view scripts/sparse/bicgstab.m @ 13141:e81ddf9cacd5

maint: untabify and remove trailing whitespace from source files * bicg.m, gmres.m, pkg.m: Untabify and remove trailing whitespace. * libcruft/Makefile.am, libcruft/blas-xtra/cdotc3.f, libcruft/blas-xtra/cmatm3.f, libcruft/blas-xtra/ddot3.f, libcruft/blas-xtra/dmatm3.f, libcruft/blas-xtra/sdot3.f, libcruft/blas-xtra/smatm3.f, libcruft/blas-xtra/zdotc3.f, libcruft/blas-xtra/zmatm3.f, libcruft/lapack-xtra/crsf2csf.f, libcruft/lapack-xtra/zrsf2csf.f, liboctave/Array.cc, liboctave/DASPK-opts.in, liboctave/DASRT-opts.in, liboctave/DASSL-opts.in, liboctave/LSODE-opts.in, liboctave/Makefile.a,mliboctave/Quad-opts.in, liboctave/Sparse-perm-op-defs.h, scripts/Makefile.a,mscripts/deprecated/glpkmex.m, scripts/general/blkdiag.m, scripts/general/interp1.m, scripts/general/profshow.m, scripts/general/quadl.m, scripts/general/triplequad.m, scripts/help/__makeinfo__.m, scripts/io/strread.m, scripts/io/textread.m, scripts/io/textscan.m, scripts/linear-algebra/rank.m, scripts/miscellaneous/gzip.m, scripts/miscellaneous/private/__xzip__.m, scripts/miscellaneous/tempdir.m, scripts/miscellaneous/unpack.m, scripts/pkg/pkg.m, scripts/plot/allchild.m, scripts/plot/ancestor.m, scripts/plot/cla.m, scripts/plot/clf.m, scripts/plot/findall.m, scripts/plot/findobj.m, scripts/plot/gca.m, scripts/plot/gcf.m, scripts/plot/hggroup.m, scripts/plot/isfigure.m, scripts/plot/ishghandle.m, scripts/plot/legend.m, scripts/plot/line.m, scripts/plot/loglog.m, scripts/plot/patch.m, scripts/plot/print.m, scripts/plot/private/__quiver__.m, scripts/plot/private/__scatter__.m, scripts/plot/rectangle.m, scripts/plot/semilogx.m, scripts/plot/semilogy.m, scripts/plot/surface.m, scripts/plot/text.m, scripts/plot/title.m, scripts/plot/trisurf.m, scripts/plot/view.m, scripts/plot/whitebg.m, scripts/plot/xlabel.m, scripts/plot/xlim.m, scripts/plot/ylabel.m, scripts/plot/ylim.m, scripts/plot/zlabel.m, scripts/plot/zlim.m, scripts/polynomial/mkpp.m, scripts/polynomial/polygcd.m, scripts/polynomial/ppint.m, scripts/polynomial/ppjumps.m, scripts/polynomial/ppval.m, scripts/set/setxor.m, scripts/sparse/bicgstab.m, scripts/sparse/cgs.m, scripts/sparse/spconvert.m, scripts/specfun/nthroot.m, scripts/strings/strmatch.m, scripts/strings/untabify.m, scripts/testfun/demo.m, scripts/testfun/example.m, src/DLD-FUNCTIONS/filter.cc, src/DLD-FUNCTIONS/mgorth.cc, src/DLD-FUNCTIONS/quadcc.cc, src/DLD-FUNCTIONS/str2double.cc, src/Makefile.a,msrc/gl-render.cc, src/gl2ps-renderer.cc, src/graphics.cc, src/octave-config.cc.in, src/octave-config.in, src/ov-class.h, src/ov-fcn.h, src/profiler.cc, src/profiler.h, src/pt-binop.cc, src/pt-unop.cc, src/symtab.cc, src/txt-eng-ft.cc: Remove trailing whitespace.
author John W. Eaton <jwe@octave.org>
date Thu, 15 Sep 2011 12:51:10 -0400
parents e5aaba072d2b
children 2c80bbd87f5d
line wrap: on
line source

## Copyright (C) 2008-2011 Radek Salac
## Copyright (C) 2011 Carlo de Falco
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
##
## @deftypefn {Function File} {@var{x} =} bicgstab (@var{A}, @var{b}, @var{rtol}, @var{maxit}, @var{M1}, @var{M2}, @var{x0})
## @deftypefnx {Function File} {@var{x} =} bicgstab (@var{A}, @var{b}, @var{rtol}, @var{maxit}, @var{P})
## @deftypefnx {Function File} {[@var{x}, @var{flag}, @var{relres}, @var{iter}, @var{resvec}] =} bicgstab (@var{A}, @var{b}, ...)
## Solve @code{A x = b} using the stabilizied Bi-conjugate gradient iterative method.
##
## @itemize @minus
## @item @var{rtol} is the relative tolerance, if not given or set to
## [] the default value 1e-6 is used.
## @item @var{maxit} the maximum number of outer iterations, if not
## given or set to [] the default value @code{min (20, numel (b))} is
## used.
## @item @var{x0} the initial guess, if not given or set to [] the
## default value @code{zeros (size (b))} is used.
## @end itemize
##
## @var{A} can be passed as a matrix or as a function handle or
## inline function @code{f} such that @code{f(x) = A*x}.
##
## The preconditioner @var{P} is given as @code{P = M1 * M2}.
## Both @var{M1} and @var{M2} can be passed as a matrix or as a function handle or
## inline function @code{g} such that @code{g(x) = M1 \ x} or @code{g(x) = M2 \ x}.
##
## If called with more than one output parameter
##
## @itemize @minus
## @item @var{flag} indicates the exit status:
## @itemize @minus
## @item 0: iteration converged to the within the chosen tolerance
## @item 1: the maximum number of iterations was reached before convergence
## @item 3: the algorithm reached stagnation
## @end itemize
## (the value 2 is unused but skipped for compatibility).
## @item @var{relres} is the final value of the relative residual.
## @item @var{iter} is the number of iterations performed.
## @item @var{resvec} is a vector containing the relative residual at each iteration.
## @end itemize
##
## @seealso{bicg,cgs,gmres,pcg}
##
## @end deftypefn

function [x, flag, relres, iter, resvec] = bicgstab (A, b, tol, maxit,
                                                     M1, M2, x0)

  if (nargin >= 2 && nargin <= 7 && isvector (full (b)))

    if (ischar (A))
      A = str2func (A);
    elseif (ismatrix (A))
      Ax  = @(x) A  * x;
    elseif (isa (A, "function_handle"))
      Ax  = @(x) feval (A, x);
    else
      error (["bicgstab: first argument is expected " ...
              "to be a function or a square matrix"]);
    endif

    if (nargin < 3 || isempty (tol))
      tol = 1e-6;
    endif

    if (nargin < 4 || isempty (maxit))
      maxit = min (rows (b), 20);
    endif

    if (nargin < 5 || isempty (M1))
      M1m1x = @(x) x;
    elseif (ischar (M1))
      M1m1x = str2func (M1);
    elseif (ismatrix (M1))
      M1m1x = @(x) M1  \ x;
    elseif (isa (M1, "function_handle"))
      M1m1x = @(x) feval (M1, x);
    else
      error (["bicgstab: preconditioner is " ...
              "expected to be a function or matrix"]);
    endif

    if (nargin < 6 || isempty (M2))
      M2m1x = @(x) x;
    elseif (ischar (M2))
      M2m1x = str2func (M2);
    elseif (ismatrix (M2))
      M2m1x = @(x) M2  \ x;
    elseif (isa (M2, "function_handle"))
      M2m1x = @(x) feval (M2, x);
    else
      error (["bicgstab: preconditioner is "...
              "expected to be a function or matrix"]);
    endif

    precon = @(x) M2m1x (M1m1x (x));

    if (nargin < 7 || isempty (x0))
      x0 = zeros (size (b));
    endif

    ## specifies initial estimate x0
    if (nargin < 7)
      x = zeros (rows (b), 1);
    else
      x = x0;
    endif

    norm_b = norm (b);

    res = b - Ax (x);
    rr = res;

    ## Vector of the residual norms for each iteration.
    resvec = norm(res) / norm_b;

    ## Default behaviour we don't reach tolerance tol within maxit iterations.
    flag = 1;

    for iter = 1:maxit
      rho_1 = res' * rr;

      if (iter == 1)
        p = res;
      else
        beta = (rho_1 / rho_2) * (alpha / omega);
        p = res + beta * (p - omega * v);
      endif

      phat = precon (p);

      v = Ax (phat);
      alpha = rho_1 / (rr' * v);
      s = res - alpha * v;

      shat = precon (s);

      t = Ax (shat);
      omega = (t' * s) / (t' * t);
      x = x + alpha * phat + omega * shat;
      res = s - omega * t;
      rho_2 = rho_1;

      relres = norm (res) / norm_b;
      resvec = [resvec; relres];

      if (relres <= tol)
        ## We reach tolerance tol within maxit iterations.
        flag = 0;
        break;
      elseif (resvec(end) == resvec(end - 1))
        ## The method stagnates.
        flag = 3;
        break;
      endif
    endfor

    if (nargout < 2)
      if (flag == 0)
        printf ("bicgstab converged at iteration %i ", iter);
        printf ("to a solution with relative residual %e\n", relres);
      elseif (flag == 3)
        printf ("bicgstab stopped at iteration %i ", iter);
        printf ("without converging to the desired tolerance %e\n", tol);
        printf ("because the method stagnated.\n");
        printf ("The iterate returned (number %i) ", iter);
        printf ("has relative residual %e\n", relres);
      else
        printf ("bicgstab stopped at iteration %i ", iter);
        printf ("without converging to the desired toleranc %e\n", tol);
        printf ("because the maximum number of iterations was reached.\n");
        printf ("The iterate returned (number %i) ", iter);
        printf ("has relative residual %e\n", relres);
      endif
    endif

  else
    print_usage ();
  endif

endfunction

%!demo
%! % Solve system of A*x=b
%! A = [5 -1 3;-1 2 -2;3 -2 3]
%! b = [7;-1;4]
%! [x, flag, relres, iter, resvec] = bicgstab(A, b)

%!shared A, b, n, M1, M2
%!
%!test
%! n = 100;
%! A = spdiags ([-2*ones(n,1) 4*ones(n,1) -ones(n,1)], -1:1, n, n);
%! b = sum (A, 2);
%! tol = 1e-8;
%! maxit = 15;
%! M1 = spdiags ([ones(n,1)/(-2) ones(n,1)],-1:0, n, n);
%! M2 = spdiags ([4*ones(n,1) -ones(n,1)], 0:1, n, n);
%! [x, flag, relres, iter, resvec] = bicgstab (A, b, tol, maxit, M1, M2);
%! assert (x, ones (size (b)), 1e-7);
%!
%!test
%! tol = 1e-8;
%! maxit = 15;
%!
%! function y = afun (x, a)
%!     y = a * x;
%! endfunction
%!
%! [x, flag, relres, iter, resvec] = bicgstab (@(x) afun (x, A), b,
%!                                             tol, maxit, M1, M2);
%! assert (x, ones (size (b)), 1e-7);

%!test
%! n = 100;
%! tol = 1e-8;
%! a = sprand (n, n, .1);
%! A = a'*a + 100 * eye (n);
%! b = sum (A, 2);
%! [x, flag, relres, iter, resvec] = bicgstab (A, b, tol, [], diag (diag (A)));
%! assert (x, ones (size (b)), 1e-7);