view scripts/statistics/kurtosis.m @ 24547:fdc9ce839afd

maint: Remove statistics functions which have been shifted to Octave Forge package. * NEWS: Announce list of functions removed from core. * scripts/statistics/center.m, scripts/statistics/corr.m, scripts/statistics/corrcoef.m, scripts/statistics/cov.m, scripts/statistics/discrete_cdf.m, scripts/statistics/discrete_inv.m, scripts/statistics/discrete_pdf.m, scripts/statistics/discrete_rnd.m, scripts/statistics/empirical_cdf.m, scripts/statistics/empirical_inv.m, scripts/statistics/empirical_pdf.m, scripts/statistics/empirical_rnd.m, scripts/statistics/histc.m, scripts/statistics/iqr.m, scripts/statistics/kendall.m, scripts/statistics/kurtosis.m, scripts/statistics/mean.m, scripts/statistics/meansq.m, scripts/statistics/median.m, scripts/statistics/mode.m, scripts/statistics/module.mk, scripts/statistics/moment.m, scripts/statistics/prctile.m, scripts/statistics/quantile.m, scripts/statistics/range.m, scripts/statistics/ranks.m, scripts/statistics/run_count.m, scripts/statistics/runlength.m, scripts/statistics/skewness.m, scripts/statistics/spearman.m, scripts/statistics/statistics.m, scripts/statistics/std.m, scripts/statistics/var.m, scripts/statistics/zscore.m: Moved from scripts/statistics/base. * scripts/module.mk: Update build system. Remove @include for directories base/, tests/, models/, distributions/. * octave.texi: Update @detailmenu. * stats.txi: Rewrite statistics chapter with condensed list of functions. * scripts/statistics/base/module.mk, scripts/statistics/distributions/module.mk, scripts/statistics/models/module.mk scripts/statistics/tests/module.mk: Removed from build system. * scripts/statistics/base/cloglog.m, scripts/statistics/base/crosstab.m, scripts/statistics/base/logit.m, scripts/statistics/base/moment.m, scripts/statistics/base/ppplot.m, scripts/statistics/base/probit.m, scripts/statistics/base/qqplot.m, scripts/statistics/distributions/betacdf.m, scripts/statistics/distributions/betainv.m, scripts/statistics/distributions/betapdf.m, scripts/statistics/distributions/betarnd.m, scripts/statistics/distributions/binocdf.m, scripts/statistics/distributions/binoinv.m, scripts/statistics/distributions/binopdf.m, scripts/statistics/distributions/binornd.m, scripts/statistics/distributions/cauchy_cdf.m, scripts/statistics/distributions/cauchy_inv.m, scripts/statistics/distributions/cauchy_pdf.m, scripts/statistics/distributions/cauchy_rnd.m, scripts/statistics/distributions/chi2cdf.m, scripts/statistics/distributions/chi2inv.m, scripts/statistics/distributions/chi2pdf.m, scripts/statistics/distributions/chi2rnd.m, scripts/statistics/distributions/discrete_cdf.m, scripts/statistics/distributions/discrete_inv.m, scripts/statistics/distributions/discrete_pdf.m, scripts/statistics/distributions/discrete_rnd.m, scripts/statistics/distributions/empirical_cdf.m, scripts/statistics/distributions/empirical_inv.m, scripts/statistics/distributions/empirical_pdf.m, scripts/statistics/distributions/empirical_rnd.m, scripts/statistics/distributions/expcdf.m, scripts/statistics/distributions/expinv.m, scripts/statistics/distributions/exppdf.m, scripts/statistics/distributions/exprnd.m, scripts/statistics/distributions/fcdf.m, scripts/statistics/distributions/finv.m, scripts/statistics/distributions/fpdf.m, scripts/statistics/distributions/frnd.m, scripts/statistics/distributions/gamcdf.m, scripts/statistics/distributions/gaminv.m, scripts/statistics/distributions/gampdf.m, scripts/statistics/distributions/gamrnd.m, scripts/statistics/distributions/geocdf.m, scripts/statistics/distributions/geoinv.m, scripts/statistics/distributions/geopdf.m, scripts/statistics/distributions/geornd.m, scripts/statistics/distributions/hygecdf.m, scripts/statistics/distributions/hygeinv.m, scripts/statistics/distributions/hygepdf.m, scripts/statistics/distributions/hygernd.m, scripts/statistics/distributions/kolmogorov_smirnov_cdf.m, scripts/statistics/distributions/laplace_cdf.m, scripts/statistics/distributions/laplace_inv.m, scripts/statistics/distributions/laplace_pdf.m, scripts/statistics/distributions/laplace_rnd.m, scripts/statistics/distributions/logistic_cdf.m, scripts/statistics/distributions/logistic_inv.m, scripts/statistics/distributions/logistic_pdf.m, scripts/statistics/distributions/logistic_rnd.m, scripts/statistics/distributions/logncdf.m, scripts/statistics/distributions/logninv.m, scripts/statistics/distributions/lognpdf.m, scripts/statistics/distributions/lognrnd.m, scripts/statistics/distributions/nbincdf.m, scripts/statistics/distributions/nbininv.m, scripts/statistics/distributions/nbinpdf.m, scripts/statistics/distributions/nbinrnd.m, scripts/statistics/distributions/normcdf.m, scripts/statistics/distributions/norminv.m, scripts/statistics/distributions/normpdf.m, scripts/statistics/distributions/normrnd.m, scripts/statistics/distributions/poisscdf.m, scripts/statistics/distributions/poissinv.m, scripts/statistics/distributions/poisspdf.m, scripts/statistics/distributions/poissrnd.m, scripts/statistics/distributions/stdnormal_cdf.m, scripts/statistics/distributions/stdnormal_inv.m, scripts/statistics/distributions/stdnormal_pdf.m, scripts/statistics/distributions/stdnormal_rnd.m, scripts/statistics/distributions/tcdf.m, scripts/statistics/distributions/tinv.m, scripts/statistics/distributions/tpdf.m, scripts/statistics/distributions/trnd.m, scripts/statistics/distributions/unidcdf.m, scripts/statistics/distributions/unidinv.m, scripts/statistics/distributions/unidpdf.m, scripts/statistics/distributions/unidrnd.m, scripts/statistics/distributions/unifcdf.m, scripts/statistics/distributions/unifinv.m, scripts/statistics/distributions/unifpdf.m, scripts/statistics/distributions/unifrnd.m, scripts/statistics/distributions/wblcdf.m, scripts/statistics/distributions/wblinv.m, scripts/statistics/distributions/wblpdf.m, scripts/statistics/distributions/wblrnd.m, scripts/statistics/distributions/wienrnd.m, scripts/statistics/models/logistic_regression.m, scripts/statistics/models/private/logistic_regression_derivatives.m, scripts/statistics/models/private/logistic_regression_likelihood.m, scripts/statistics/tests/anova.m, scripts/statistics/tests/bartlett_test.m, scripts/statistics/tests/chisquare_test_homogeneity.m, scripts/statistics/tests/chisquare_test_independence.m, scripts/statistics/tests/cor_test.m, scripts/statistics/tests/f_test_regression.m, scripts/statistics/tests/hotelling_test.m, scripts/statistics/tests/hotelling_test_2.m, scripts/statistics/tests/kolmogorov_smirnov_test.m, scripts/statistics/tests/kolmogorov_smirnov_test_2.m, scripts/statistics/tests/kruskal_wallis_test.m, scripts/statistics/tests/manova.m, scripts/statistics/tests/mcnemar_test.m, scripts/statistics/tests/prop_test_2.m, scripts/statistics/tests/run_test.m, scripts/statistics/tests/sign_test.m, scripts/statistics/tests/t_test.m, scripts/statistics/tests/t_test_2.m, scripts/statistics/tests/t_test_regression.m, scripts/statistics/tests/u_test.m, scripts/statistics/tests/var_test.m, scripts/statistics/tests/welch_test.m, scripts/statistics/tests/wilcoxon_test.m, scripts/statistics/tests/z_test.m, scripts/statistics/tests/z_test_2.m: Removed functions.
author Rik <rik@octave.org>
date Sun, 07 Jan 2018 17:13:23 -0800
parents scripts/statistics/base/kurtosis.m@194eb4bd202b
children d85b2485af9e
line wrap: on
line source

## Copyright (C) 2013-2017 Julien Bect
## Copyright (C) 1996-2016 John W. Eaton
##
## This file is part of Octave.
##
## Octave is free software: you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation, either version 3 of the License, or
## (at your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <https://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn  {} {} kurtosis (@var{x})
## @deftypefnx {} {} kurtosis (@var{x}, @var{flag})
## @deftypefnx {} {} kurtosis (@var{x}, @var{flag}, @var{dim})
## Compute the sample kurtosis of the elements of @var{x}.
##
## The sample kurtosis is defined as
## @tex
## $$
## \kappa_1 = {{{1\over N}\,
##          \sum_{i=1}^N (x_i - \bar{x})^4} \over \sigma^4},
## $$
## where $N$ is the length of @var{x}, $\bar{x}$ its mean, and $\sigma$
## its (uncorrected) standard deviation.
## @end tex
## @ifnottex
##
## @example
## @group
##      mean ((@var{x} - mean (@var{x})).^4)
## k1 = ------------------------
##             std (@var{x}).^4
## @end group
## @end example
##
## @end ifnottex
##
## @noindent
## The optional argument @var{flag} controls which normalization is used.
## If @var{flag} is equal to 1 (default value, used when @var{flag} is omitted
## or empty), return the sample kurtosis as defined above.  If @var{flag} is
## equal to 0, return the @w{"bias-corrected"} kurtosis coefficient instead:
## @tex
## $$
## \kappa_0 = 3 + {\scriptstyle N - 1 \over \scriptstyle (N - 2)(N - 3)} \,
##     \left( (N + 1)\, \kappa_1 - 3 (N - 1) \right)
## $$
## @end tex
## @ifnottex
##
## @example
## @group
##               N - 1
## k0 = 3 + -------------- * ((N + 1) * k1 - 3 * (N - 1))
##          (N - 2)(N - 3)
## @end group
## @end example
##
## where @math{N} is the length of the @var{x} vector.
##
## @end ifnottex
## The bias-corrected kurtosis coefficient is obtained by replacing the sample
## second and fourth central moments by their unbiased versions.  It is an
## unbiased estimate of the population kurtosis for normal populations.
##
## If @var{x} is a matrix, or more generally a multi-dimensional array, return
## the kurtosis along the first non-singleton dimension.  If the optional
## @var{dim} argument is given, operate along this dimension.
##
## @seealso{var, skewness, moment}
## @end deftypefn

## Author: KH <Kurt.Hornik@wu-wien.ac.at>
## Created: 29 July 1994
## Adapted-By: jwe

function y = kurtosis (x, flag, dim)

  if (nargin < 1) || (nargin > 3)
    print_usage ();
  endif

  if (! (isnumeric (x) || islogical (x)))
    error ("kurtosis: X must be a numeric vector or matrix");
  endif

  if (nargin < 2 || isempty (flag))
    flag = 1;  # default: do not use the "bias corrected" version
  else
    if (! isscalar (flag) || (flag != 0 && flag != 1))
      error ("kurtosis: FLAG must be 0 or 1");
    endif
  endif

  nd = ndims (x);
  sz = size (x);
  if (nargin < 3)
    ## Find the first non-singleton dimension.
    (dim = find (sz > 1, 1)) || (dim = 1);
  else
    if (! (isscalar (dim) && dim == fix (dim) && dim > 0))
      error ("kurtosis: DIM must be an integer and a valid dimension");
    endif
  endif

  n = size (x, dim);
  sz(dim) = 1;

  x = center (x, dim);   # center also promotes integer, logical to double
  v = var (x, 1, dim);   # normalize with 1/N
  y = sum (x .^ 4, dim);
  idx = (v != 0);
  y(idx) = y(idx) ./ (n * v(idx) .^ 2);
  y(! idx) = NaN;

  ## Apply bias correction to the second and fourth central sample moment
  if (flag == 0)
    if (n > 3)
      C = (n - 1) / ((n - 2) * (n - 3));
      y = 3 + C * ((n + 1) * y - 3 * (n - 1));
    else
      y(:) = NaN;
    endif
  endif

endfunction


%!test
%! x = [-1; 0; 0; 0; 1];
%! y = [x, 2*x];
%! assert (kurtosis (y), [2.5, 2.5], sqrt (eps));

%!assert (kurtosis ([-3, 0, 1]) == kurtosis ([-1, 0, 3]))
%!assert (kurtosis (ones (3, 5)), NaN (1, 5))
%!assert (kurtosis (1, [], 3), NaN)

%!assert (kurtosis ([1:5 10; 1:5 10],  0, 2), 5.4377317925288901 * [1; 1], 8 * eps)
%!assert (kurtosis ([1:5 10; 1:5 10],  1, 2), 2.9786509002956195 * [1; 1], 8 * eps)
%!assert (kurtosis ([1:5 10; 1:5 10], [], 2), 2.9786509002956195 * [1; 1], 8 * eps)

## Test behavior on single input
%!assert (kurtosis (single ([1:5 10])), single (2.9786513), eps ("single"))
%!assert (kurtosis (single ([1 2]), 0), single (NaN))

## Verify no "divide-by-zero" warnings
%!test
%! warning ("on", "Octave:divide-by-zero", "local");
%! lastwarn ("");  # clear last warning
%! kurtosis (1);
%! assert (lastwarn (), "");

## Test input validation
%!error kurtosis ()
%!error kurtosis (1, 2, 3)
%!error <X must be a numeric vector or matrix> kurtosis (['A'; 'B'])
%!error <FLAG must be 0 or 1> kurtosis (1, 2)
%!error <FLAG must be 0 or 1> kurtosis (1, [1 0])
%!error <DIM must be an integer> kurtosis (1, [], ones (2,2))
%!error <DIM must be an integer> kurtosis (1, [], 1.5)
%!error <DIM must be .* a valid dimension> kurtosis (1, [], 0)