Mercurial > octave-nkf
annotate libinterp/octave-value/ov-str-mat.cc @ 17825:53f433bae63b
display (possibly truncated) values of strings in workspace view
* ov-str-mat.h, ov-str-mat.cc (octave_char_matrix_str::short_disp):
New function.
author | John W. Eaton <jwe@octave.org> |
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date | Fri, 01 Nov 2013 14:45:35 -0400 |
parents | 175b392e91fe |
children | 870f3e12e163 |
rev | line source |
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2376 | 1 /* |
2 | |
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3 Copyright (C) 1996-2013 John W. Eaton |
11523 | 4 Copyright (C) 2009-2010 VZLU Prague |
2376 | 5 |
6 This file is part of Octave. | |
7 | |
8 Octave is free software; you can redistribute it and/or modify it | |
9 under the terms of the GNU General Public License as published by the | |
7016 | 10 Free Software Foundation; either version 3 of the License, or (at your |
11 option) any later version. | |
2376 | 12 |
13 Octave is distributed in the hope that it will be useful, but WITHOUT | |
14 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or | |
15 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License | |
16 for more details. | |
17 | |
18 You should have received a copy of the GNU General Public License | |
7016 | 19 along with Octave; see the file COPYING. If not, see |
20 <http://www.gnu.org/licenses/>. | |
2376 | 21 |
22 */ | |
23 | |
24 #ifdef HAVE_CONFIG_H | |
25 #include <config.h> | |
26 #endif | |
27 | |
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28 #include <cctype> |
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29 |
3503 | 30 #include <iostream> |
4726 | 31 #include <vector> |
2901 | 32 |
4944 | 33 #include "data-conv.h" |
2376 | 34 #include "lo-ieee.h" |
4944 | 35 #include "mach-info.h" |
2376 | 36 #include "mx-base.h" |
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37 #include "oct-locbuf.h" |
2376 | 38 |
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39 #include "byte-swap.h" |
5758 | 40 #include "defun.h" |
41 #include "gripes.h" | |
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42 #include "ls-ascii-helper.h" |
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43 #include "ls-hdf5.h" |
5758 | 44 #include "ls-oct-ascii.h" |
45 #include "ls-utils.h" | |
2407 | 46 #include "oct-obj.h" |
4944 | 47 #include "oct-stream.h" |
2376 | 48 #include "ops.h" |
5033 | 49 #include "ov-scalar.h" |
2376 | 50 #include "ov-re-mat.h" |
51 #include "ov-str-mat.h" | |
52 #include "pr-output.h" | |
3836 | 53 #include "pt-mat.h" |
5758 | 54 #include "utils.h" |
4687 | 55 |
3219 | 56 DEFINE_OCTAVE_ALLOCATOR (octave_char_matrix_str); |
5279 | 57 DEFINE_OCTAVE_ALLOCATOR (octave_char_matrix_sq_str); |
2376 | 58 |
4612 | 59 DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA (octave_char_matrix_str, "string", "char"); |
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60 DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA (octave_char_matrix_sq_str, "sq_string", |
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61 "char"); |
2376 | 62 |
5759 | 63 static octave_base_value * |
64 default_numeric_conversion_function (const octave_base_value& a) | |
2376 | 65 { |
5759 | 66 octave_base_value *retval = 0; |
5033 | 67 |
2376 | 68 CAST_CONV_ARG (const octave_char_matrix_str&); |
69 | |
4668 | 70 NDArray nda = v.array_value (true); |
3203 | 71 |
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72 if (! error_state) |
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73 { |
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74 if (nda.numel () == 1) |
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75 retval = new octave_scalar (nda(0)); |
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76 else |
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77 retval = new octave_matrix (nda); |
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78 } |
5033 | 79 |
80 return retval; | |
2376 | 81 } |
82 | |
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83 octave_base_value::type_conv_info |
2376 | 84 octave_char_matrix_str::numeric_conversion_function (void) const |
85 { | |
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86 return octave_base_value::type_conv_info (default_numeric_conversion_function, |
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87 octave_matrix::static_type_id ()); |
2376 | 88 } |
89 | |
90 octave_value | |
5400 | 91 octave_char_matrix_str::do_index_op_internal (const octave_value_list& idx, |
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92 bool resize_ok, char type) |
2407 | 93 { |
94 octave_value retval; | |
95 | |
5275 | 96 octave_idx_type len = idx.length (); |
2407 | 97 |
98 switch (len) | |
99 { | |
5539 | 100 case 0: |
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101 retval = octave_value (matrix, type); |
2407 | 102 break; |
103 | |
104 case 1: | |
105 { | |
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106 idx_vector i = idx (0).index_vector (); |
2407 | 107 |
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108 if (! error_state) |
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109 retval = octave_value (charNDArray (matrix.index (i, resize_ok)), |
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110 type); |
2407 | 111 } |
112 break; | |
113 | |
5539 | 114 case 2: |
115 { | |
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116 idx_vector i = idx (0).index_vector (); |
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117 idx_vector j = idx (1).index_vector (); |
5539 | 118 |
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119 if (! error_state) |
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120 retval = octave_value (charNDArray (matrix.index (i, j, resize_ok)), |
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121 type); |
5539 | 122 } |
5435 | 123 break; |
124 | |
2407 | 125 default: |
4513 | 126 { |
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127 Array<idx_vector> idx_vec (dim_vector (len, 1)); |
4513 | 128 |
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129 for (octave_idx_type i = 0; i < len; i++) |
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130 idx_vec(i) = idx(i).index_vector (); |
4513 | 131 |
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132 if (! error_state) |
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133 retval = |
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134 octave_value (charNDArray (matrix.index (idx_vec, resize_ok)), |
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135 type); |
4513 | 136 } |
2407 | 137 break; |
138 } | |
139 | |
140 return retval; | |
141 } | |
142 | |
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143 octave_value |
5731 | 144 octave_char_matrix_str::resize (const dim_vector& dv, bool fill) const |
145 { | |
146 charNDArray retval (matrix); | |
147 if (fill) | |
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148 retval.resize (dv, 0); |
5731 | 149 else |
150 retval.resize (dv); | |
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151 return octave_value (retval, is_sq_string () ? '\'' : '"'); |
5731 | 152 } |
153 | |
4668 | 154 #define CHAR_MATRIX_CONV(T, INIT, TNAME, FCN) \ |
155 T retval INIT; \ | |
156 \ | |
157 if (! force_string_conv) \ | |
158 gripe_invalid_conversion ("string", TNAME); \ | |
159 else \ | |
160 { \ | |
5878 | 161 warning_with_id ("Octave:str-to-num", \ |
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162 "implicit conversion from %s to %s", \ |
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163 "string", TNAME); \ |
4668 | 164 \ |
165 retval = octave_char_matrix::FCN (); \ | |
166 } \ | |
167 \ | |
168 return retval | |
169 | |
4643 | 170 double |
171 octave_char_matrix_str::double_value (bool force_string_conv) const | |
172 { | |
4668 | 173 CHAR_MATRIX_CONV (double, = 0, "real scalar", double_value); |
174 } | |
4643 | 175 |
4668 | 176 Complex |
177 octave_char_matrix_str::complex_value (bool force_string_conv) const | |
178 { | |
179 CHAR_MATRIX_CONV (Complex, = 0, "complex scalar", complex_value); | |
4643 | 180 } |
181 | |
2376 | 182 Matrix |
183 octave_char_matrix_str::matrix_value (bool force_string_conv) const | |
184 { | |
4668 | 185 CHAR_MATRIX_CONV (Matrix, , "real matrix", matrix_value); |
186 } | |
187 | |
188 ComplexMatrix | |
189 octave_char_matrix_str::complex_matrix_value (bool force_string_conv) const | |
190 { | |
191 CHAR_MATRIX_CONV (ComplexMatrix, , "complex matrix", complex_matrix_value); | |
192 } | |
2376 | 193 |
4668 | 194 NDArray |
195 octave_char_matrix_str::array_value (bool force_string_conv) const | |
196 { | |
197 CHAR_MATRIX_CONV (NDArray, , "real N-d array", array_value); | |
198 } | |
2376 | 199 |
4668 | 200 ComplexNDArray |
201 octave_char_matrix_str::complex_array_value (bool force_string_conv) const | |
202 { | |
203 CHAR_MATRIX_CONV (ComplexNDArray, , "complex N-d array", | |
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204 complex_array_value); |
2376 | 205 } |
206 | |
2493 | 207 string_vector |
5715 | 208 octave_char_matrix_str::all_strings (bool) const |
2376 | 209 { |
4513 | 210 string_vector retval; |
211 | |
212 if (matrix.ndims () == 2) | |
213 { | |
6816 | 214 charMatrix chm = matrix.matrix_value (); |
4513 | 215 |
6816 | 216 octave_idx_type n = chm.rows (); |
2493 | 217 |
6816 | 218 retval.resize (n); |
2493 | 219 |
6816 | 220 for (octave_idx_type i = 0; i < n; i++) |
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221 retval[i] = chm.row_as_string (i); |
4513 | 222 } |
223 else | |
224 error ("invalid conversion of charNDArray to string_vector"); | |
2493 | 225 |
226 return retval; | |
2376 | 227 } |
228 | |
3536 | 229 std::string |
4457 | 230 octave_char_matrix_str::string_value (bool) const |
2376 | 231 { |
4513 | 232 std::string retval; |
233 | |
234 if (matrix.ndims () == 2) | |
235 { | |
236 charMatrix chm = matrix.matrix_value (); | |
237 | |
5775 | 238 retval = chm.row_as_string (0); // FIXME??? |
4513 | 239 } |
240 else | |
241 error ("invalid conversion of charNDArray to string"); | |
242 | |
243 return retval; | |
2376 | 244 } |
245 | |
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246 Array<std::string> |
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247 octave_char_matrix_str::cellstr_value (void) const |
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248 { |
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249 Array<std::string> retval; |
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250 |
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251 if (matrix.ndims () == 2) |
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252 { |
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253 const charMatrix chm = matrix.matrix_value (); |
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254 octave_idx_type nr = chm.rows (); |
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255 retval.clear (nr, 1); |
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256 for (octave_idx_type i = 0; i < nr; i++) |
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257 retval.xelem (i) = chm.row_as_string (i); |
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258 } |
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259 else |
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260 error ("cellstr: cannot convert multidimensional arrays"); |
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261 |
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262 return retval; |
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263 } |
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264 |
2376 | 265 void |
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266 octave_char_matrix_str::print_raw (std::ostream& os, |
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267 bool pr_as_read_syntax) const |
2376 | 268 { |
3219 | 269 octave_print_internal (os, matrix, pr_as_read_syntax, |
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270 current_print_indent_level (), true); |
2376 | 271 } |
272 | |
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273 std::string |
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274 octave_char_matrix_str::short_disp (void) const |
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275 { |
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276 std::string retval; |
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277 |
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278 if (matrix.ndims () == 2 && numel () > 0) |
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279 { |
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280 retval = string_value (); |
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281 |
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282 // FIXME -- should this be configurable? |
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283 |
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284 if (retval.length () > 100) |
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285 retval = retval.substr (0, 100); |
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286 } |
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287 |
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288 return retval; |
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289 } |
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290 |
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291 |
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292 bool |
6974 | 293 octave_char_matrix_str::save_ascii (std::ostream& os) |
4687 | 294 { |
4805 | 295 dim_vector d = dims (); |
296 if (d.length () > 2) | |
297 { | |
298 charNDArray tmp = char_array_value (); | |
299 os << "# ndims: " << d.length () << "\n"; | |
300 for (int i=0; i < d.length (); i++) | |
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301 os << " " << d (i); |
4805 | 302 os << "\n"; |
5760 | 303 os.write (tmp.fortran_vec (), d.numel ()); |
4805 | 304 os << "\n"; |
305 } | |
306 else | |
4687 | 307 { |
4805 | 308 // Keep this case, rather than use generic code above for |
309 // backward compatiability. Makes load_ascii much more complex!! | |
310 charMatrix chm = char_matrix_value (); | |
5275 | 311 octave_idx_type elements = chm.rows (); |
4805 | 312 os << "# elements: " << elements << "\n"; |
5275 | 313 for (octave_idx_type i = 0; i < elements; i++) |
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314 { |
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315 unsigned len = chm.cols (); |
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316 os << "# length: " << len << "\n"; |
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317 std::string tstr = chm.row_as_string (i); |
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318 const char *tmp = tstr.data (); |
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319 if (tstr.length () > len) |
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320 panic_impossible (); |
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321 os.write (tmp, len); |
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322 os << "\n"; |
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323 } |
4687 | 324 } |
325 | |
326 return true; | |
327 } | |
328 | |
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329 bool |
4687 | 330 octave_char_matrix_str::load_ascii (std::istream& is) |
331 { | |
332 bool success = true; | |
5099 | 333 |
334 string_vector keywords(3); | |
335 | |
336 keywords[0] = "ndims"; | |
337 keywords[1] = "elements"; | |
338 keywords[2] = "length"; | |
339 | |
340 std::string kw; | |
341 int val = 0; | |
4687 | 342 |
5099 | 343 if (extract_keyword (is, keywords, kw, val, true)) |
4687 | 344 { |
5099 | 345 if (kw == "ndims") |
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346 { |
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347 int mdims = val; |
5099 | 348 |
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349 if (mdims >= 0) |
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350 { |
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351 dim_vector dv; |
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352 dv.resize (mdims); |
4805 | 353 |
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354 for (int i = 0; i < mdims; i++) |
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355 is >> dv(i); |
4687 | 356 |
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357 if (is) |
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358 { |
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359 charNDArray tmp(dv); |
6717 | 360 |
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361 if (tmp.is_empty ()) |
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362 matrix = tmp; |
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363 else |
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364 { |
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365 char *ftmp = tmp.fortran_vec (); |
5099 | 366 |
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367 skip_preceeding_newline (is); |
4805 | 368 |
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369 if (! is.read (ftmp, dv.numel ()) || !is) |
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370 { |
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371 error ("load: failed to load string constant"); |
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372 success = false; |
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373 } |
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374 else |
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375 matrix = tmp; |
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376 } |
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377 } |
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378 else |
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379 { |
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380 error ("load: failed to read dimensions"); |
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381 success = false; |
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382 } |
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383 } |
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384 else |
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385 { |
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386 error ("load: failed to extract matrix size"); |
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387 success = false; |
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388 } |
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389 } |
5099 | 390 else if (kw == "elements") |
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391 { |
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392 int elements = val; |
4805 | 393 |
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394 if (elements >= 0) |
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395 { |
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396 // FIXME: need to be able to get max length before doing anything. |
4687 | 397 |
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398 charMatrix chm (elements, 0); |
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399 int max_len = 0; |
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400 for (int i = 0; i < elements; i++) |
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401 { |
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402 int len; |
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403 if (extract_keyword (is, "length", len) && len >= 0) |
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404 { |
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405 // Use this instead of a C-style character |
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406 // buffer so that we can properly handle |
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407 // embedded NUL characters. |
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408 charMatrix tmp (1, len); |
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409 char *ptmp = tmp.fortran_vec (); |
6151 | 410 |
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411 if (len > 0 && ! is.read (ptmp, len)) |
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412 { |
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413 error ("load: failed to load string constant"); |
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414 success = false; |
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415 break; |
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416 } |
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417 else |
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418 { |
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419 if (len > max_len) |
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420 { |
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421 max_len = len; |
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422 chm.resize (elements, max_len, 0); |
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423 } |
6151 | 424 |
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425 chm.insert (tmp, i, 0); |
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426 } |
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427 } |
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428 else |
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429 { |
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430 error ("load: failed to extract string length for element %d", |
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431 i+1); |
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432 success = false; |
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433 } |
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434 } |
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435 |
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436 if (! error_state) |
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437 matrix = chm; |
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438 } |
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439 else |
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440 { |
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441 error ("load: failed to extract number of string elements"); |
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442 success = false; |
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443 } |
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444 } |
5099 | 445 else if (kw == "length") |
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446 { |
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447 int len = val; |
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448 |
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449 if (len >= 0) |
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450 { |
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451 // This is cruft for backward compatiability, |
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452 // but relatively harmless. |
4805 | 453 |
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454 // Use this instead of a C-style character buffer so |
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455 // that we can properly handle embedded NUL characters. |
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456 charMatrix tmp (1, len); |
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457 char *ptmp = tmp.fortran_vec (); |
4805 | 458 |
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459 if (len > 0 && ! is.read (ptmp, len)) |
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460 { |
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461 error ("load: failed to load string constant"); |
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462 } |
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463 else |
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464 { |
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465 if (is) |
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466 matrix = tmp; |
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467 else |
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468 error ("load: failed to load string constant"); |
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469 } |
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470 } |
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471 } |
5099 | 472 else |
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473 panic_impossible (); |
5099 | 474 } |
475 else | |
476 { | |
477 error ("load: failed to extract number of rows and columns"); | |
478 success = false; | |
4687 | 479 } |
480 | |
481 return success; | |
482 } | |
483 | |
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484 bool |
4687 | 485 octave_char_matrix_str::save_binary (std::ostream& os, |
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486 bool& /* save_as_floats */) |
4687 | 487 { |
4805 | 488 dim_vector d = dims (); |
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489 if (d.length () < 1) |
4805 | 490 return false; |
491 | |
492 // Use negative value for ndims to differentiate with old format!! | |
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493 int32_t tmp = - d.length (); |
5760 | 494 os.write (reinterpret_cast<char *> (&tmp), 4); |
4805 | 495 for (int i=0; i < d.length (); i++) |
4687 | 496 { |
4805 | 497 tmp = d(i); |
5760 | 498 os.write (reinterpret_cast<char *> (&tmp), 4); |
4687 | 499 } |
4805 | 500 |
501 charNDArray m = char_array_value (); | |
502 os.write (m.fortran_vec (), d.numel ()); | |
4687 | 503 return true; |
504 } | |
505 | |
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506 bool |
4687 | 507 octave_char_matrix_str::load_binary (std::istream& is, bool swap, |
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508 oct_mach_info::float_format /* fmt */) |
4687 | 509 { |
5828 | 510 int32_t elements; |
5760 | 511 if (! is.read (reinterpret_cast<char *> (&elements), 4)) |
4687 | 512 return false; |
513 if (swap) | |
4944 | 514 swap_bytes<4> (&elements); |
4805 | 515 |
516 if (elements < 0) | |
4687 | 517 { |
5828 | 518 int32_t mdims = - elements; |
519 int32_t di; | |
4805 | 520 dim_vector dv; |
521 dv.resize (mdims); | |
522 | |
523 for (int i = 0; i < mdims; i++) | |
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524 { |
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525 if (! is.read (reinterpret_cast<char *> (&di), 4)) |
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526 return false; |
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527 if (swap) |
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528 swap_bytes<4> (&di); |
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529 dv(i) = di; |
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530 } |
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531 |
5157 | 532 // Convert an array with a single dimension to be a row vector. |
533 // Octave should never write files like this, other software | |
534 // might. | |
535 | |
536 if (mdims == 1) | |
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537 { |
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538 mdims = 2; |
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539 dv.resize (mdims); |
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540 dv(1) = dv(0); |
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541 dv(0) = 1; |
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542 } |
5157 | 543 |
4805 | 544 charNDArray m(dv); |
545 char *tmp = m.fortran_vec (); | |
546 is.read (tmp, dv.numel ()); | |
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547 |
4805 | 548 if (error_state || ! is) |
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549 return false; |
4805 | 550 matrix = m; |
551 } | |
552 else | |
553 { | |
554 charMatrix chm (elements, 0); | |
555 int max_len = 0; | |
556 for (int i = 0; i < elements; i++) | |
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557 { |
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558 int32_t len; |
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559 if (! is.read (reinterpret_cast<char *> (&len), 4)) |
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560 return false; |
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561 if (swap) |
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562 swap_bytes<4> (&len); |
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563 charMatrix btmp (1, len); |
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564 char *pbtmp = btmp.fortran_vec (); |
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565 if (! is.read (pbtmp, len)) |
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566 return false; |
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567 if (len > max_len) |
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568 { |
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569 max_len = len; |
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570 chm.resize (elements, max_len, 0); |
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571 } |
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572 chm.insert (btmp, i, 0); |
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573 } |
4805 | 574 matrix = chm; |
4687 | 575 } |
576 return true; | |
577 } | |
578 | |
579 #if defined (HAVE_HDF5) | |
4944 | 580 |
4687 | 581 bool |
582 octave_char_matrix_str::save_hdf5 (hid_t loc_id, const char *name, | |
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583 bool /* save_as_floats */) |
4687 | 584 { |
4837 | 585 dim_vector dv = dims (); |
586 int empty = save_hdf5_empty (loc_id, name, dv); | |
587 if (empty) | |
4805 | 588 return (empty > 0); |
4687 | 589 |
4837 | 590 int rank = dv.length (); |
4805 | 591 hid_t space_hid = -1, data_hid = -1; |
592 bool retval = true; | |
593 charNDArray m = char_array_value (); | |
594 | |
595 OCTAVE_LOCAL_BUFFER (hsize_t, hdims, rank); | |
4687 | 596 |
4805 | 597 // Octave uses column-major, while HDF5 uses row-major ordering |
598 for (int i = 0; i < rank; i++) | |
4837 | 599 hdims[i] = dv (rank-i-1); |
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600 |
4815 | 601 space_hid = H5Screate_simple (rank, hdims, 0); |
4805 | 602 if (space_hid < 0) |
603 return false; | |
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604 #if HAVE_HDF5_18 |
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605 data_hid = H5Dcreate (loc_id, name, H5T_NATIVE_CHAR, space_hid, |
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606 H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); |
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607 #else |
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608 data_hid = H5Dcreate (loc_id, name, H5T_NATIVE_CHAR, space_hid, |
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609 H5P_DEFAULT); |
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610 #endif |
4805 | 611 if (data_hid < 0) |
4687 | 612 { |
4805 | 613 H5Sclose (space_hid); |
4687 | 614 return false; |
615 } | |
616 | |
4837 | 617 OCTAVE_LOCAL_BUFFER (char, s, dv.numel ()); |
4687 | 618 |
4837 | 619 for (int i = 0; i < dv.numel (); ++i) |
4805 | 620 s[i] = m(i); |
4687 | 621 |
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622 retval = H5Dwrite (data_hid, H5T_NATIVE_CHAR, H5S_ALL, H5S_ALL, |
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623 H5P_DEFAULT, s) >= 0; |
4687 | 624 |
625 H5Dclose (data_hid); | |
626 H5Sclose (space_hid); | |
4837 | 627 |
4687 | 628 return retval; |
629 } | |
630 | |
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631 bool |
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632 octave_char_matrix_str::load_hdf5 (hid_t loc_id, const char *name) |
4687 | 633 { |
4837 | 634 bool retval = false; |
635 | |
4805 | 636 dim_vector dv; |
637 int empty = load_hdf5_empty (loc_id, name, dv); | |
638 if (empty > 0) | |
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639 matrix.resize (dv); |
4837 | 640 if (empty) |
641 return (empty > 0); | |
4805 | 642 |
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643 #if HAVE_HDF5_18 |
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644 hid_t data_hid = H5Dopen (loc_id, name, H5P_DEFAULT); |
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645 #else |
4687 | 646 hid_t data_hid = H5Dopen (loc_id, name); |
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647 #endif |
4687 | 648 hid_t space_hid = H5Dget_space (data_hid); |
649 hsize_t rank = H5Sget_simple_extent_ndims (space_hid); | |
650 hid_t type_hid = H5Dget_type (data_hid); | |
4805 | 651 hid_t type_class_hid = H5Tget_class (type_hid); |
4687 | 652 |
4805 | 653 if (type_class_hid == H5T_INTEGER) |
4687 | 654 { |
4805 | 655 if (rank < 1) |
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656 { |
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657 H5Tclose (type_hid); |
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658 H5Sclose (space_hid); |
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659 H5Dclose (data_hid); |
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660 return false; |
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661 } |
4805 | 662 |
663 OCTAVE_LOCAL_BUFFER (hsize_t, hdims, rank); | |
664 OCTAVE_LOCAL_BUFFER (hsize_t, maxdims, rank); | |
665 | |
666 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); | |
667 | |
668 // Octave uses column-major, while HDF5 uses row-major ordering | |
669 if (rank == 1) | |
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670 { |
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671 dv.resize (2); |
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672 dv(0) = 1; |
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673 dv(1) = hdims[0]; |
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674 } |
4687 | 675 else |
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676 { |
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677 dv.resize (rank); |
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678 for (hsize_t i = 0, j = rank - 1; i < rank; i++, j--) |
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679 dv(j) = hdims[i]; |
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680 } |
4805 | 681 |
682 charNDArray m (dv); | |
683 char *str = m.fortran_vec (); | |
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684 if (H5Dread (data_hid, H5T_NATIVE_CHAR, H5S_ALL, H5S_ALL, |
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685 H5P_DEFAULT, str) >= 0) |
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686 { |
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687 retval = true; |
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688 matrix = m; |
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689 } |
4805 | 690 |
691 H5Tclose (type_hid); | |
692 H5Sclose (space_hid); | |
693 H5Dclose (data_hid); | |
694 return true; | |
695 } | |
696 else | |
697 { | |
698 // This is cruft for backward compatiability and easy data | |
699 // importation | |
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700 if (rank == 0) //FIXME: Does rank==0 even exist for strings in HDF5? |
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|
701 { |
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702 // a single string: |
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703 int slen = H5Tget_size (type_hid); |
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704 if (slen < 0) |
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|
705 { |
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706 H5Tclose (type_hid); |
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707 H5Sclose (space_hid); |
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708 H5Dclose (data_hid); |
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709 return false; |
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|
710 } |
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711 else |
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|
712 { |
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713 OCTAVE_LOCAL_BUFFER (char, s, slen); |
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714 // create datatype for (null-terminated) string |
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715 // to read into: |
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716 hid_t st_id = H5Tcopy (H5T_C_S1); |
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Fix loading of string arrays from 3rd party hdf5 files (bug #38789)
Markus Appel <masolomaster3000@gmail.com>
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717 H5Tset_size (st_id, slen+1); |
17787
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Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
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diff
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|
718 if (H5Dread (data_hid, st_id, H5S_ALL, |
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Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
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diff
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719 H5S_ALL, H5P_DEFAULT, s) < 0) |
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720 { |
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721 H5Tclose (st_id); |
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722 H5Tclose (type_hid); |
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723 H5Sclose (space_hid); |
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724 H5Dclose (data_hid); |
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725 return false; |
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726 } |
4687 | 727 |
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728 matrix = charMatrix (s); |
11586
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strip trailing whitespace from source files
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diff
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|
729 |
10315
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730 H5Tclose (st_id); |
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731 H5Tclose (type_hid); |
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732 H5Sclose (space_hid); |
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733 H5Dclose (data_hid); |
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734 return true; |
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|
735 } |
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736 } |
4805 | 737 else if (rank == 1) |
10315
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|
738 { |
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|
739 // string vector |
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740 hsize_t elements, maxdim; |
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741 H5Sget_simple_extent_dims (space_hid, &elements, &maxdim); |
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742 int slen = H5Tget_size (type_hid); |
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changeset
|
743 if (slen < 0) |
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diff
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|
744 { |
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|
745 H5Tclose (type_hid); |
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|
746 H5Sclose (space_hid); |
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changeset
|
747 H5Dclose (data_hid); |
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|
748 return false; |
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|
749 } |
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diff
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|
750 else |
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diff
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|
751 { |
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752 // hdf5 string arrays store strings of all the |
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untabify src C++ source files
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753 // same physical length (I think), which is |
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|
754 // slightly wasteful, but oh well. |
11586
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strip trailing whitespace from source files
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diff
changeset
|
755 |
17643
d0a197b9962a
Fix loading of string arrays from 3rd party hdf5 files (bug #38789)
Markus Appel <masolomaster3000@gmail.com>
parents:
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diff
changeset
|
756 OCTAVE_LOCAL_BUFFER (char, s, elements * (slen+1)); |
4805 | 757 |
10315
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changeset
|
758 // create datatype for (null-terminated) string |
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parents:
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diff
changeset
|
759 // to read into: |
57a59eae83cc
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parents:
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diff
changeset
|
760 hid_t st_id = H5Tcopy (H5T_C_S1); |
17643
d0a197b9962a
Fix loading of string arrays from 3rd party hdf5 files (bug #38789)
Markus Appel <masolomaster3000@gmail.com>
parents:
15195
diff
changeset
|
761 H5Tset_size (st_id, slen+1); |
4805 | 762 |
17787
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
763 if (H5Dread (data_hid, st_id, H5S_ALL, |
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
764 H5S_ALL, H5P_DEFAULT, s) < 0) |
10315
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untabify src C++ source files
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diff
changeset
|
765 { |
57a59eae83cc
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diff
changeset
|
766 H5Tclose (st_id); |
57a59eae83cc
untabify src C++ source files
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diff
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|
767 H5Tclose (type_hid); |
57a59eae83cc
untabify src C++ source files
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changeset
|
768 H5Sclose (space_hid); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
769 H5Dclose (data_hid); |
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changeset
|
770 return false; |
57a59eae83cc
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diff
changeset
|
771 } |
4805 | 772 |
17643
d0a197b9962a
Fix loading of string arrays from 3rd party hdf5 files (bug #38789)
Markus Appel <masolomaster3000@gmail.com>
parents:
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diff
changeset
|
773 charMatrix chm (elements, slen, ' '); |
10315
57a59eae83cc
untabify src C++ source files
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|
774 for (hsize_t i = 0; i < elements; ++i) |
57a59eae83cc
untabify src C++ source files
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|
775 { |
17643
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Fix loading of string arrays from 3rd party hdf5 files (bug #38789)
Markus Appel <masolomaster3000@gmail.com>
parents:
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diff
changeset
|
776 chm.insert (s + i*(slen+1), i, 0); |
10315
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untabify src C++ source files
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diff
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|
777 } |
4805 | 778 |
10315
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untabify src C++ source files
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779 matrix = chm; |
4805 | 780 |
10315
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diff
changeset
|
781 H5Tclose (st_id); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
782 H5Tclose (type_hid); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
783 H5Sclose (space_hid); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
784 H5Dclose (data_hid); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
785 return true; |
57a59eae83cc
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diff
changeset
|
786 } |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
787 } |
4805 | 788 else |
10315
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
789 { |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
790 H5Tclose (type_hid); |
57a59eae83cc
untabify src C++ source files
John W. Eaton <jwe@octave.org>
parents:
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diff
changeset
|
791 H5Sclose (space_hid); |
57a59eae83cc
untabify src C++ source files
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diff
changeset
|
792 H5Dclose (data_hid); |
57a59eae83cc
untabify src C++ source files
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parents:
10160
diff
changeset
|
793 return false; |
57a59eae83cc
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diff
changeset
|
794 } |
4687 | 795 } |
4837 | 796 |
797 return retval; | |
4687 | 798 } |
4944 | 799 |
4687 | 800 #endif |