annotate scripts/statistics/distributions/tpdf.m @ 14138:72c96de7a403 stable

maint: update copyright notices for 2012
author John W. Eaton <jwe@octave.org>
date Mon, 02 Jan 2012 14:25:41 -0500
parents 583830ce6afa
children f3d52523cde1
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
14138
72c96de7a403 maint: update copyright notices for 2012
John W. Eaton <jwe@octave.org>
parents: 13181
diff changeset
1 ## Copyright (C) 2012 Rik Wehbring
72c96de7a403 maint: update copyright notices for 2012
John W. Eaton <jwe@octave.org>
parents: 13181
diff changeset
2 ## Copyright (C) 1995-2012 Kurt Hornik
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
3 ##
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
4 ## This file is part of Octave.
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
5 ##
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
6 ## Octave is free software; you can redistribute it and/or modify it
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
7 ## under the terms of the GNU General Public License as published by
7016
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6046
diff changeset
8 ## the Free Software Foundation; either version 3 of the License, or (at
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6046
diff changeset
9 ## your option) any later version.
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
10 ##
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
11 ## Octave is distributed in the hope that it will be useful, but
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
12 ## WITHOUT ANY WARRANTY; without even the implied warranty of
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
13 ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
14 ## General Public License for more details.
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
15 ##
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
16 ## You should have received a copy of the GNU General Public License
7016
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6046
diff changeset
17 ## along with Octave; see the file COPYING. If not, see
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6046
diff changeset
18 ## <http://www.gnu.org/licenses/>.
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
19
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
20 ## -*- texinfo -*-
5411
bee21f388110 [project @ 2005-07-13 17:53:44 by jwe]
jwe
parents: 5410
diff changeset
21 ## @deftypefn {Function File} {} tpdf (@var{x}, @var{n})
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
22 ## For each element of @var{x}, compute the probability density function
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
23 ## (PDF) at @var{x} of the @var{t} (Student) distribution with @var{n}
11587
c792872f8942 all script files: untabify and strip trailing whitespace
John W. Eaton <jwe@octave.org>
parents: 11523
diff changeset
24 ## degrees of freedom.
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
25 ## @end deftypefn
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
26
5428
2a16423e4aa0 [project @ 2005-08-23 18:38:27 by jwe]
jwe
parents: 5411
diff changeset
27 ## Author: KH <Kurt.Hornik@wu-wien.ac.at>
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
28 ## Description: PDF of the t distribution
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
29
5411
bee21f388110 [project @ 2005-07-13 17:53:44 by jwe]
jwe
parents: 5410
diff changeset
30 function pdf = tpdf (x, n)
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
31
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
32 if (nargin != 2)
6046
34f96dd5441b [project @ 2006-10-10 16:10:25 by jwe]
jwe
parents: 5428
diff changeset
33 print_usage ();
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
34 endif
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
35
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
36 if (!isscalar (n))
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
37 [retval, x, n] = common_size (x, n);
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
38 if (retval > 0)
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
39 error ("tpdf: X and N must be of common size or scalars");
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
40 endif
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
41 endif
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
42
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
43 if (iscomplex (x) || iscomplex (n))
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
44 error ("tpdf: X and N must not be complex");
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
45 endif
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
46
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
47 if (isa (x, "single") || isa (n, "single"))
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
48 pdf = zeros (size (x), "single");
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
49 else
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
50 pdf = zeros (size (x));
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
51 endif
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
52
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
53 k = isnan (x) | !(n > 0) | !(n < Inf);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
54 pdf(k) = NaN;
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
55
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
56 k = !isinf (x) & !isnan (x) & (n > 0) & (n < Inf);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
57 if (isscalar (n))
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
58 pdf(k) = (exp (- (n + 1) * log (1 + x(k) .^ 2 / n)/2)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
59 / (sqrt (n) * beta (n/2, 1/2)));
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
60 else
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
61 pdf(k) = (exp (- (n(k) + 1) .* log (1 + x(k) .^ 2 ./ n(k))/2)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
62 ./ (sqrt (n(k)) .* beta (n(k)/2, 1/2)));
5410
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
63 endif
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
64
56e066f5efc1 [project @ 2005-07-13 17:43:35 by jwe]
jwe
parents:
diff changeset
65 endfunction
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
66
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
67
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
68 %!test
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
69 %! x = rand (10,1);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
70 %! y = 1./(pi * (1 + x.^2));
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
71 %! assert(tpdf (x, 1), y, 5*eps);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
72
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
73 %!shared x,y
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
74 %! x = [-Inf 0 0.5 1 Inf];
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
75 %! y = 1./(pi * (1 + x.^2));
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
76 %!assert(tpdf (x, ones(1,5)), y, eps);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
77 %!assert(tpdf (x, 1), y, eps);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
78 %!assert(tpdf (x, [0 NaN 1 1 1]), [NaN NaN y(3:5)], eps);
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
79
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
80 %% Test class of input preserved
13181
583830ce6afa tpdf.m: Add eps to assert tests for passage on Mac OS
Rik <octave@nomad.inbox5.com>
parents: 13171
diff changeset
81 %!assert(tpdf ([x, NaN], 1), [y, NaN], eps);
13171
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
82 %!assert(tpdf (single([x, NaN]), 1), single([y, NaN]), eps("single"));
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
83 %!assert(tpdf ([x, NaN], single(1)), single([y, NaN]), eps("single"));
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
84
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
85 %% Test input validation
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
86 %!error tpdf ()
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
87 %!error tpdf (1)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
88 %!error tpdf (1,2,3)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
89 %!error tpdf (ones(3),ones(2))
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
90 %!error tpdf (ones(2),ones(3))
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
91 %!error tpdf (i, 2)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
92 %!error tpdf (2, i)
19b9f17d22af Overhaul of statistical distribution functions
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
93