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changeset 7036:daff886a8e2a

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[project @ 2007-10-17 19:02:10 by jwe]
author jwe
date Wed, 17 Oct 2007 19:02:11 +0000
parents a2000c2b5e7d
children b1ca2c453b77
files ChangeLog configure.in liboctave/CSparse.cc liboctave/ChangeLog liboctave/dSparse.cc liboctave/oct-sparse.h liboctave/sparse-base-chol.cc src/ChangeLog src/DLD-FUNCTIONS/spchol.cc
diffstat 9 files changed, 24 insertions(+), 223 deletions(-) [+]
line wrap: on
line diff
--- a/ChangeLog	Wed Oct 17 15:38:54 2007 +0000
+++ b/ChangeLog	Wed Oct 17 19:02:11 2007 +0000
@@ -1,3 +1,7 @@
+2007-10-17  John W. Eaton  <jwe@octave.org>
+
+	* configure.in: Delete checks for METIS.
+
 2007-10-12  John W. Eaton  <jwe@octave.org>
 
 	* mk-opts.pl (parse_input): Allow comment lines beginning with #.
--- a/configure.in	Wed Oct 17 15:38:54 2007 +0000
+++ b/configure.in	Wed Oct 17 19:02:11 2007 +0000
@@ -29,7 +29,7 @@
 EXTERN_CXXFLAGS="$CXXFLAGS"
 
 AC_INIT
-AC_REVISION($Revision: 1.581 $)
+AC_REVISION($Revision: 1.582 $)
 AC_PREREQ(2.57)
 AC_CONFIG_SRCDIR([src/octave.cc])
 AC_CONFIG_HEADER(config.h)
@@ -968,27 +968,12 @@
 	test "$with_ccolamd" = yes && test "$with_amd" = yes; then
   with_cholmod=no
   AC_CHECK_HEADERS([suitesparse/cholmod.h ufsparse/cholmod.h cholmod/cholmod.h cholmod.h], [
-    AC_CHECK_HEADERS([suitesparse/metis.h ufsparse/metis.h metis/metis.h metis.h], [
-      AC_CHECK_LIB(metis, METIS_NodeND, with_metis=yes, with_metis=no)
-      break],
-      with_metis=no)
-
-    if test "$with_metis" = yes; then
-      AC_DEFINE(HAVE_METIS, 1, [Define if the METIS library is used.])
-      AC_CHECK_LIB(cholmod, cholmod_start, [CHOLMOD_LIBS="-lcholmod -lmetis"; 
-	with_cholmod=yes], [
-        AC_CHECK_LIB(cholmod, cholmod_start, 
-	  [CHOLMOD_LIBS="-lcholmod -cblas -lmetis"; with_cholmod=yes], [],
-          $CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS -lmetis)],
-	$CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS -lmetis)
-    else
-      AC_CHECK_LIB(cholmod, cholmod_start, [CHOLMOD_LIBS="-lcholmod"; 
-	with_cholmod=yes], [
-        AC_CHECK_LIB(cholmod, cholmod_start, [CHOLMOD_LIBS="-lcholmod -cblas"; 
-	  with_cholmod=yes], [],
-          $CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS)],
-	$CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS)
-    fi
+    AC_CHECK_LIB(cholmod, cholmod_start, [CHOLMOD_LIBS="-lcholmod"; 
+      with_cholmod=yes], [
+      AC_CHECK_LIB(cholmod, cholmod_start, [CHOLMOD_LIBS="-lcholmod -cblas"; 
+	with_cholmod=yes], [],
+	$CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS)],
+      $CAMD_LIBS $AMD_LIBS $COLAMD_LIBS $CCOLAMD_LIBS $BLAS_LIBS $FLIBS)
 
     if test "$with_cholmod" = yes; then
       AC_DEFINE(HAVE_CHOLMOD, 1, [Define if the CHOLMOD library is used.])
--- a/liboctave/CSparse.cc	Wed Oct 17 15:38:54 2007 +0000
+++ b/liboctave/CSparse.cc	Wed Oct 17 19:02:11 2007 +0000
@@ -5770,23 +5770,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for
-	  // METIS, which allocates a huge block of memory (and then
-	  // immediately frees it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free.
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6030,26 +6013,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6341,26 +6304,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6583,26 +6526,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
--- a/liboctave/ChangeLog	Wed Oct 17 15:38:54 2007 +0000
+++ b/liboctave/ChangeLog	Wed Oct 17 19:02:11 2007 +0000
@@ -1,3 +1,12 @@
+2007-10-17  John W. Eaton  <jwe@octave.org>
+
+	* oct-sparse.h: Don't include metis.h.
+
+	* dSparse.cc (SparseMatrix::fsolve): Delete special code for METIS.
+	* CSparse.cc (SparseComplexMatrix::fsolve): Likewise.
+	* sparse-base-chol.cc (sparse_base_chol<chol_type, chol_elt,
+	p_type>::sparse_base_chol_rep::init): Likewise.
+
 2007-10-16  John W. Eaton  <jwe@octave.org>
 
 	* dMatrix.cc (Matrix::inverse): Only check rcond == 0 if the
--- a/liboctave/dSparse.cc	Wed Oct 17 15:38:54 2007 +0000
+++ b/liboctave/dSparse.cc	Wed Oct 17 19:02:11 2007 +0000
@@ -5986,24 +5986,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for
-	  // METIS, which allocates a huge block of memory (and then
-	  // immediately frees it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free.
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6220,26 +6202,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6502,26 +6464,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
@@ -6756,26 +6698,6 @@
 	  cm->complex_divide = CHOLMOD_NAME(divcomplex);
 	  cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-	  // METIS 4.0.1 uses malloc and free, and will terminate MATLAB if
-	  // it runs out of memory.  Use CHOLMOD's memory guard for METIS, 
-	  // which mxMalloc's a huge block of memory (and then immediately 
-	  // mxFree's it) before calling METIS
-	  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-	  // METIS 4.0.2 uses function pointers for malloc and free
-	  METIS_malloc = cm->malloc_memory;
-	  METIS_free   = cm->free_memory;
-	  // Turn off METIS memory guard.  It is not needed, because mxMalloc
-	  // will safely terminate the mexFunction and free any workspace
-	  // without killing all of octave.
-	  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
 	  cm->final_ll = true;
 
 	  cholmod_sparse Astore;
--- a/liboctave/oct-sparse.h	Wed Oct 17 15:38:54 2007 +0000
+++ b/liboctave/oct-sparse.h	Wed Oct 17 19:02:11 2007 +0000
@@ -57,16 +57,6 @@
 #include <ccolamd.h>
 #endif
 
-#if defined (HAVE_SUITESPARSE_METIS_H)
-#include <suitesparse/metis.h>
-#elif defined (HAVE_UFSPARSE_METIS_H)
-#include <ufsparse/metis.h>
-#elif defined (HAVE_METIS_METIS_H)
-#include <metis/metis.h>
-#elif defined (HAVE_METIS_H)
-#include <metis.h>
-#endif
-
 #if defined (HAVE_SUITESPARSE_CHOLMOD_H)
 #include <suitesparse/cholmod.h>
 #elif defined (HAVE_UFSPARSE_CHOLMOD_H)
--- a/liboctave/sparse-base-chol.cc	Wed Oct 17 15:38:54 2007 +0000
+++ b/liboctave/sparse-base-chol.cc	Wed Oct 17 19:02:11 2007 +0000
@@ -116,24 +116,6 @@
   cm->complex_divide = CHOLMOD_NAME(divcomplex);
   cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-  // METIS 4.0.1 uses malloc and free, and will terminate if it runs
-  // out of memory.  Use CHOLMOD's memory guard for METIS, which
-  // allocates a huge block of memory (and then immediately frees it)
-  // before calling METIS
-  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-  // METIS 4.0.2 uses function pointers for malloc and free.
-  METIS_malloc = cm->malloc_memory;
-  METIS_free   = cm->free_memory;
-  // Turn off METIS memory guard.
-  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-
   cm->final_asis = false;
   cm->final_super = false;
   cm->final_ll = true;
--- a/src/ChangeLog	Wed Oct 17 15:38:54 2007 +0000
+++ b/src/ChangeLog	Wed Oct 17 19:02:11 2007 +0000
@@ -1,3 +1,7 @@
+2007-10-17  John W. Eaton  <jwe@octave.org>
+
+	* DLD-FUNCTIONS/spchol.cc (Fsymbfact): Delete special code for METIS.
+
 2007-10-17  Gabriele Pannocchia  <g.pannocchia@ing.unipi.it>
 
 	* DLD-FUNCTIONS/__qp__.cc (qp): Fix check for Wact(j).
--- a/src/DLD-FUNCTIONS/spchol.cc	Wed Oct 17 15:38:54 2007 +0000
+++ b/src/DLD-FUNCTIONS/spchol.cc	Wed Oct 17 19:02:11 2007 +0000
@@ -415,24 +415,6 @@
   cm->complex_divide = CHOLMOD_NAME(divcomplex);
   cm->hypotenuse = CHOLMOD_NAME(hypot);
 
-#ifdef HAVE_METIS
-  // METIS 4.0.1 uses malloc and free, and will terminate if it runs
-  // out of memory.  Use CHOLMOD's memory guard for METIS, which
-  // allocates a huge block of memory (and then immediately frees it)
-  // before calling METIS.
-  cm->metis_memory = 2.0;
-
-#if defined(METIS_VERSION)
-#if (METIS_VERSION >= METIS_VER(4,0,2))
-  // METIS 4.0.2 uses function pointers for malloc and free.
-  METIS_malloc = cm->malloc_memory;
-  METIS_free   = cm->free_memory;
-  // Turn off METIS memory guard.
-  cm->metis_memory   = 0.0;
-#endif
-#endif
-#endif
-  
   double dummy;
   cholmod_sparse Astore;
   cholmod_sparse *A = &Astore;