annotate scripts/ode/ode15i.m @ 30895:360d330cc30e

don't change ode options.havejacfun (reverts part of e1788b1a315f) * ode15i.m, ode15s.m: Revert change of havejacfun -> havejacfcn field name used in options struct that is passed to __ode15__. If we change that field, we'll also need to change __ode15__, possibly providing a path for backward compatibility?
author John W. Eaton <jwe@octave.org>
date Tue, 05 Apr 2022 01:06:00 -0400
parents e1788b1a315f
children 260ce8667d96
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1 ########################################################################
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2 ##
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3 ## Copyright (C) 2016-2022 The Octave Project Developers
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4 ##
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5 ## See the file COPYRIGHT.md in the top-level directory of this
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6 ## distribution or <https://octave.org/copyright/>.
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7 ##
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8 ## This file is part of Octave.
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9 ##
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10 ## Octave is free software: you can redistribute it and/or modify it
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11 ## under the terms of the GNU General Public License as published by
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12 ## the Free Software Foundation, either version 3 of the License, or
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13 ## (at your option) any later version.
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14 ##
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15 ## Octave is distributed in the hope that it will be useful, but
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16 ## WITHOUT ANY WARRANTY; without even the implied warranty of
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17 ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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18 ## GNU General Public License for more details.
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19 ##
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20 ## You should have received a copy of the GNU General Public License
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21 ## along with Octave; see the file COPYING. If not, see
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22 ## <https://www.gnu.org/licenses/>.
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23 ##
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24 ########################################################################
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25
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26 ## -*- texinfo -*-
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27 ## @deftypefn {} {[@var{t}, @var{y}] =} ode15i (@var{fcn}, @var{trange}, @var{y0}, @var{yp0})
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28 ## @deftypefnx {} {[@var{t}, @var{y}] =} ode15i (@var{fcn}, @var{trange}, @var{y0}, @var{yp0}, @var{ode_opt})
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29 ## @deftypefnx {} {[@var{t}, @var{y}, @var{te}, @var{ye}, @var{ie}] =} ode15i (@dots{})
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30 ## @deftypefnx {} {@var{solution} =} ode15i (@dots{})
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31 ## @deftypefnx {} {} ode15i (@dots{})
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32 ## Solve a set of fully-implicit Ordinary Differential Equations (ODEs) or
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33 ## index 1 Differential Algebraic Equations (DAEs).
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34 ##
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35 ## @code{ode15i} uses a variable step, variable order BDF (Backward
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36 ## Differentiation Formula) method that ranges from order 1 to 5.
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37 ##
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38 ## @var{fcn} is a function handle, inline function, or string containing the
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39 ## name of the function that defines the ODE: @code{0 = f(t,y,yp)}. The
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40 ## function must accept three inputs where the first is time @var{t}, the
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41 ## second is the function value @var{y} (a column vector), and the third
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42 ## is the derivative value @var{yp} (a column vector).
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43 ##
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44 ## @var{trange} specifies the time interval over which the ODE will be
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45 ## evaluated. Typically, it is a two-element vector specifying the initial and
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46 ## final times (@code{[tinit, tfinal]}). If there are more than two elements
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47 ## then the solution will also be evaluated at these intermediate time
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48 ## instances.
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49 ##
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50 ## @var{y0} and @var{yp0} contain the initial values for the unknowns @var{y}
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51 ## and @var{yp}. If they are row vectors then the solution @var{y} will be a
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52 ## matrix in which each column is the solution for the corresponding initial
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53 ## value in @var{y0} and @var{yp0}.
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54 ##
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55 ## @var{y0} and @var{yp0} must be consistent initial conditions, meaning that
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56 ## @code{f(t,y0,yp0) = 0} is satisfied. The function @code{decic} may be used
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57 ## to compute consistent initial conditions given initial guesses.
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58 ##
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59 ## The optional fifth argument @var{ode_opt} specifies non-default options to
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60 ## the ODE solver. It is a structure generated by @code{odeset}.
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61 ##
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62 ## The function typically returns two outputs. Variable @var{t} is a
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63 ## column vector and contains the times where the solution was found. The
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64 ## output @var{y} is a matrix in which each column refers to a different
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65 ## unknown of the problem and each row corresponds to a time in @var{t}.
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66 ##
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67 ## The output can also be returned as a structure @var{solution} which has a
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68 ## field @var{x} containing a row vector of times where the solution was
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69 ## evaluated and a field @var{y} containing the solution matrix such that each
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70 ## column corresponds to a time in @var{x}. Use
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71 ## @w{@code{fieldnames (@var{solution})}} to see the other fields and
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72 ## additional information returned.
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73 ##
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74 ## If no output arguments are requested, and no @qcode{"OutputFcn"} is
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75 ## specified in @var{ode_opt}, then the @qcode{"OutputFcn"} is set to
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76 ## @code{odeplot} and the results of the solver are plotted immediately.
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77 ##
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78 ## If using the @qcode{"Events"} option then three additional outputs may be
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79 ## returned. @var{te} holds the time when an Event function returned a zero.
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80 ## @var{ye} holds the value of the solution at time @var{te}. @var{ie}
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81 ## contains an index indicating which Event function was triggered in the case
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82 ## of multiple Event functions.
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83 ##
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84 ## Example: Solve @nospell{Robertson's} equations:
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85 ##
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86 ## @smallexample
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87 ## @group
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88 ## function r = robertson_dae (@var{t}, @var{y}, @var{yp})
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89 ## r = [ -(@var{yp}(1) + 0.04*@var{y}(1) - 1e4*@var{y}(2)*@var{y}(3))
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90 ## -(@var{yp}(2) - 0.04*@var{y}(1) + 1e4*@var{y}(2)*@var{y}(3) + 3e7*@var{y}(2)^2)
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91 ## @var{y}(1) + @var{y}(2) + @var{y}(3) - 1 ];
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92 ## endfunction
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93 ## [@var{t},@var{y}] = ode15i (@@robertson_dae, [0, 1e3], [1; 0; 0], [-1e-4; 1e-4; 0]);
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94 ## @end group
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95 ## @end smallexample
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96 ## @seealso{decic, odeset, odeget}
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97 ## @end deftypefn
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98
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99 function varargout = ode15i (fcn, trange, y0, yp0, varargin)
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100
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101 if (nargin < 4)
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102 print_usage ();
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103 endif
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104
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105 solver = "ode15i";
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106
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107 n = numel (y0);
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108
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109 if (nargin > 4)
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110 options = varargin{1};
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111 else
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diff changeset
112 options = odeset ();
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
113 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
114
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
115 ## Check fcn, trange, y0, yp0
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
116 fcn = check_default_input (fcn, trange, solver, y0, yp0);
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
117
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
118 if (! isempty (options.Jacobian))
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
119 if (ischar (options.Jacobian))
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
120 if (! exist (options.Jacobian))
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
121 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
122 ['ode15i: "Jacobian" function "' options.Jacobian '" not found']);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
123 endif
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
124 options.Jacobian = str2func (options.Jacobian);
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
125 endif
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
126 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
127
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
128 if (! isempty (options.OutputFcn))
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
129 if (ischar (options.OutputFcn))
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
130 if (! exist (options.OutputFcn))
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
131 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
132 ['ode15i: "OutputFcn" function "' options.OutputFcn '" not found']);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
133 endif
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
134 options.OutputFcn = str2func (options.OutputFcn);
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
135 endif
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
136 if (! is_function_handle (options.OutputFcn))
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
137 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
138 'ode15i: "OutputFcn" must be a valid function handle');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
139 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
140 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
141
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
142 if (! isempty (options.Events))
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
143 if (ischar (options.Events))
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
144 if (! exist (options.Events))
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
145 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
146 ['ode15i: "Events" function "' options.Events '" not found']);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
147 endif
28041
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
148 options.Events = str2func (options.Events);
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
149 endif
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
150 if (! is_function_handle (options.Events))
5e44268dca6f Replace input validation relying on str2func with alternatives (bug #57351).
Rik <rik@octave.org>
parents: 27957
diff changeset
151 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
152 'ode15i: "Events" must be a valid function handle');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
153 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
154 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
155
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
156 [defaults, classes, attributes] = odedefaults (n, trange(1), trange(end));
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
157
22902
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
158 persistent ignorefields = {"NonNegative", "Mass", ...
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
159 "MStateDependence", "MvPattern", ...
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
160 "MassSingular", "InitialSlope", "BDF"};
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
161
22902
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
162 defaults = rmfield (defaults, ignorefields);
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
163 classes = rmfield (classes, ignorefields);
284bbb0328f2 Update odei5{i,s} code for Octave 4.3.0+ and Sundials 2.7.0.
Carlo de Falco <carlo.defalco@polimi.it>
parents: 22901
diff changeset
164 attributes = rmfield (attributes, ignorefields);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
165
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
166 classes = odeset (classes, "Vectorized", {});
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
167 attributes = odeset (attributes, "Jacobian", {}, "Vectorized", {});
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
168
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
169 options = odemergeopts ("ode15i", options, defaults,
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
170 classes, attributes, solver);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
171
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
172 ## Jacobian
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
173 options.havejac = false;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
174 options.havejacsparse = false;
30895
360d330cc30e don't change ode options.havejacfun (reverts part of e1788b1a315f)
John W. Eaton <jwe@octave.org>
parents: 30893
diff changeset
175 options.havejacfun = false;
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
176
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
177 if (! isempty (options.Jacobian))
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
178 options.havejac = true;
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
179 if (iscell (options.Jacobian))
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
180 if (numel (options.Jacobian) == 2)
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
181 J1 = options.Jacobian{1};
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
182 J2 = options.Jacobian{2};
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
183 if ( ! issquare (J1) || ! issquare (J2)
28660
dc80e087df4b maint: Strip trailing spaces from files.
Rik <rik@octave.org>
parents: 28047
diff changeset
184 || rows (J1) != n || rows (J2) != n
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
185 || ! isnumeric (J1) || ! isnumeric (J2)
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
186 || ! isreal (J1) || ! isreal (J2))
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
187 error ("Octave:invalid-input-arg",
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
188 'ode15i: "Jacobian" matrices must be real square matrices');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
189 endif
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
190 if (issparse (J1) && issparse (J2))
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
191 options.havejacsparse = true; # Jac is sparse cell
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
192 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
193 else
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
194 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
195 'ode15i: invalid value assigned to field "Jacobian"');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
196 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
197
25803
23483673ba43 Use is_function_handle instead of isa (x, "function_handle").
Rik <rik@octave.org>
parents: 25712
diff changeset
198 elseif (is_function_handle (options.Jacobian))
30895
360d330cc30e don't change ode options.havejacfun (reverts part of e1788b1a315f)
John W. Eaton <jwe@octave.org>
parents: 30893
diff changeset
199 options.havejacfun = true;
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
200 if (nargin (options.Jacobian) == 3)
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
201 [J1, J2] = options.Jacobian (trange(1), y0, yp0);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
202
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
203 if ( ! issquare (J1) || rows (J1) != n
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
204 || ! isnumeric (J1) || ! isreal (J1)
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
205 || ! issquare (J2) || rows (J2) != n
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
206 || ! isnumeric (J2) || ! isreal (J2))
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
207 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
208 'ode15i: "Jacobian" function must evaluate to a real square matrix');
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
209 endif
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
210 if (issparse (J1) && issparse (J2))
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
211 options.havejacsparse = true; # Jac is sparse fcn
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
212 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
213 else
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
214 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
215 'ode15i: invalid value assigned to field "Jacobian"');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
216 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
217 else
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
218 error ("Octave:invalid-input-arg",
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
219 'ode15i: "Jacobian" field must be a function handle or 2-element cell array of square matrices');
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
220 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
221 endif
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
222
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
223 ## Abstol and Reltol
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
224 options.haveabstolvec = false;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
225
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
226 if (numel (options.AbsTol) != 1 && numel (options.AbsTol) != n)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
227 error ("Octave:invalid-input-arg",
28045
13dba3c069f8 Update input validation for odeXXX.m functions.
Rik <rik@octave.org>
parents: 28044
diff changeset
228 'ode15i: invalid value assigned to field "AbsTol"');
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
229
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
230 elseif (numel (options.AbsTol) == n)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
231 options.haveabstolvec = true;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
232 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
233
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
234 ## Stats
22935
c9344df03da5 Allow case-insensitive option argument 'on' to ode solvers (bug #49918).
Rik <rik@octave.org>
parents: 22933
diff changeset
235 options.havestats = strcmpi (options.Stats, "on");
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
236
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
237 ## Don't use Refine when the output is a structure
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
238 if (nargout == 1)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
239 options.Refine = 1;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
240 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
241
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
242 ## OutputFcn and OutputSel
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
243 if (isempty (options.OutputFcn) && nargout == 0)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
244 options.OutputFcn = @odeplot;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
245 options.haveoutputfunction = true;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
246 else
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
247 options.haveoutputfunction = ! isempty (options.OutputFcn);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
248 endif
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
249
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
250 options.haveoutputselection = ! isempty (options.OutputSel);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
251 if (options.haveoutputselection)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
252 options.OutputSel = options.OutputSel - 1;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
253 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
254
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
255 ## Events
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
256 options.haveeventfunction = ! isempty (options.Events);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
257
29296
7bf91e98bfc6 __ode15__(): Consider the correct number of input arguments in the event callback (bug #59477).
Markus Meisinger <chloros2@gmx.de>
parents: 29042
diff changeset
258 ## 3 arguments in the event callback of ode15i
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
259 [t, y, te, ye, ie] = __ode15__ (fcn, trange, y0, yp0, options, 3);
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
260
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
261 if (nargout == 2)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
262 varargout{1} = t;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
263 varargout{2} = y;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
264 elseif (nargout == 1)
29025
7f103819617d ode15i.m, ode15s.m: transpose struct output for Matlab compatibility (bug #59416)
Rik <rik@octave.org>
parents: 28929
diff changeset
265 varargout{1}.x = t.'; # Time stamps saved in field x (row vector)
7f103819617d ode15i.m, ode15s.m: transpose struct output for Matlab compatibility (bug #59416)
Rik <rik@octave.org>
parents: 28929
diff changeset
266 varargout{1}.y = y.'; # Results are saved in field y (row vector)
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
267 varargout{1}.solver = solver;
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
268 if (options.haveeventfunction)
29041
2190720bca3e ode15i.m, ode15s.m: Transpose event outputs when single struct output requested (bug #59416).
Rik <rik@octave.org>
parents: 29039
diff changeset
269 varargout{1}.xe = te.'; # Time info when an event occurred
2190720bca3e ode15i.m, ode15s.m: Transpose event outputs when single struct output requested (bug #59416).
Rik <rik@octave.org>
parents: 29039
diff changeset
270 varargout{1}.ye = ye.'; # Results when an event occurred
2190720bca3e ode15i.m, ode15s.m: Transpose event outputs when single struct output requested (bug #59416).
Rik <rik@octave.org>
parents: 29039
diff changeset
271 varargout{1}.ie = ie.'; # Index info which event occurred
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
272 endif
22938
a88ceac2aa53 Fix undefined return argument for more than 2 outputs from ode15i,ode15s.
Rik <rik@octave.org>
parents: 22935
diff changeset
273 elseif (nargout > 2)
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
274 varargout = cell (1,5);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
275 varargout{1} = t;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
276 varargout{2} = y;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
277 if (options.haveeventfunction)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
278 varargout{3} = te; # Time info when an event occurred
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
279 varargout{4} = ye; # Results when an event occurred
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
280 varargout{5} = ie; # Index info which event occurred
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
281 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
282 endif
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
283
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
284 endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
285
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
286
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
287 %!demo
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
288 %! ## Solve Robertson's equations with ode15i
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
289 %! fcn = @(t, y, yp) [-(yp(1) + 0.04*y(1) - 1e4*y(2)*y(3));
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
290 %! -(yp(2) - 0.04*y(1) + 1e4*y(2)*y(3) + 3e7*y(2)^2);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
291 %! y(1) + y(2) + y(3) - 1];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
292 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
293 %! opt = odeset ("RelTol", 1e-4, "AbsTol", [1e-8, 1e-14, 1e-6]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
294 %! y0 = [1; 0; 0];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
295 %! yp0 = [-1e-4; 1e-4; 0];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
296 %! tspan = [0 4*logspace(-6, 6)];
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
297 %!
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
298 %! [t, y] = ode15i (fcn, tspan, y0, yp0, opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
299 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
300 %! y(:,2) = 1e4 * y(:, 2);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
301 %! figure (2);
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
302 %! semilogx (t, y, "o");
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
303 %! xlabel ("time");
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
304 %! ylabel ("species concentration");
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
305 %! title ("Robertson DAE problem with a Conservation Law");
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
306 %! legend ("y1", "y2", "y3");
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
307
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
308 %!function res = rob (t, y, yp)
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
309 %! res =[-(yp(1) + 0.04*y(1) - 1e4*y(2)*y(3));
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
310 %! -(yp(2) - 0.04*y(1) + 1e4*y(2)*y(3) + 3e7*y(2)^2);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
311 %! y(1) + y(2) + y(3) - 1];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
312 %!endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
313 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
314 %!function ref = fref ()
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
315 %! ref = [100, 0.617234887614937, 0.000006153591397, 0.382758958793666];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
316 %!endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
317 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
318 %!function ref2 = fref2 ()
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
319 %! ref2 = [4e6 0 0 1];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
320 %!endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
321 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
322 %!function [DFDY, DFDYP] = jacfundense (t, y, yp)
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
323 %! DFDY = [-0.04, 1e4*y(3), 1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
324 %! 0.04, -1e4*y(3)-6e7*y(2), -1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
325 %! 1, 1, 1];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
326 %! DFDYP = [-1, 0, 0;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
327 %! 0, -1, 0;
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
328 %! 0, 0, 0];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
329 %!endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
330 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
331 %!function [DFDY, DFDYP] = jacfunsparse (t, y, yp)
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
332 %! DFDY = sparse ([-0.04, 1e4*y(3), 1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
333 %! 0.04, -1e4*y(3)-6e7*y(2), -1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
334 %! 1, 1, 1]);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
335 %! DFDYP = sparse ([-1, 0, 0;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
336 %! 0, -1, 0;
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
337 %! 0, 0, 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
338 %!endfunction
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
339 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
340 %!function [DFDY, DFDYP] = jacwrong (t, y, yp)
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
341 %! DFDY = [-0.04, 1e4*y(3);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
342 %! 0.04, -1e4*y(3)-6e7*y(2)];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
343 %! DFDYP = [-1, 0;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
344 %! 0, -1];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
345 %!endfunction
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
346 %!
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
347 %!function [DFDY, DFDYP, A] = jacwrong2 (t, y, yp)
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
348 %! DFDY = [-0.04, 1e4*y(3), 1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
349 %! 0.04, -1e4*y(3)-6e7*y(2), -1e4*y(2);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
350 %! 1, 1, 1];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
351 %! DFDYP = [-1, 0, 0;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
352 %! 0, -1, 0;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
353 %! 0, 0, 0];
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
354 %! A = DFDY;
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
355 %!endfunction
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
356 %!
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
357 %!function [val, isterminal, direction] = ff (t, y, yp)
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
358 %! isterminal = [0, 1];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
359 %! if (t < 1e1)
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
360 %! val = [-1, -2];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
361 %! else
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
362 %! val = [1, 3];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
363 %! endif
22910
23847979b91e maint: Strip trailing whitespace from source files.
John W. Eaton <jwe@octave.org>
parents: 22902
diff changeset
364 %!
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
365 %! direction = [1, 0];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
366 %!endfunction
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
367
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
368 ## anonymous function instead of real function
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
369 %!testif HAVE_SUNDIALS
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
370 %! ref = 0.049787079136413;
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
371 %! ff = @(t, u, udot) udot + 3 * u;
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
372 %! [t, y] = ode15i (ff, 0:1, 1, -3);
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
373 %! assert ([t(end), y(end)], [1, ref], 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
374
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
375 ## function passed as string
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
376 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
377 %! [t, y] = ode15i ("rob", [0, 100, 200], [1; 0; 0], [-1e-4; 1e-4; 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
378 %! assert ([t(2), y(2,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
379
27956
2310164737b3 fix many spelling errors (bug #57613)
John W. Eaton <jwe@octave.org>
parents: 26376
diff changeset
380 ## solve in intermediate step
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
381 %!testif HAVE_SUNDIALS
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
382 %! [t, y] = ode15i (@rob, [0, 100, 200], [1; 0; 0], [-1e-4; 1e-4; 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
383 %! assert ([t(2), y(2,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
384
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
385 ## numel(trange) = 2 final value
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
386 %!testif HAVE_SUNDIALS
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
387 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
388 %! assert ([t(end), y(end,:)], fref, 1e-5);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
389
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
390 ## With empty options
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
391 %!testif HAVE_SUNDIALS
28912
0de38a6ef693 maint: Use Octave convention of space after function name in scripts dir.
Rik <rik@octave.org>
parents: 28713
diff changeset
392 %! opt = odeset ();
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
393 %! [t, y] = ode15i (@rob, [0, 1e6, 2e6, 3e6, 4e6], [1; 0; 0],
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
394 %! [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
395 %! assert ([t(end), y(end,:)], fref2, 1e-3);
28912
0de38a6ef693 maint: Use Octave convention of space after function name in scripts dir.
Rik <rik@octave.org>
parents: 28713
diff changeset
396 %! opt = odeset ();
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
397
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
398 ## Without options
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
399 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
400 %! [t, y] = ode15i (@rob, [0, 1e6, 2e6, 3e6, 4e6], [1; 0; 0],[-1e-4; 1e-4; 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
401 %! assert ([t(end), y(end,:)], fref2, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
402
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
403 ## InitialStep option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
404 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
405 %! opt = odeset ("InitialStep", 1e-8);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
406 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
407 %! assert (t(2)-t(1), 1e-8, 1e-9);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
408
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
409 ## MaxStep option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
410 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
411 %! opt = odeset ("MaxStep", 1e-3);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
412 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
413 %! assert (t(5)-t(4), 1e-3, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
414
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
415 ## AbsTol scalar option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
416 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
417 %! opt = odeset ("AbsTol", 1e-8);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
418 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
419 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
420
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
421 ## AbsTol scalar and RelTol option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
422 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
423 %! opt = odeset ("AbsTol", 1e-8, "RelTol", 1e-6);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
424 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
425 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
426
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
427 ## AbsTol vector option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
428 %!testif HAVE_SUNDIALS
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
429 %! opt = odeset ("AbsTol", [1e-8, 1e-14, 1e-6]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
430 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
431 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
432
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
433 ## AbsTol vector and RelTol option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
434 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
435 %! opt = odeset ("AbsTol", [1e-8, 1e-14,1e-6], "RelTol", 1e-6);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
436 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4;1e-4;0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
437 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
438
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
439 ## RelTol option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
440 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
441 %! opt = odeset ("RelTol", 1e-6);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
442 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
443 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
444
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
445 ## Jacobian fcn dense
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
446 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
447 %! opt = odeset ("Jacobian", @jacfundense);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
448 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
449 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
450
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
451 ## Jacobian fcn dense as string
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
452 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
453 %! opt = odeset ("Jacobian", "jacfundense");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
454 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
455 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
456
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
457 ## Jacobian fcn sparse
26894
ee6300e77c92 Update detection of sundials in the build system (bug #52475).
Carlo de Falco <carlo.defalco@polimi.it>
parents: 26376
diff changeset
458 %!testif HAVE_SUNDIALS_SUNLINSOL_KLU
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
459 %! opt = odeset ("Jacobian", @jacfunsparse, "AbsTol", 1e-7, "RelTol", 1e-7);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
460 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
461 %! assert ([t(end), y(end,:)], fref, 1e-3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
462
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
463 ## Solve in backward direction starting at t=100
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
464 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
465 %! YPref = [-0.001135972751027; -0.000000027483627; 0.001136000234654];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
466 %! Yref = [0.617234887614937, 0.000006153591397, 0.382758958793666];
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
467 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
468 %! [t2, y2] = ode15i (@rob, [100, 0], Yref', YPref);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
469 %! assert ([t2(end), y2(end,:)], [0, 1, 0, 0], 2e-2);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
470
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
471 ## Solve in backward direction with MaxStep option
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
472 #%!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
473 %! YPref = [-0.001135972751027; -0.000000027483627; 0.001136000234654];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
474 %! Yref = [0.617234887614937, 0.000006153591397, 0.382758958793666];
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
475 %! opt = odeset ("MaxStep", 1e-2);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
476 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
477 %! [t2, y2] = ode15i (@rob, [100, 0], Yref', YPref, opt);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
478 %! assert ([t2(end), y2(end,:)], [0, 1, 0, 0], 2e-2);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
479 %! assert (t2(9)-t2(10), 1e-2, 1e-2);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
480
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
481 ## Solve in backward direction starting with intermediate step
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
482 #%!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
483 %! YPref = [-0.001135972751027; -0.000000027483627; 0.001136000234654];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
484 %! Yref = [0.617234887614937, 0.000006153591397, 0.382758958793666];
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
485 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
486 %! [t2, y2] = ode15i (@rob, [100, 5, 0], Yref', YPref);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
487 %! assert ([t2(end), y2(end,:)], [0, 1, 0, 0], 2e-2);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
488
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
489 ## Refine
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
490 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
491 %! opt = odeset ("Refine", 3);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
492 %! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
493 %! [t2, y2] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
494 %! assert (numel (t2), numel (t) * 3, 3);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
495
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
496 ## Refine ignored if numel (trange) > 2
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
497 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
498 %! opt = odeset ("Refine", 3);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
499 %! [t, y] = ode15i (@rob, [0, 10, 100], [1; 0; 0], [-1e-4; 1e-4; 0]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
500 %! [t2, y2] = ode15i (@rob, [0, 10, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
501 %! assert (numel (t2), numel (t));
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
502
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
503 ## Events option add further elements in sol
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
504 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
505 %! opt = odeset ("Events", @ff);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
506 %! sol = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
507 %! assert (isfield (sol, "ie"));
29042
d25cd81b0577 ode15i.m, ode15s.m: Transpose event outputs in BISTs (bug #59416).
Markus Mützel <markus.muetzel@gmx.de>
parents: 29041
diff changeset
508 %! assert (sol.ie, [1, 2]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
509 %! assert (isfield (sol, "xe"));
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
510 %! assert (isfield (sol, "ye"));
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
511 %! assert (sol.x(end), 10, 1);
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
512
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
513 ## Events option, five output arguments
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
514 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
515 %! opt = odeset ("Events", @ff);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
516 %! [t, y, te, ye, ie] = ode15i (@rob, [0, 100], [1; 0; 0],
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
517 %! [-1e-4; 1e-4; 0], opt);
29039
1aa69571a313 Use 1-based indexing for "ie" variable in ode15i/s (bug #59063).
Rik <rik@octave.org>
parents: 29025
diff changeset
518 %! assert (t(end), 10, 1);
1aa69571a313 Use 1-based indexing for "ie" variable in ode15i/s (bug #59063).
Rik <rik@octave.org>
parents: 29025
diff changeset
519 %! assert (te, [10; 10], 0.2);
1aa69571a313 Use 1-based indexing for "ie" variable in ode15i/s (bug #59063).
Rik <rik@octave.org>
parents: 29025
diff changeset
520 %! assert (ie, [1; 2]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
521
24008
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
522 ## Initial solutions as row vectors
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
523 %!testif HAVE_SUNDIALS
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
524 %! A = eye (2);
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
525 %! [tout, yout] = ode15i (@(t, y, yp) A * y - A * yp, ...
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
526 %! [0, 1], [1, 1], [1, 1]);
28929
9e43deb9bfc3 maint: Use semicolon after assert statement inside %!test blocks.
Rik <rik@octave.org>
parents: 28912
diff changeset
527 %! assert (size (yout), [20, 2]);
24008
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
528
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
529 %!testif HAVE_SUNDIALS
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
530 %! A = eye (2);
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
531 %! [tout, yout] = ode15i (@(t, y, yp) A * y - A * yp, ...
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
532 %! [0, 1], [1, 1], [1; 1]);
28929
9e43deb9bfc3 maint: Use semicolon after assert statement inside %!test blocks.
Rik <rik@octave.org>
parents: 28912
diff changeset
533 %! assert (size (yout), [20, 2]);
24008
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
534
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
535 ## Jacobian fcn wrong dimension
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
536 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
537 %! opt = odeset ("Jacobian", @jacwrong);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
538 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
539 %! '"Jacobian" function must evaluate to a real square matrix');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
540
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
541 ## Jacobian cell dense wrong dimension
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
542 %!testif HAVE_SUNDIALS
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
543 %! DFDY = [-0.04, 1;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
544 %! 0.04, 1];
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
545 %! DFDYP = [-1, 0, 0;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
546 %! 0, -1, 0;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
547 %! 0, 0, 0];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
548 %! opt = odeset ("Jacobian", {DFDY, DFDYP});
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
549 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
550 %! '"Jacobian" matrices must be real square matrices');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
551
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
552 ## Jacobian cell sparse wrong dimension
26894
ee6300e77c92 Update detection of sundials in the build system (bug #52475).
Carlo de Falco <carlo.defalco@polimi.it>
parents: 26376
diff changeset
553 %!testif HAVE_SUNDIALS_SUNLINSOL_KLU
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
554 %! DFDY = sparse ([-0.04, 1;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
555 %! 0.04, 1]);
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
556 %! DFDYP = sparse ([-1, 0, 0;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
557 %! 0, -1, 0;
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
558 %! 0, 0, 0]);
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
559 %! opt = odeset ("Jacobian", {DFDY, DFDYP});
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
560 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
561 %! '"Jacobian" matrices must be real square matrices');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
562
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
563 ## Jacobian cell wrong number of matrices
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
564 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
565 %! A = [1 2 3; 4 5 6; 7 8 9];
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
566 %! opt = odeset ("Jacobian", {A,A,A});
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
567 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
568 %! 'invalid value assigned to field "Jacobian"');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
569
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
570 ## Jacobian single matrix
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
571 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
572 %! opt = odeset ("Jacobian", [1 2 3; 4 5 6; 7 8 9]);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
573 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
574 %! '"Jacobian" field must be a function handle or 2-element cell array of square matrices');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
575
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
576 ## Jacobian single matrix wrong dimension
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
577 %!testif HAVE_SUNDIALS
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
578 %! opt = odeset ("Jacobian", [1 2 3; 4 5 6]);
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
579 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
580 %! '"Jacobian" field must be a function handle or 2-element cell array of square matrices');
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
581
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
582 ## Jacobian strange field
28046
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
583 %!testif HAVE_SUNDIALS
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
584 %! opt = odeset ("Jacobian", "_5yVNhWVJWJn47RKnzxPsyb_");
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
585 %! fail ("[t, y] = ode15i (@rob, [0, 4e6], [1; 0; 0], [-1e-4; 1e-4; 0], opt)",
5664362da646 ode15i.m: Adapt BIST tests to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28045
diff changeset
586 %! '"Jacobian" function "_5yVNhWVJWJn47RKnzxPsyb_" not found');
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
587
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
588 %!function ydot = fcn (t, y, yp)
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
589 %! ydot = [y - yp];
22901
4c56f3ffec04 Add functions ode15i and ode15s
Francesco Faccio <francesco.faccio@mail.polimi.it>
parents:
diff changeset
590 %!endfunction
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
591
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
592 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
593 %! fail ("ode15i ()", "Invalid call to ode15i");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
594
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
595 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
596 %! fail ("ode15i (1)", "Invalid call to ode15i");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
597
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
598 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
599 %! fail ("ode15i (1, 1)", "Invalid call to ode15i");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
600
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
601 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
602 %! fail ("ode15i (1, 1, 1)", "Invalid call to ode15i");
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
603
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
604 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
605 %! fail ("ode15i (1, 1, 1, 1)", "ode15i: fcn must be of class:");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
606
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
607 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
608 %! fail ("ode15i (1, 1, 1, 1, 1)", "ode15i: fcn must be of class:");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
609
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
610 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
611 %! fail ("ode15i (1, 1, 1, 1, 1, 1)", "ode15i: fcn must be of class:");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
612
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
613 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
614 %! fail ("ode15i (@fcn, 1, 1, 1)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
615 %! "ode15i: invalid value assigned to field 'trange'");
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
616
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
617 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
618 %! fail ("ode15i (@fcn, [1, 1], 1, 1)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
619 %! "ode15i: invalid value assigned to field 'trange'");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
620
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
621 %!testif HAVE_SUNDIALS
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
622 %! fail ("ode15i (@fcn, [1, 2], 1, [1, 2])",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
623 %! "ode15i: y0 must have 2 elements");
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
624
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
625 %!testif HAVE_SUNDIALS
25712
5625b2237a4d * ode15i.m: In tests, use unlikely symbol name instead of "foo".
John W. Eaton <jwe@octave.org>
parents: 25113
diff changeset
626 %! opt = odeset ("RelTol", "_5yVNhWVJWJn47RKnzxPsyb_");
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
627 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
628 %! "ode15i: RelTol must be of class:");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
629
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
630 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
631 %! opt = odeset ("RelTol", [1, 2]);
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
632 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
633 %! "ode15i: RelTol must be scalar");
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
634
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
635 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
636 %! opt = odeset ("RelTol", -2);
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
637 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
638 %! "ode15i: RelTol must be positive");
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
639
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
640 %!testif HAVE_SUNDIALS
25712
5625b2237a4d * ode15i.m: In tests, use unlikely symbol name instead of "foo".
John W. Eaton <jwe@octave.org>
parents: 25113
diff changeset
641 %! opt = odeset ("AbsTol", "_5yVNhWVJWJn47RKnzxPsyb_");
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
642 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
643 %! "ode15i: AbsTol must be of class:");
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
644
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
645 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
646 %! opt = odeset ("AbsTol", -1);
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
647 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
648 %! "ode15i: AbsTol must be positive");
22928
dec22bceafa2 use testif HAVE_SUNDIALS for ode15 tests
John W. Eaton <jwe@octave.org>
parents: 22910
diff changeset
649
22931
8133da976602 * ode15i.m: Make error tests conditional on HAVE_SUNDIALS.
John W. Eaton <jwe@octave.org>
parents: 22928
diff changeset
650 %!testif HAVE_SUNDIALS
22933
c3428bb9aca9 ode15i.m, ode15s.m: Follow Octave coding conventions.
Rik <rik@octave.org>
parents: 22931
diff changeset
651 %! opt = odeset ("AbsTol", [1, 1, 1]);
30893
e1788b1a315f maint: Use "fcn" as preferred abbreviation for "function" in m-files.
Rik <rik@octave.org>
parents: 30564
diff changeset
652 %! fail ("[t, y] = ode15i (@fcn, [0, 2], 2, 2, opt)",
28047
bd7d82fc65ba ode15i.m: Adapt another BIST test to new input validation in cset 13dba3c069f8.
Rik <rik@octave.org>
parents: 28046
diff changeset
653 %! 'ode15i: invalid value assigned to field "AbsTol"');
24008
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
654
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
655 %!testif HAVE_SUNDIALS
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
656 %! A = zeros (2);
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
657 %! fail ("ode15i (@(t, y, yp) A * y - A * yp, [0, 1], eye (2), [1, 1])",
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
658 %! "ode15i: Y0 must be a numeric vector");
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
659
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
660 %!testif HAVE_SUNDIALS
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
661 %! A = zeros (2);
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
662 %! fail ("ode15i (@(t, y, yp) A * y - A * yp, [0, 1], [1, 1], eye (2))",
6e7bb85e32b8 Allow ode15s and ode15i to work with row initial vectors (bug #50192).
Marco Caliari <marco.caliari@univr.it>
parents: 24007
diff changeset
663 %! "ode15i: YP0 must be a numeric vector");