odeoptC = odeset (odeoptB, "NormControl", "on");

## All tests that are needed to check if a valid option has been set are
## implemented in ode_struct_value_check.m
## ## FIXME ## currently fails as there are two extra options to control
##             fixed step integratio options.
%!xtest
%! odeoptA = odeset ();
%! assert (isstruct (odeoptA));
%! assert (numel (fieldnames (odeoptA)), 23);
%! assert (all (structfun ("isempty", odeoptA)));

%!shared odeoptB, odeoptC
%!test
%! odeoptB = odeset ("ABSTOL", 1e-2, "reltol", 1e-1);
%! assert (odeoptB.AbsTol, 1e-2);  # Check canonicalization of name
%! assert (odeoptB.RelTol, 1e-1);

%!test
%! odeoptC = odeset (odeoptB, "NormControl", "on");
%! assert (odeoptC.AbsTol, 1e-2);       # check values from first struct copied
%! assert (odeoptC.NormControl, "on");  # check new values override old ones

%!test
%! odeoptD = odeset (odeoptB, odeoptC);
%! assert (odeoptD, odeoptC);

## Test custom user-defined option
%!test
%! wstate = warning ("off", "Octave:invalid-input-arg");
%! unwind_protect
%!   odeopt = odeset ("NewtonTol", 3);
%!   assert (odeopt.NewtonTol, 3);
%! unwind_protect_cleanup
%!   warning (wstate);
%! end_unwind_protect

## Test input validation
%!error <FIELD/VALUE arguments must occur in pairs> odeset ("opt1")
%!error <FIELD names must be strings> odeset (1, 1)
%!error <FIELD/VALUE arguments must occur in pairs> odeset (odeset (), "opt1")
%!error <FIELD names must be strings> odeset (odeset (), 1, 1)
%!warning <no exact match for 'Rel'.  Assuming 'RelTol'> odeset ("Rel", 1);
%!error <Possible fields found: InitialSlope, InitialStep> odeset ("Initial", 1)