annotate libinterp/dldfcn/dmperm.cc @ 21211:2cf8bc5c7017

use "#if defined (HAVE_FOO)" instead of "#if HAVE_FOO" for feature tests * configure.ac (HAVE_HDF5_INT2FLOAT_CONVERSIONS): AC_DEFINE here. * ls-hdf5.cc (HAVE_HDF5_INT2FLOAT_CONVERSION): Delete definition. * ls-hdf5.cc, ls-hdf5.h, ccolamd.cc, dmperm.cc, ov-base-int.cc, ov-bool-mat.cc, ov-bool-sparse.cc, ov-bool.cc, ov-cell.cc, ov-class.cc, ov-complex.cc, ov-cx-mat.cc, ov-cx-sparse.cc, ov-fcn-handle.cc, ov-fcn-inline.cc, ov-float.cc, ov-flt-complex.cc, ov-flt-cx-mat.cc, ov-flt-re-mat.cc, ov-java.cc, ov-range.cc, ov-re-mat.cc, ov-re-sparse.cc, ov-scalar.cc, ov-str-mat.cc, ov-struct.cc, pt-eval.cc: Use #if defined (HAVE_FOO) instead of #if HAVE_FOO.
author John W. Eaton <jwe@octave.org>
date Sat, 06 Feb 2016 08:48:47 -0500
parents fcac5dbbf9ed
children a83e7a384ee0
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1 /*
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2
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3 Copyright (C) 2005-2015 David Bateman
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4 Copyright (C) 1998-2005 Andy Adler
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5
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6 This file is part of Octave.
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7
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8 Octave is free software; you can redistribute it and/or modify it
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9 under the terms of the GNU General Public License as published by the
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10 Free Software Foundation; either version 3 of the License, or (at your
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11 option) any later version.
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12
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13 Octave is distributed in the hope that it will be useful, but WITHOUT
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14 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
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15 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
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16 for more details.
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17
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18 You should have received a copy of the GNU General Public License
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19 along with Octave; see the file COPYING. If not, see
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20 <http://www.gnu.org/licenses/>.
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21
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22 */
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23
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24 #ifdef HAVE_CONFIG_H
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25 # include <config.h>
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26 #endif
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27
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28 #include "defun-dld.h"
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29 #include "error.h"
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30 #include "errwarn.h"
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31 #include "ovl.h"
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32 #include "utils.h"
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33
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34 #include "oct-sparse.h"
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35 #include "ov-re-sparse.h"
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36 #include "ov-cx-sparse.h"
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37 #include "sparse-qr.h"
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38
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39 #if defined (ENABLE_64)
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40 # define CXSPARSE_NAME(name) cs_dl ## name
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41 #else
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42 # define CXSPARSE_NAME(name) cs_di ## name
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43 #endif
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44
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45 static RowVector
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46 put_int (octave_idx_type *p, octave_idx_type n)
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47 {
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48 RowVector ret (n);
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49 for (octave_idx_type i = 0; i < n; i++)
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50 ret.xelem (i) = p[i] + 1;
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51 return ret;
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52 }
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53
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54 #if defined (HAVE_CXSPARSE)
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55 static octave_value_list
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56 dmperm_internal (bool rank, const octave_value arg, int nargout)
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57 {
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58 octave_value_list retval;
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59 octave_idx_type nr = arg.rows ();
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60 octave_idx_type nc = arg.columns ();
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61 SparseMatrix m;
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62 SparseComplexMatrix cm;
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63 CXSPARSE_NAME () csm;
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64 csm.m = nr;
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65 csm.n = nc;
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66 csm.x = 0;
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67 csm.nz = -1;
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68
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69 if (arg.is_real_type ())
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70 {
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71 m = arg.sparse_matrix_value ();
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72 csm.nzmax = m.nnz ();
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73 csm.p = m.xcidx ();
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74 csm.i = m.xridx ();
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75 }
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76 else
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77 {
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78 cm = arg.sparse_complex_matrix_value ();
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79 csm.nzmax = cm.nnz ();
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80 csm.p = cm.xcidx ();
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81 csm.i = cm.xridx ();
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82 }
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83
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84 if (nargout <= 1 || rank)
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85 {
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86 octave_idx_type *jmatch = CXSPARSE_NAME (_maxtrans) (&csm, 0);
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87 if (rank)
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88 {
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89 octave_idx_type r = 0;
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90 for (octave_idx_type i = 0; i < nc; i++)
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91 if (jmatch[nr+i] >= 0)
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92 r++;
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93 retval(0) = static_cast<double>(r);
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94 }
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95 else
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96 retval(0) = put_int (jmatch + nr, nc);
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97 CXSPARSE_NAME (_free) (jmatch);
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98 }
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99 else
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100 {
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101 CXSPARSE_NAME (d) *dm = CXSPARSE_NAME(_dmperm) (&csm, 0);
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102
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103 //retval(5) = put_int (dm->rr, 5);
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104 //retval(4) = put_int (dm->cc, 5);
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105 retval = ovl (put_int (dm->p, nr), put_int (dm->q, nc),
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106 put_int (dm->r, dm->nb+1), put_int (dm->s, dm->nb+1));
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107
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108 CXSPARSE_NAME (_dfree) (dm);
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109 }
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110
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111 return retval;
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112 }
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113 #endif
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114
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115 DEFUN_DLD (dmperm, args, nargout,
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116 "-*- texinfo -*-\n\
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117 @deftypefn {} {@var{p} =} dmperm (@var{S})\n\
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118 @deftypefnx {} {[@var{p}, @var{q}, @var{r}, @var{S}] =} dmperm (@var{S})\n\
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119 \n\
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120 @cindex @nospell{Dulmage-Mendelsohn} decomposition\n\
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121 Perform a @nospell{Dulmage-Mendelsohn} permutation of the sparse matrix\n\
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122 @var{S}.\n\
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123 \n\
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124 With a single output argument @code{dmperm} performs the row permutations\n\
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125 @var{p} such that @code{@var{S}(@var{p},:)} has no zero elements on the\n\
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126 diagonal.\n\
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127 \n\
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128 Called with two or more output arguments, returns the row and column\n\
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129 permutations, such that @code{@var{S}(@var{p}, @var{q})} is in block\n\
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130 triangular form. The values of @var{r} and @var{S} define the boundaries\n\
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131 of the blocks. If @var{S} is square then @code{@var{r} == @var{S}}.\n\
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132 \n\
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133 The method used is described in: @nospell{A. Pothen & C.-J. Fan.}\n\
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134 @cite{Computing the Block Triangular Form of a Sparse Matrix}.\n\
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135 ACM Trans. Math. Software, 16(4):303-324, 1990.\n\
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136 @seealso{colamd, ccolamd}\n\
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137 @end deftypefn")
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138 {
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139 #if defined (HAVE_CXSPARSE)
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140
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141 if (args.length () != 1)
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142 print_usage ();
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143
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144 return ovl (dmperm_internal (false, args(0), nargout));
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145
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146 #else
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147 err_disabled_feature ("dmperm", "CXSparse");
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148 #endif
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149 }
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150
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151 /*
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152 %!testif HAVE_CXSPARSE
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153 %! n = 20;
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154 %! a = speye (n,n);
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155 %! a = a(randperm (n),:);
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156 %! assert (a(dmperm (a),:), speye (n));
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157
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158 %!testif HAVE_CXSPARSE
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159 %! n = 20;
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160 %! d = 0.2;
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161 %! a = tril (sprandn (n,n,d), -1) + speye (n,n);
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162 %! a = a(randperm (n), randperm (n));
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163 %! [p,q,r,s] = dmperm (a);
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164 %! assert (tril (a(p,q), -1), sparse (n, n));
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165 */
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166
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167 DEFUN_DLD (sprank, args, nargout,
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168 "-*- texinfo -*-\n\
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169 @deftypefn {} {@var{p} =} sprank (@var{S})\n\
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170 @cindex structural rank\n\
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171 \n\
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172 Calculate the structural rank of the sparse matrix @var{S}.\n\
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173 \n\
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174 Note that only the structure of the matrix is used in this calculation based\n\
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175 on a @nospell{Dulmage-Mendelsohn} permutation to block triangular form. As\n\
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176 such the numerical rank of the matrix @var{S} is bounded by\n\
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177 @code{sprank (@var{S}) >= rank (@var{S})}. Ignoring floating point errors\n\
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178 @code{sprank (@var{S}) == rank (@var{S})}.\n\
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179 @seealso{dmperm}\n\
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180 @end deftypefn")
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181 {
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182 #if defined (HAVE_CXSPARSE)
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183
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184 if (args.length () != 1)
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185 print_usage ();
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186
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187 return ovl (dmperm_internal (true, args(0), nargout));
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188
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189 #else
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190 err_disabled_feature ("sprank", "CXSparse");
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191 #endif
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192 }
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193
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194 /*
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195 %!testif HAVE_CXSPARSE
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196 %! assert (sprank (speye (20)), 20)
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197 %!testif HAVE_CXSPARSE
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198 %! assert (sprank ([1,0,2,0;2,0,4,0]), 2)
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199
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200 %!error sprank (1,2)
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201 */