Mercurial > octave-dspies
annotate libinterp/octave-value/ov-bool-sparse.cc @ 18678:6113e0c6920b
maint: Clean up extra spaces before/after parentheses.
| author | Rik <rik@octave.org> |
|---|---|
| date | Fri, 25 Apr 2014 13:25:25 -0700 |
| parents | 6a71e5030df5 |
| children | 3bffa847d215 |
| rev | line source |
|---|---|
| 5164 | 1 /* |
| 2 | |
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3 Copyright (C) 2004-2013 David Bateman |
| 11523 | 4 Copyright (C) 1998-2004 Andy Adler |
| 7016 | 5 |
| 6 This file is part of Octave. | |
| 5164 | 7 |
| 8 Octave is free software; you can redistribute it and/or modify it | |
| 9 under the terms of the GNU General Public License as published by the | |
| 7016 | 10 Free Software Foundation; either version 3 of the License, or (at your |
| 11 option) any later version. | |
| 5164 | 12 |
| 13 Octave is distributed in the hope that it will be useful, but WITHOUT | |
| 14 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or | |
| 15 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License | |
| 16 for more details. | |
| 17 | |
| 18 You should have received a copy of the GNU General Public License | |
| 7016 | 19 along with Octave; see the file COPYING. If not, see |
| 20 <http://www.gnu.org/licenses/>. | |
| 5164 | 21 |
| 22 */ | |
| 23 | |
| 24 #ifdef HAVE_CONFIG_H | |
| 25 #include <config.h> | |
| 26 #endif | |
| 27 | |
| 28 #include <iostream> | |
|
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29 #include <limits> |
| 5164 | 30 #include <vector> |
| 31 | |
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32 #include "dim-vector.h" |
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33 |
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34 #include "mxarray.h" |
| 5164 | 35 #include "ov-base.h" |
| 36 #include "ov-scalar.h" | |
| 37 #include "ov-bool.h" | |
| 38 #include "ov-bool-mat.h" | |
| 39 #include "gripes.h" | |
| 40 #include "ops.h" | |
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41 #include "oct-locbuf.h" |
| 5164 | 42 |
| 43 #include "ov-re-sparse.h" | |
| 44 #include "ov-cx-sparse.h" | |
| 45 #include "ov-bool-sparse.h" | |
| 46 | |
| 47 #include "ov-base-sparse.h" | |
| 48 #include "ov-base-sparse.cc" | |
| 49 | |
| 6109 | 50 template class OCTINTERP_API octave_base_sparse<SparseBoolMatrix>; |
| 5164 | 51 |
| 52 DEFINE_OCTAVE_ALLOCATOR (octave_sparse_bool_matrix); | |
| 53 | |
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54 DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA (octave_sparse_bool_matrix, |
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55 "sparse bool matrix", "logical"); |
| 5164 | 56 |
| 5759 | 57 static octave_base_value * |
| 58 default_numeric_conversion_function (const octave_base_value& a) | |
| 5164 | 59 { |
| 60 CAST_CONV_ARG (const octave_sparse_bool_matrix&); | |
| 61 | |
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62 return |
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63 new octave_sparse_matrix (SparseMatrix (v.sparse_bool_matrix_value ())); |
| 5164 | 64 } |
| 65 | |
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66 octave_base_value::type_conv_info |
| 5164 | 67 octave_sparse_bool_matrix::numeric_conversion_function (void) const |
| 68 { | |
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69 return octave_base_value::type_conv_info (default_numeric_conversion_function, |
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70 octave_sparse_matrix::static_type_id ()); |
| 5164 | 71 } |
| 72 | |
| 5759 | 73 octave_base_value * |
| 5164 | 74 octave_sparse_bool_matrix::try_narrowing_conversion (void) |
| 75 { | |
| 5759 | 76 octave_base_value *retval = 0; |
| 5164 | 77 |
| 7193 | 78 if (Vsparse_auto_mutate) |
| 5164 | 79 { |
| 7193 | 80 // Don't use numel, since it can overflow for very large matrices |
| 81 // Note that for the second test, this means it becomes approximative | |
| 82 // since it involves a cast to double to avoid issues of overflow | |
| 83 if (matrix.rows () == 1 && matrix.cols () == 1) | |
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84 { |
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85 // Const copy of the matrix, so the right version of () operator used |
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86 const SparseBoolMatrix tmp (matrix); |
| 5164 | 87 |
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88 retval = new octave_bool (tmp (0)); |
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89 } |
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90 else if (matrix.cols () > 0 && matrix.rows () > 0 |
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91 && (double (matrix.byte_size ()) > double (matrix.rows ()) |
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92 * double (matrix.cols ()) * sizeof (bool))) |
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93 retval = new octave_bool_matrix (matrix.matrix_value ()); |
| 5164 | 94 } |
| 95 | |
| 96 return retval; | |
| 97 } | |
| 98 | |
| 99 double | |
| 100 octave_sparse_bool_matrix::double_value (bool) const | |
| 101 { | |
| 102 double retval = lo_ieee_nan_value (); | |
| 103 | |
| 104 if (numel () > 0) | |
| 105 { | |
| 6221 | 106 if (numel () > 1) |
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107 gripe_implicit_conversion ("Octave:array-to-scalar", |
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108 "bool sparse matrix", "real scalar"); |
| 5164 | 109 |
| 110 retval = matrix (0, 0); | |
| 111 } | |
| 112 else | |
| 113 gripe_invalid_conversion ("bool sparse matrix", "real scalar"); | |
| 114 | |
| 115 return retval; | |
| 116 } | |
| 117 | |
| 118 Complex | |
| 119 octave_sparse_bool_matrix::complex_value (bool) const | |
| 120 { | |
| 121 double tmp = lo_ieee_nan_value (); | |
| 122 | |
| 123 Complex retval (tmp, tmp); | |
| 124 | |
| 125 if (rows () > 0 && columns () > 0) | |
| 126 { | |
| 6221 | 127 if (numel () > 1) |
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128 gripe_implicit_conversion ("Octave:array-to-scalar", |
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129 "bool sparse matrix", "complex scalar"); |
| 5164 | 130 |
| 131 retval = matrix (0, 0); | |
| 132 } | |
| 133 else | |
| 134 gripe_invalid_conversion ("bool sparse matrix", "complex scalar"); | |
| 135 | |
| 136 return retval; | |
| 137 } | |
| 138 | |
| 139 octave_value | |
| 5279 | 140 octave_sparse_bool_matrix::convert_to_str_internal (bool pad, bool force, |
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141 char type) const |
| 5164 | 142 { |
| 143 octave_value tmp = octave_value (array_value ()); | |
| 5279 | 144 return tmp.convert_to_str (pad, force, type); |
| 5164 | 145 } |
| 146 | |
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147 // FIXME: These are inefficient ways of creating full matrices |
| 5164 | 148 |
| 149 Matrix | |
| 150 octave_sparse_bool_matrix::matrix_value (bool) const | |
| 151 { | |
| 152 return Matrix (matrix.matrix_value ()); | |
| 153 } | |
| 154 | |
| 155 ComplexMatrix | |
| 156 octave_sparse_bool_matrix::complex_matrix_value (bool) const | |
| 157 { | |
| 158 return ComplexMatrix (matrix.matrix_value ()); | |
| 159 } | |
| 160 | |
| 161 ComplexNDArray | |
| 162 octave_sparse_bool_matrix::complex_array_value (bool) const | |
| 163 { | |
| 164 return ComplexNDArray (ComplexMatrix (matrix.matrix_value ())); | |
| 165 } | |
| 166 | |
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167 NDArray |
| 5164 | 168 octave_sparse_bool_matrix::array_value (bool) const |
| 169 { | |
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170 return NDArray (Matrix (matrix.matrix_value ())); |
| 5164 | 171 } |
| 172 | |
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173 charNDArray |
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174 octave_sparse_bool_matrix::char_array_value (bool) const |
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175 { |
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176 charNDArray retval (dims (), 0); |
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177 octave_idx_type nc = matrix.cols (); |
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178 octave_idx_type nr = matrix.rows (); |
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179 |
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180 for (octave_idx_type j = 0; j < nc; j++) |
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181 for (octave_idx_type i = matrix.cidx (j); i < matrix.cidx (j+1); i++) |
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182 retval(matrix.ridx (i) + nr * j) = static_cast<char>(matrix.data (i)); |
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183 |
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184 return retval; |
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185 } |
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186 |
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187 boolMatrix |
| 5944 | 188 octave_sparse_bool_matrix::bool_matrix_value (bool) const |
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189 { |
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190 return matrix.matrix_value (); |
| 5164 | 191 } |
| 192 | |
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193 boolNDArray |
| 5944 | 194 octave_sparse_bool_matrix::bool_array_value (bool) const |
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195 { |
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196 return boolNDArray (matrix.matrix_value ()); |
| 5164 | 197 } |
| 198 | |
| 199 | |
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200 SparseMatrix |
| 5188 | 201 octave_sparse_bool_matrix::sparse_matrix_value (bool) const |
| 5164 | 202 { |
| 203 return SparseMatrix (this->matrix); | |
| 204 } | |
| 205 | |
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206 SparseComplexMatrix |
| 5188 | 207 octave_sparse_bool_matrix::sparse_complex_matrix_value (bool) const |
| 5164 | 208 { |
| 209 return SparseComplexMatrix (this->matrix); | |
| 210 } | |
| 211 | |
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212 bool |
| 5164 | 213 octave_sparse_bool_matrix::save_binary (std::ostream& os, bool&) |
| 214 { | |
| 215 dim_vector d = this->dims (); | |
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216 if (d.length () < 1) |
| 5164 | 217 return false; |
| 218 | |
| 219 // Ensure that additional memory is deallocated | |
| 220 matrix.maybe_compress (); | |
| 221 | |
| 222 int nr = d(0); | |
| 223 int nc = d(1); | |
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224 int nz = nnz (); |
| 5164 | 225 |
| 5828 | 226 int32_t itmp; |
| 5164 | 227 // Use negative value for ndims to be consistent with other formats |
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228 itmp= -2; |
| 5760 | 229 os.write (reinterpret_cast<char *> (&itmp), 4); |
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230 |
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231 itmp= nr; |
| 5760 | 232 os.write (reinterpret_cast<char *> (&itmp), 4); |
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233 |
| 5164 | 234 itmp= nc; |
| 5760 | 235 os.write (reinterpret_cast<char *> (&itmp), 4); |
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236 |
| 5164 | 237 itmp= nz; |
| 5760 | 238 os.write (reinterpret_cast<char *> (&itmp), 4); |
| 5164 | 239 |
| 240 // add one to the printed indices to go from | |
| 241 // zero-based to one-based arrays | |
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242 for (int i = 0; i < nc+1; i++) |
| 5164 | 243 { |
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244 octave_quit (); |
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245 itmp = matrix.cidx (i); |
| 5760 | 246 os.write (reinterpret_cast<char *> (&itmp), 4); |
| 5164 | 247 } |
| 248 | |
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249 for (int i = 0; i < nz; i++) |
| 5164 | 250 { |
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251 octave_quit (); |
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252 itmp = matrix.ridx (i); |
| 5760 | 253 os.write (reinterpret_cast<char *> (&itmp), 4); |
| 5164 | 254 } |
| 255 | |
| 256 OCTAVE_LOCAL_BUFFER (char, htmp, nz); | |
| 257 | |
| 258 for (int i = 0; i < nz; i++) | |
| 259 htmp[i] = (matrix.data (i) ? 1 : 0); | |
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260 |
| 5164 | 261 os.write (htmp, nz); |
| 262 | |
| 263 return true; | |
| 264 } | |
| 265 | |
| 266 bool | |
| 267 octave_sparse_bool_matrix::load_binary (std::istream& is, bool swap, | |
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268 oct_mach_info::float_format /* fmt */) |
| 5164 | 269 { |
| 5828 | 270 int32_t nz, nc, nr, tmp; |
| 5760 | 271 if (! is.read (reinterpret_cast<char *> (&tmp), 4)) |
| 5164 | 272 return false; |
| 273 | |
| 274 if (swap) | |
| 275 swap_bytes<4> (&tmp); | |
| 276 | |
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277 if (tmp != -2) |
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278 { |
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279 error ("load: only 2-D sparse matrices are supported"); |
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280 return false; |
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281 } |
| 5164 | 282 |
| 5760 | 283 if (! is.read (reinterpret_cast<char *> (&nr), 4)) |
| 5164 | 284 return false; |
| 5760 | 285 if (! is.read (reinterpret_cast<char *> (&nc), 4)) |
| 5164 | 286 return false; |
| 5760 | 287 if (! is.read (reinterpret_cast<char *> (&nz), 4)) |
| 5164 | 288 return false; |
| 289 | |
| 290 if (swap) | |
| 291 { | |
| 292 swap_bytes<4> (&nr); | |
| 293 swap_bytes<4> (&nc); | |
| 294 swap_bytes<4> (&nz); | |
| 295 } | |
| 296 | |
| 5275 | 297 SparseBoolMatrix m (static_cast<octave_idx_type> (nr), |
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298 static_cast<octave_idx_type> (nc), |
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299 static_cast<octave_idx_type> (nz)); |
| 5164 | 300 |
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301 for (int i = 0; i < nc+1; i++) |
| 5164 | 302 { |
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303 octave_quit (); |
| 5760 | 304 if (! is.read (reinterpret_cast<char *> (&tmp), 4)) |
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305 return false; |
| 5164 | 306 if (swap) |
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307 swap_bytes<4> (&tmp); |
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308 m.cidx (i) = tmp; |
| 5164 | 309 } |
| 310 | |
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311 for (int i = 0; i < nz; i++) |
| 5164 | 312 { |
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313 octave_quit (); |
| 5760 | 314 if (! is.read (reinterpret_cast<char *> (&tmp), 4)) |
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315 return false; |
| 5164 | 316 if (swap) |
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317 swap_bytes<4> (&tmp); |
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318 m.ridx (i) = tmp; |
| 5164 | 319 } |
| 320 | |
| 321 if (error_state || ! is) | |
| 322 return false; | |
| 323 | |
| 324 OCTAVE_LOCAL_BUFFER (char, htmp, nz); | |
| 325 | |
| 326 if (! is.read (htmp, nz)) | |
| 327 return false; | |
| 328 | |
| 329 for (int i = 0; i < nz; i++) | |
| 330 m.data(i) = (htmp[i] ? 1 : 0); | |
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331 |
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332 if (! m.indices_ok ()) |
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333 return false; |
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334 |
| 5164 | 335 matrix = m; |
| 336 | |
| 337 return true; | |
| 338 } | |
| 339 | |
| 340 #if defined (HAVE_HDF5) | |
| 5900 | 341 |
| 5164 | 342 bool |
| 343 octave_sparse_bool_matrix::save_hdf5 (hid_t loc_id, const char *name, bool) | |
| 344 { | |
| 345 dim_vector dv = dims (); | |
| 346 int empty = save_hdf5_empty (loc_id, name, dv); | |
| 347 if (empty) | |
| 348 return (empty > 0); | |
| 349 | |
| 350 // Ensure that additional memory is deallocated | |
| 351 matrix.maybe_compress (); | |
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352 #if HAVE_HDF5_18 |
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353 hid_t group_hid = H5Gcreate (loc_id, name, H5P_DEFAULT, H5P_DEFAULT, |
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354 H5P_DEFAULT); |
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355 #else |
| 5164 | 356 hid_t group_hid = H5Gcreate (loc_id, name, 0); |
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357 #endif |
| 5164 | 358 if (group_hid < 0) |
| 359 return false; | |
| 360 | |
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361 hid_t space_hid, data_hid; |
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362 space_hid = data_hid = -1; |
| 5164 | 363 bool retval = true; |
| 364 SparseBoolMatrix m = sparse_bool_matrix_value (); | |
| 5351 | 365 octave_idx_type tmp; |
| 5164 | 366 hsize_t hdims[2]; |
| 367 | |
| 5760 | 368 space_hid = H5Screate_simple (0, hdims, 0); |
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369 if (space_hid < 0) |
| 5164 | 370 { |
| 371 H5Gclose (group_hid); | |
| 372 return false; | |
| 373 } | |
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374 #if HAVE_HDF5_18 |
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375 data_hid = H5Dcreate (group_hid, "nr", H5T_NATIVE_IDX, space_hid, |
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376 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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377 #else |
| 5760 | 378 data_hid = H5Dcreate (group_hid, "nr", H5T_NATIVE_IDX, space_hid, |
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379 H5P_DEFAULT); |
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380 #endif |
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381 if (data_hid < 0) |
| 5164 | 382 { |
| 383 H5Sclose (space_hid); | |
| 384 H5Gclose (group_hid); | |
| 385 return false; | |
| 386 } | |
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387 |
| 5164 | 388 tmp = m.rows (); |
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389 retval = H5Dwrite (data_hid, H5T_NATIVE_IDX, H5S_ALL, |
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390 H5S_ALL, H5P_DEFAULT, &tmp) >= 0; |
| 5164 | 391 H5Dclose (data_hid); |
| 392 if (!retval) | |
| 393 { | |
| 394 H5Sclose (space_hid); | |
| 395 H5Gclose (group_hid); | |
| 396 return false; | |
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397 } |
| 5164 | 398 |
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399 #if HAVE_HDF5_18 |
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400 data_hid = H5Dcreate (group_hid, "nc", H5T_NATIVE_IDX, space_hid, |
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401 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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402 #else |
| 5760 | 403 data_hid = H5Dcreate (group_hid, "nc", H5T_NATIVE_IDX, space_hid, |
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404 H5P_DEFAULT); |
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405 #endif |
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406 if (data_hid < 0) |
| 5164 | 407 { |
| 408 H5Sclose (space_hid); | |
| 409 H5Gclose (group_hid); | |
| 410 return false; | |
| 411 } | |
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412 |
| 5164 | 413 tmp = m.cols (); |
| 5351 | 414 retval = H5Dwrite (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
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415 H5P_DEFAULT, &tmp) >= 0; |
| 5164 | 416 H5Dclose (data_hid); |
| 417 if (!retval) | |
| 418 { | |
| 419 H5Sclose (space_hid); | |
| 420 H5Gclose (group_hid); | |
| 421 return false; | |
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422 } |
| 5164 | 423 |
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424 #if HAVE_HDF5_18 |
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425 data_hid = H5Dcreate (group_hid, "nz", H5T_NATIVE_IDX, space_hid, |
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426 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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427 #else |
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428 data_hid = H5Dcreate (group_hid, "nz", H5T_NATIVE_IDX, space_hid, |
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429 H5P_DEFAULT); |
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430 #endif |
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431 if (data_hid < 0) |
| 5164 | 432 { |
| 433 H5Sclose (space_hid); | |
| 434 H5Gclose (group_hid); | |
| 435 return false; | |
| 436 } | |
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437 |
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438 tmp = m.nnz (); |
| 5351 | 439 retval = H5Dwrite (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
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440 H5P_DEFAULT, &tmp) >= 0; |
| 5164 | 441 H5Dclose (data_hid); |
| 442 if (!retval) | |
| 443 { | |
| 444 H5Sclose (space_hid); | |
| 445 H5Gclose (group_hid); | |
| 446 return false; | |
| 447 } | |
| 448 | |
| 449 H5Sclose (space_hid); | |
| 450 | |
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451 hdims[0] = m.cols () + 1; |
| 5164 | 452 hdims[1] = 1; |
| 453 | |
| 454 space_hid = H5Screate_simple (2, hdims, 0); | |
| 455 | |
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456 if (space_hid < 0) |
| 5164 | 457 { |
| 458 H5Gclose (group_hid); | |
| 459 return false; | |
| 460 } | |
| 461 | |
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462 #if HAVE_HDF5_18 |
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463 data_hid = H5Dcreate (group_hid, "cidx", H5T_NATIVE_IDX, space_hid, |
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464 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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465 #else |
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466 data_hid = H5Dcreate (group_hid, "cidx", H5T_NATIVE_IDX, space_hid, |
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467 H5P_DEFAULT); |
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468 #endif |
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469 if (data_hid < 0) |
| 5164 | 470 { |
| 471 H5Sclose (space_hid); | |
| 472 H5Gclose (group_hid); | |
| 473 return false; | |
| 474 } | |
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475 |
| 5351 | 476 octave_idx_type * itmp = m.xcidx (); |
| 477 retval = H5Dwrite (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, | |
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478 H5P_DEFAULT, itmp) >= 0; |
| 5164 | 479 H5Dclose (data_hid); |
| 480 if (!retval) | |
| 481 { | |
| 482 H5Sclose (space_hid); | |
| 483 H5Gclose (group_hid); | |
| 484 return false; | |
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485 } |
| 5164 | 486 |
| 487 H5Sclose (space_hid); | |
| 488 | |
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489 hdims[0] = m.nnz (); |
| 5164 | 490 hdims[1] = 1; |
| 491 | |
| 492 space_hid = H5Screate_simple (2, hdims, 0); | |
| 493 | |
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494 if (space_hid < 0) |
| 5164 | 495 { |
| 496 H5Gclose (group_hid); | |
| 497 return false; | |
| 498 } | |
| 499 | |
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500 #if HAVE_HDF5_18 |
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501 data_hid = H5Dcreate (group_hid, "ridx", H5T_NATIVE_IDX, space_hid, |
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502 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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503 #else |
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504 data_hid = H5Dcreate (group_hid, "ridx", H5T_NATIVE_IDX, space_hid, |
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505 H5P_DEFAULT); |
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506 #endif |
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507 if (data_hid < 0) |
| 5164 | 508 { |
| 509 H5Sclose (space_hid); | |
| 510 H5Gclose (group_hid); | |
| 511 return false; | |
| 512 } | |
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513 |
| 5164 | 514 itmp = m.xridx (); |
| 5351 | 515 retval = H5Dwrite (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
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516 H5P_DEFAULT, itmp) >= 0; |
| 5164 | 517 H5Dclose (data_hid); |
| 518 if (!retval) | |
| 519 { | |
| 520 H5Sclose (space_hid); | |
| 521 H5Gclose (group_hid); | |
| 522 return false; | |
| 523 } | |
| 524 | |
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525 #if HAVE_HDF5_18 |
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526 data_hid = H5Dcreate (group_hid, "data", H5T_NATIVE_HBOOL, space_hid, |
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527 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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528 #else |
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529 data_hid = H5Dcreate (group_hid, "data", H5T_NATIVE_HBOOL, space_hid, |
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530 H5P_DEFAULT); |
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531 #endif |
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532 if (data_hid < 0) |
| 5164 | 533 { |
| 534 H5Sclose (space_hid); | |
| 535 H5Gclose (group_hid); | |
| 536 return false; | |
| 537 } | |
| 6276 | 538 |
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539 OCTAVE_LOCAL_BUFFER (hbool_t, htmp, m.nnz ()); |
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540 for (int i = 0; i < m.nnz (); i++) |
| 5164 | 541 htmp[i] = m.xdata(i); |
| 542 | |
| 543 retval = H5Dwrite (data_hid, H5T_NATIVE_HBOOL, H5S_ALL, H5S_ALL, | |
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544 H5P_DEFAULT, htmp) >= 0; |
| 5164 | 545 H5Dclose (data_hid); |
| 546 H5Sclose (space_hid); | |
| 547 H5Gclose (group_hid); | |
| 548 | |
| 549 return retval; | |
| 550 } | |
| 551 | |
| 552 bool | |
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553 octave_sparse_bool_matrix::load_hdf5 (hid_t loc_id, const char *name) |
| 5164 | 554 { |
| 5351 | 555 octave_idx_type nr, nc, nz; |
| 5164 | 556 hid_t group_hid, data_hid, space_hid; |
| 557 hsize_t rank; | |
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558 |
| 5164 | 559 dim_vector dv; |
| 560 int empty = load_hdf5_empty (loc_id, name, dv); | |
| 561 if (empty > 0) | |
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562 matrix.resize (dv); |
| 5164 | 563 if (empty) |
| 564 return (empty > 0); | |
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565 |
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566 #if HAVE_HDF5_18 |
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567 group_hid = H5Gopen (loc_id, name, H5P_DEFAULT); |
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568 #else |
| 5164 | 569 group_hid = H5Gopen (loc_id, name); |
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570 #endif |
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571 if (group_hid < 0) return false; |
| 5164 | 572 |
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573 #if HAVE_HDF5_18 |
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574 data_hid = H5Dopen (group_hid, "nr", H5P_DEFAULT); |
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575 #else |
| 5164 | 576 data_hid = H5Dopen (group_hid, "nr"); |
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577 #endif |
| 5164 | 578 space_hid = H5Dget_space (data_hid); |
| 579 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 580 | |
| 581 if (rank != 0) | |
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582 { |
| 5164 | 583 H5Dclose (data_hid); |
| 584 H5Gclose (group_hid); | |
| 585 return false; | |
| 586 } | |
| 587 | |
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588 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, H5P_DEFAULT, &nr) |
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589 < 0) |
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590 { |
| 5164 | 591 H5Dclose (data_hid); |
| 592 H5Gclose (group_hid); | |
| 593 return false; | |
| 594 } | |
| 595 | |
| 596 H5Dclose (data_hid); | |
| 597 | |
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598 #if HAVE_HDF5_18 |
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599 data_hid = H5Dopen (group_hid, "nc", H5P_DEFAULT); |
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600 #else |
| 5164 | 601 data_hid = H5Dopen (group_hid, "nc"); |
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602 #endif |
| 5164 | 603 space_hid = H5Dget_space (data_hid); |
| 604 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 605 | |
| 606 if (rank != 0) | |
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607 { |
| 5164 | 608 H5Dclose (data_hid); |
| 609 H5Gclose (group_hid); | |
| 610 return false; | |
| 611 } | |
| 612 | |
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613 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, H5P_DEFAULT, &nc) |
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614 < 0) |
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615 { |
| 5164 | 616 H5Dclose (data_hid); |
| 617 H5Gclose (group_hid); | |
| 618 return false; | |
| 619 } | |
| 620 | |
| 621 H5Dclose (data_hid); | |
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622 |
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623 #if HAVE_HDF5_18 |
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624 data_hid = H5Dopen (group_hid, "nz", H5P_DEFAULT); |
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625 #else |
| 5164 | 626 data_hid = H5Dopen (group_hid, "nz"); |
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627 #endif |
| 5164 | 628 space_hid = H5Dget_space (data_hid); |
| 629 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 630 | |
| 631 if (rank != 0) | |
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632 { |
| 5164 | 633 H5Dclose (data_hid); |
| 634 H5Gclose (group_hid); | |
| 635 return false; | |
| 636 } | |
| 637 | |
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638 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, H5P_DEFAULT, &nz) |
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639 < 0) |
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640 { |
| 5164 | 641 H5Dclose (data_hid); |
| 642 H5Gclose (group_hid); | |
| 643 return false; | |
| 644 } | |
| 645 | |
| 646 H5Dclose (data_hid); | |
| 647 | |
| 5275 | 648 SparseBoolMatrix m (static_cast<octave_idx_type> (nr), |
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649 static_cast<octave_idx_type> (nc), |
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650 static_cast<octave_idx_type> (nz)); |
| 5164 | 651 |
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652 #if HAVE_HDF5_18 |
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653 data_hid = H5Dopen (group_hid, "cidx", H5P_DEFAULT); |
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654 #else |
| 5164 | 655 data_hid = H5Dopen (group_hid, "cidx"); |
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656 #endif |
| 5164 | 657 space_hid = H5Dget_space (data_hid); |
| 658 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 659 | |
| 660 if (rank != 2) | |
| 661 { | |
| 662 H5Sclose (space_hid); | |
| 663 H5Dclose (data_hid); | |
| 664 H5Gclose (group_hid); | |
| 665 return false; | |
| 666 } | |
| 667 | |
| 668 OCTAVE_LOCAL_BUFFER (hsize_t, hdims, rank); | |
| 669 OCTAVE_LOCAL_BUFFER (hsize_t, maxdims, rank); | |
| 670 | |
| 671 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); | |
| 672 | |
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673 if (static_cast<int> (hdims[0]) != nc + 1 |
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674 || static_cast<int> (hdims[1]) != 1) |
| 5164 | 675 { |
| 676 H5Sclose (space_hid); | |
| 677 H5Dclose (data_hid); | |
| 678 H5Gclose (group_hid); | |
| 679 return false; | |
| 680 } | |
| 681 | |
| 5351 | 682 octave_idx_type *itmp = m.xcidx (); |
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683 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, H5P_DEFAULT, itmp) |
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684 < 0) |
| 5164 | 685 { |
| 686 H5Sclose (space_hid); | |
| 687 H5Dclose (data_hid); | |
| 688 H5Gclose (group_hid); | |
| 689 return false; | |
| 690 } | |
| 691 | |
| 692 H5Sclose (space_hid); | |
| 693 H5Dclose (data_hid); | |
| 694 | |
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695 #if HAVE_HDF5_18 |
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696 data_hid = H5Dopen (group_hid, "ridx", H5P_DEFAULT); |
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697 #else |
| 5164 | 698 data_hid = H5Dopen (group_hid, "ridx"); |
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699 #endif |
| 5164 | 700 space_hid = H5Dget_space (data_hid); |
| 701 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 702 | |
| 703 if (rank != 2) | |
| 704 { | |
| 705 H5Sclose (space_hid); | |
| 706 H5Dclose (data_hid); | |
| 707 H5Gclose (group_hid); | |
| 708 return false; | |
| 709 } | |
| 710 | |
| 711 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); | |
| 712 | |
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713 if (static_cast<int> (hdims[0]) != nz |
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714 || static_cast<int> (hdims[1]) != 1) |
| 5164 | 715 { |
| 716 H5Sclose (space_hid); | |
| 717 H5Dclose (data_hid); | |
| 718 H5Gclose (group_hid); | |
| 719 return false; | |
| 720 } | |
| 721 | |
| 722 itmp = m.xridx (); | |
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723 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
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724 H5P_DEFAULT, itmp) < 0) |
| 5164 | 725 { |
| 726 H5Sclose (space_hid); | |
| 727 H5Dclose (data_hid); | |
| 728 H5Gclose (group_hid); | |
| 729 return false; | |
| 730 } | |
| 731 | |
| 732 H5Sclose (space_hid); | |
| 733 H5Dclose (data_hid); | |
| 734 | |
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735 #if HAVE_HDF5_18 |
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736 data_hid = H5Dopen (group_hid, "data", H5P_DEFAULT); |
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737 #else |
| 5164 | 738 data_hid = H5Dopen (group_hid, "data"); |
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9892
ac69e6f4b33d
Add HDF5-1.8 compatibility while maintaining compatibility with HDF5-1.6 versions
Kacper Kowalik <xarthisius.kk@gmail.com>
parents:
9881
diff
changeset
|
739 #endif |
| 5164 | 740 space_hid = H5Dget_space (data_hid); |
| 741 rank = H5Sget_simple_extent_ndims (space_hid); | |
| 742 | |
| 743 if (rank != 2) | |
| 744 { | |
| 745 H5Sclose (space_hid); | |
| 746 H5Dclose (data_hid); | |
| 747 H5Gclose (group_hid); | |
| 748 return false; | |
| 749 } | |
| 750 | |
| 751 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); | |
| 752 | |
|
9469
c6edba80dfae
sanity checks for loading sparse matrices
John W. Eaton <jwe@octave.org>
parents:
8920
diff
changeset
|
753 if (static_cast<int> (hdims[0]) != nz |
|
c6edba80dfae
sanity checks for loading sparse matrices
John W. Eaton <jwe@octave.org>
parents:
8920
diff
changeset
|
754 || static_cast<int> (hdims[1]) != 1) |
| 5164 | 755 { |
| 756 H5Sclose (space_hid); | |
| 757 H5Dclose (data_hid); | |
| 758 H5Gclose (group_hid); | |
| 759 return false; | |
| 760 } | |
| 761 | |
| 6775 | 762 OCTAVE_LOCAL_BUFFER (hbool_t, htmp, nz); |
| 5164 | 763 bool retval = false; |
|
9469
c6edba80dfae
sanity checks for loading sparse matrices
John W. Eaton <jwe@octave.org>
parents:
8920
diff
changeset
|
764 if (H5Dread (data_hid, H5T_NATIVE_HBOOL, H5S_ALL, H5S_ALL, |
|
10315
57a59eae83cc
untabify src C++ source files
John W. Eaton <jwe@octave.org>
parents:
10160
diff
changeset
|
765 H5P_DEFAULT, htmp) >= 0 |
|
9469
c6edba80dfae
sanity checks for loading sparse matrices
John W. Eaton <jwe@octave.org>
parents:
8920
diff
changeset
|
766 && m.indices_ok ()) |
| 5164 | 767 { |
| 768 retval = true; | |
| 769 | |
| 770 for (int i = 0; i < nz; i++) | |
|
10315
57a59eae83cc
untabify src C++ source files
John W. Eaton <jwe@octave.org>
parents:
10160
diff
changeset
|
771 m.xdata(i) = htmp[i]; |
| 5164 | 772 |
| 773 matrix = m; | |
| 774 } | |
| 775 | |
| 776 H5Sclose (space_hid); | |
| 777 H5Dclose (data_hid); | |
| 778 H5Gclose (group_hid); | |
| 779 | |
| 780 return retval; | |
| 781 } | |
| 5900 | 782 |
| 5164 | 783 #endif |
| 784 | |
| 5900 | 785 mxArray * |
| 786 octave_sparse_bool_matrix::as_mxArray (void) const | |
| 787 { | |
| 6686 | 788 mwSize nz = nzmax (); |
|
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11523
diff
changeset
|
789 mxArray *retval = new mxArray (mxLOGICAL_CLASS, rows (), columns (), |
|
10315
57a59eae83cc
untabify src C++ source files
John W. Eaton <jwe@octave.org>
parents:
10160
diff
changeset
|
790 nz, mxREAL); |
| 5903 | 791 bool *pr = static_cast<bool *> (retval->get_data ()); |
| 6686 | 792 mwIndex *ir = retval->get_ir (); |
| 793 mwIndex *jc = retval->get_jc (); | |
| 5903 | 794 |
| 6686 | 795 for (mwIndex i = 0; i < nz; i++) |
| 5903 | 796 { |
|
14861
f7afecdd87ef
maint: Use Octave coding conventions for cuddling parentheses in src/ directory
Rik <octave@nomad.inbox5.com>
parents:
14846
diff
changeset
|
797 pr[i] = matrix.data (i); |
|
f7afecdd87ef
maint: Use Octave coding conventions for cuddling parentheses in src/ directory
Rik <octave@nomad.inbox5.com>
parents:
14846
diff
changeset
|
798 ir[i] = matrix.ridx (i); |
| 5903 | 799 } |
| 800 | |
| 6686 | 801 for (mwIndex i = 0; i < columns () + 1; i++) |
|
14861
f7afecdd87ef
maint: Use Octave coding conventions for cuddling parentheses in src/ directory
Rik <octave@nomad.inbox5.com>
parents:
14846
diff
changeset
|
802 jc[i] = matrix.cidx (i); |
| 5903 | 803 |
| 804 return retval; | |
| 5900 | 805 } |