Mercurial > octave
annotate libinterp/dldfcn/colamd.cc @ 21109:bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
In liboctave, use the same error text as err_disabled_feature, but
call error_handler directly because err_disabled_feature is in libinterp.
* errwarn.cc (err_disabled_feature): Don't print leading "%s:" if calling
function is "".
* errwarn.cc (warn_disabled_feature): New function. Same msg as
err_disabled_feature but uses warning rather than error.
* errwarn.h (warn_disabled_feature): prototype for new function.
* file-io.cc, gl-render.cc, gl2ps-renderer.cc, load-save.cc, ls-mat5.cc,
oct-hdf5-types.cc, pt-jit.cc, syscalls.cc, sysdep.cc, toplev.cc,
__delaunayn__.cc, __eigs__.cc, __fltk_uigetfile__.cc, __init_fltk__.cc,
__osmesa_print__.cc, __voronoi__.cc, amd.cc, ccolamd.cc, colamd.cc,
convhulln.cc, dmperm.cc, fftw.cc, symbfact.cc: Replace calls to error about
missing feature with calls to err_disabled_feature. Replace calls to warning
about missing feature with calls to warn_disabled_feature.
* CSparse.cc, dSparse.cc, SparseCmplxLU.cc, SparseCmplxQR.cc, SparseQR.cc,
SparsedbleLU.cc, sparse-base-chol.cc, sparse-dmsolve.cc, oct-shlib.cc:
Use same text of message from err_disabled_feature but call
(*current_liboctave_error_handler) or
(*current_liboctave_warning_with_id_handler).
author | Rik <rik@octave.org> |
---|---|
date | Tue, 19 Jan 2016 12:44:54 -0800 |
parents | 77f5591878bf |
children | 3d0d84305600 |
rev | line source |
---|---|
5164 | 1 /* |
2 | |
19697
4197fc428c7d
maint: Update copyright notices for 2015.
John W. Eaton <jwe@octave.org>
parents:
19040
diff
changeset
|
3 Copyright (C) 2004-2015 David Bateman |
11523 | 4 Copyright (C) 1998-2004 Andy Adler |
7016 | 5 |
6 This file is part of Octave. | |
5164 | 7 |
8 Octave is free software; you can redistribute it and/or modify it | |
9 under the terms of the GNU General Public License as published by the | |
7016 | 10 Free Software Foundation; either version 3 of the License, or (at your |
11 option) any later version. | |
5164 | 12 |
13 Octave is distributed in the hope that it will be useful, but WITHOUT | |
14 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or | |
15 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License | |
16 for more details. | |
17 | |
18 You should have received a copy of the GNU General Public License | |
7016 | 19 along with Octave; see the file COPYING. If not, see |
20 <http://www.gnu.org/licenses/>. | |
5164 | 21 |
22 */ | |
23 | |
24 // This is the octave interface to colamd, which bore the copyright given | |
25 // in the help of the functions. | |
26 | |
27 #ifdef HAVE_CONFIG_H | |
28 #include <config.h> | |
29 #endif | |
30 | |
31 #include <cstdlib> | |
32 | |
33 #include <string> | |
34 #include <vector> | |
35 | |
36 #include "ov.h" | |
37 #include "defun-dld.h" | |
38 #include "pager.h" | |
39 #include "ov-re-mat.h" | |
40 | |
41 #include "ov-re-sparse.h" | |
42 #include "ov-cx-sparse.h" | |
43 | |
5451 | 44 #include "oct-sparse.h" |
8377
25bc2d31e1bf
improve OCTAVE_LOCAL_BUFFER
Jaroslav Hajek <highegg@gmail.com>
parents:
7924
diff
changeset
|
45 #include "oct-locbuf.h" |
5164 | 46 |
16313
6aafe87a3144
use int64_t for idx type if --enable-64
John W. Eaton <jwe@octave.org>
parents:
15195
diff
changeset
|
47 #ifdef USE_64_BIT_IDX_T |
21109
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
48 # define COLAMD_NAME(name) colamd_l ## name |
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
49 # define SYMAMD_NAME(name) symamd_l ## name |
5440 | 50 #else |
21109
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
51 # define COLAMD_NAME(name) colamd ## name |
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
52 # define SYMAMD_NAME(name) symamd ## name |
5440 | 53 #endif |
54 | |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
55 // The symmetric column elimination tree code take from the Davis LDL code. |
5164 | 56 // Copyright given elsewhere in this file. |
7924 | 57 static void |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
58 symetree (const octave_idx_type *ridx, const octave_idx_type *cidx, |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
59 octave_idx_type *Parent, octave_idx_type *P, octave_idx_type n) |
5164 | 60 { |
5440 | 61 OCTAVE_LOCAL_BUFFER (octave_idx_type, Flag, n); |
62 OCTAVE_LOCAL_BUFFER (octave_idx_type, Pinv, (P ? n : 0)); | |
5164 | 63 if (P) |
64 // If P is present then compute Pinv, the inverse of P | |
5440 | 65 for (octave_idx_type k = 0 ; k < n ; k++) |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
66 Pinv[P[k]] = k ; |
5164 | 67 |
5440 | 68 for (octave_idx_type k = 0 ; k < n ; k++) |
5164 | 69 { |
70 // L(k,:) pattern: all nodes reachable in etree from nz in A(0:k-1,k) | |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
71 Parent[k] = n ; // parent of k is not yet known |
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
72 Flag[k] = k ; // mark node k as visited |
17787
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
73 octave_idx_type kk = (P) ? P[k] // kth original, or permuted, column |
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
74 : (k) ; |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
75 octave_idx_type p2 = cidx[kk+1] ; |
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
76 for (octave_idx_type p = cidx[kk] ; p < p2 ; p++) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
77 { |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
78 // A (i,k) is nonzero (original or permuted A) |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
79 octave_idx_type i = (Pinv) ? (Pinv[ridx[p]]) : (ridx[p]) ; |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
80 if (i < k) |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
81 { |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
82 // follow path from i to root of etree, stop at flagged node |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
83 for ( ; Flag[i] != k ; i = Parent[i]) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
84 { |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
85 // find parent of i if not yet determined |
15020
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
86 if (Parent[i] == n) |
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
87 Parent[i] = k ; |
560317fd5977
maint: Cuddle open bracket used for indexing C++ arrays in source code.
Rik <rik@octave.org>
parents:
14854
diff
changeset
|
88 Flag[i] = k ; // mark i as visited |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
89 } |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
90 } |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
91 } |
5164 | 92 } |
93 } | |
94 | |
95 // The elimination tree post-ordering code below is taken from SuperLU | |
7924 | 96 static inline octave_idx_type |
97 make_set (octave_idx_type i, octave_idx_type *pp) | |
5164 | 98 { |
99 pp[i] = i; | |
100 return i; | |
101 } | |
102 | |
7924 | 103 static inline octave_idx_type |
104 link (octave_idx_type s, octave_idx_type t, octave_idx_type *pp) | |
5164 | 105 { |
106 pp[s] = t; | |
107 return t; | |
108 } | |
109 | |
7924 | 110 static inline octave_idx_type |
111 find (octave_idx_type i, octave_idx_type *pp) | |
5164 | 112 { |
5440 | 113 register octave_idx_type p, gp; |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
114 |
5164 | 115 p = pp[i]; |
116 gp = pp[p]; | |
7924 | 117 |
118 while (gp != p) | |
119 { | |
120 pp[i] = gp; | |
121 i = gp; | |
122 p = pp[i]; | |
123 gp = pp[p]; | |
124 } | |
125 | |
126 return p; | |
5164 | 127 } |
128 | |
7924 | 129 static octave_idx_type |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
130 etdfs (octave_idx_type v, octave_idx_type *first_kid, |
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
131 octave_idx_type *next_kid, octave_idx_type *post, |
7924 | 132 octave_idx_type postnum) |
5164 | 133 { |
7924 | 134 for (octave_idx_type w = first_kid[v]; w != -1; w = next_kid[w]) |
5164 | 135 postnum = etdfs (w, first_kid, next_kid, post, postnum); |
7924 | 136 |
5164 | 137 post[postnum++] = v; |
138 | |
139 return postnum; | |
140 } | |
141 | |
7924 | 142 static void |
143 tree_postorder (octave_idx_type n, octave_idx_type *parent, | |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
144 octave_idx_type *post) |
5164 | 145 { |
146 // Allocate storage for working arrays and results | |
5440 | 147 OCTAVE_LOCAL_BUFFER (octave_idx_type, first_kid, n+1); |
148 OCTAVE_LOCAL_BUFFER (octave_idx_type, next_kid, n+1); | |
5164 | 149 |
150 // Set up structure describing children | |
7924 | 151 for (octave_idx_type v = 0; v <= n; first_kid[v++] = -1) |
20946 | 152 ; // do nothing |
7924 | 153 |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
154 for (octave_idx_type v = n-1; v >= 0; v--) |
5164 | 155 { |
5440 | 156 octave_idx_type dad = parent[v]; |
5164 | 157 next_kid[v] = first_kid[dad]; |
158 first_kid[dad] = v; | |
159 } | |
160 | |
161 // Depth-first search from dummy root vertex #n | |
162 etdfs (n, first_kid, next_kid, post, 0); | |
163 } | |
164 | |
7924 | 165 static void |
166 coletree (const octave_idx_type *ridx, const octave_idx_type *colbeg, | |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
167 octave_idx_type *colend, octave_idx_type *parent, |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
168 octave_idx_type nr, octave_idx_type nc) |
5164 | 169 { |
5440 | 170 OCTAVE_LOCAL_BUFFER (octave_idx_type, root, nc); |
171 OCTAVE_LOCAL_BUFFER (octave_idx_type, pp, nc); | |
172 OCTAVE_LOCAL_BUFFER (octave_idx_type, firstcol, nr); | |
5164 | 173 |
174 // Compute firstcol[row] = first nonzero column in row | |
7924 | 175 for (octave_idx_type row = 0; row < nr; firstcol[row++] = nc) |
20946 | 176 ; // do nothing |
7924 | 177 |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
178 for (octave_idx_type col = 0; col < nc; col++) |
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
179 for (octave_idx_type p = colbeg[col]; p < colend[col]; p++) |
5164 | 180 { |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
181 octave_idx_type row = ridx[p]; |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
182 if (firstcol[row] > col) |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
183 firstcol[row] = col; |
5164 | 184 } |
185 | |
186 // Compute etree by Liu's algorithm for symmetric matrices, | |
187 // except use (firstcol[r],c) in place of an edge (r,c) of A. | |
188 // Thus each row clique in A'*A is replaced by a star | |
189 // centered at its first vertex, which has the same fill. | |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
190 for (octave_idx_type col = 0; col < nc; col++) |
5164 | 191 { |
5440 | 192 octave_idx_type cset = make_set (col, pp); |
5164 | 193 root[cset] = col; |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
194 parent[col] = nc; |
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
195 for (octave_idx_type p = colbeg[col]; p < colend[col]; p++) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
196 { |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
197 octave_idx_type row = firstcol[ridx[p]]; |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
198 if (row >= col) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
199 continue; |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
200 octave_idx_type rset = find (row, pp); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
201 octave_idx_type rroot = root[rset]; |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
202 if (rroot != col) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
203 { |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
204 parent[rroot] = col; |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
205 cset = link (cset, rset, pp); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
206 root[cset] = col; |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
207 } |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
208 } |
5164 | 209 } |
210 } | |
211 | |
212 DEFUN_DLD (colamd, args, nargout, | |
17787
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
213 "-*- texinfo -*-\n\ |
20853
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
214 @deftypefn {} {@var{p} =} colamd (@var{S})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
215 @deftypefnx {} {@var{p} =} colamd (@var{S}, @var{knobs})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
216 @deftypefnx {} {[@var{p}, @var{stats}] =} colamd (@var{S})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
217 @deftypefnx {} {[@var{p}, @var{stats}] =} colamd (@var{S}, @var{knobs})\n\ |
5164 | 218 \n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
219 Compute the column approximate minimum degree permutation.\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
220 \n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
221 @code{@var{p} = colamd (@var{S})} returns the column approximate minimum\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
222 degree permutation vector for the sparse matrix @var{S}. For a\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
223 non-symmetric matrix @var{S}, @code{@var{S}(:,@var{p})} tends to have\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
224 sparser LU@tie{}factors than @var{S}. The Cholesky@tie{}factorization of\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
225 @code{@var{S}(:,@var{p})' * @var{S}(:,@var{p})} also tends to be sparser\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
226 than that of @code{@var{S}' * @var{S}}.\n\ |
5164 | 227 \n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
228 @var{knobs} is an optional one- to three-element input vector. If @var{S} is\n\ |
10846
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
229 m-by-n, then rows with more than @code{max(16,@var{knobs}(1)*sqrt(n))}\n\ |
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
230 entries are ignored. Columns with more than\n\ |
14854
5ae9f0f77635
maint: Use Octave coding conventions for coddling parenthis is DLD-FUNCTIONS directory
Rik <octave@nomad.inbox5.com>
parents:
14361
diff
changeset
|
231 @code{max (16,@var{knobs}(2)*sqrt(min(m,n)))} entries are removed prior to\n\ |
10846
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
232 ordering, and ordered last in the output permutation @var{p}. Only\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
233 completely dense rows or columns are removed if @code{@var{knobs}(1)} and\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
234 @code{@var{knobs}(2)} are < 0, respectively. If @code{@var{knobs}(3)} is\n\ |
10846
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
235 nonzero, @var{stats} and @var{knobs} are printed. The default is\n\ |
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
236 @code{@var{knobs} = [10 10 0]}. Note that @var{knobs} differs from earlier\n\ |
12575
d0b799dafede
Grammarcheck files for 3.4.1 release.
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
237 versions of colamd.\n\ |
5164 | 238 \n\ |
239 @var{stats} is an optional 20-element output vector that provides data\n\ | |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
240 about the ordering and the validity of the input matrix @var{S}. Ordering\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
241 statistics are in @code{@var{stats}(1:3)}. @code{@var{stats}(1)} and\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
242 @code{@var{stats}(2)} are the number of dense or empty rows and columns\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
243 ignored by @sc{colamd} and @code{@var{stats}(3)} is the number of garbage\n\ |
10840 | 244 collections performed on the internal data structure used by @sc{colamd}\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
245 (roughly of size @code{2.2 * nnz(@var{S}) + 4 * @var{m} + 7 * @var{n}}\n\ |
5164 | 246 integers).\n\ |
247 \n\ | |
248 Octave built-in functions are intended to generate valid sparse matrices,\n\ | |
249 with no duplicate entries, with ascending row indices of the nonzeros\n\ | |
250 in each column, with a non-negative number of entries in each column (!)\n\ | |
10840 | 251 and so on. If a matrix is invalid, then @sc{colamd} may or may not be able\n\ |
5164 | 252 to continue. If there are duplicate entries (a row index appears two or\n\ |
253 more times in the same column) or if the row indices in a column are out\n\ | |
10840 | 254 of order, then @sc{colamd} can correct these errors by ignoring the duplicate\n\ |
5164 | 255 entries and sorting each column of its internal copy of the matrix\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
256 @var{S} (the input matrix @var{S} is not repaired, however). If a matrix\n\ |
10846
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
257 is invalid in other ways then @sc{colamd} cannot continue, an error message\n\ |
a4f482e66b65
Grammarcheck more of the documentation.
Rik <octave@nomad.inbox5.com>
parents:
10840
diff
changeset
|
258 is printed, and no output arguments (@var{p} or @var{stats}) are returned.\n\ |
10840 | 259 @sc{colamd} is thus a simple way to check a sparse matrix to see if it's\n\ |
5164 | 260 valid.\n\ |
261 \n\ | |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
262 @code{@var{stats}(4:7)} provide information if @sc{colamd} was able to\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
263 continue. The matrix is OK if @code{@var{stats}(4)} is zero, or 1 if\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
264 invalid. @code{@var{stats}(5)} is the rightmost column index that is\n\ |
5164 | 265 unsorted or contains duplicate entries, or zero if no such column exists.\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
266 @code{@var{stats}(6)} is the last seen duplicate or out-of-order row\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
267 index in the column index given by @code{@var{stats}(5)}, or zero if no\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
268 such row index exists. @code{@var{stats}(7)} is the number of duplicate\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
269 or out-of-order row indices. @code{@var{stats}(8:20)} is always zero in\n\ |
10840 | 270 the current version of @sc{colamd} (reserved for future use).\n\ |
5164 | 271 \n\ |
272 The ordering is followed by a column elimination tree post-ordering.\n\ | |
273 \n\ | |
19040
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
274 The authors of the code itself are @nospell{Stefan I. Larimore} and\n\ |
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
275 @nospell{Timothy A. Davis @email{davis@@cise.ufl.edu}}, University of Florida. The algorithm was developed in collaboration with @nospell{John Gilbert},\n\ |
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
276 Xerox PARC, and @nospell{Esmond Ng}, Oak Ridge National Laboratory. (see\n\ |
5164 | 277 @url{http://www.cise.ufl.edu/research/sparse/colamd})\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
278 @seealso{colperm, symamd, ccolamd}\n\ |
5642 | 279 @end deftypefn") |
5164 | 280 { |
5451 | 281 #ifdef HAVE_COLAMD |
5164 | 282 int nargin = args.length (); |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
283 |
20909
03e4ddd49396
omit unnecessary nargout checks
John W. Eaton <jwe@octave.org>
parents:
20898
diff
changeset
|
284 if (nargin < 1 || nargin > 2) |
5823 | 285 print_usage (); |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
286 |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
287 octave_value_list retval (nargout == 2 ? 2 : 1); |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
288 int spumoni = 0; |
20862
ac1f8c640d8f
2015 Code Sprint: colamd.cc: use ovl().
Rik <rik@octave.org>
parents:
20853
diff
changeset
|
289 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
290 // Get knobs |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
291 OCTAVE_LOCAL_BUFFER (double, knobs, COLAMD_KNOBS); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
292 COLAMD_NAME (_set_defaults) (knobs); |
5164 | 293 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
294 // Check for user-passed knobs |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
295 if (nargin == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
296 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
297 NDArray User_knobs = args(1).array_value (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
298 int nel_User_knobs = User_knobs.numel (); |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
299 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
300 if (nel_User_knobs > 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
301 knobs[COLAMD_DENSE_ROW] = User_knobs(0); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
302 if (nel_User_knobs > 1) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
303 knobs[COLAMD_DENSE_COL] = User_knobs(1) ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
304 if (nel_User_knobs > 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
305 spumoni = static_cast<int> (User_knobs(2)); |
5440 | 306 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
307 // print knob settings if spumoni is set |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
308 if (spumoni) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
309 { |
5164 | 310 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
311 octave_stdout << "\ncolamd version " << COLAMD_MAIN_VERSION |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
312 << "." << COLAMD_SUB_VERSION |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
313 << ", " << COLAMD_DATE << ":\n"; |
5440 | 314 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
315 if (knobs[COLAMD_DENSE_ROW] >= 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
316 octave_stdout << "knobs(1): " << User_knobs (0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
317 << ", rows with > max (16," |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
318 << knobs[COLAMD_DENSE_ROW] << "*sqrt (size(A,2)))" |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
319 << " entries removed\n"; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
320 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
321 octave_stdout << "knobs(1): " << User_knobs (0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
322 << ", only completely dense rows removed\n"; |
5440 | 323 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
324 if (knobs[COLAMD_DENSE_COL] >= 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
325 octave_stdout << "knobs(2): " << User_knobs (1) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
326 << ", cols with > max (16," |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
327 << knobs[COLAMD_DENSE_COL] << "*sqrt (size(A)))" |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
328 << " entries removed\n"; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
329 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
330 octave_stdout << "knobs(2): " << User_knobs (1) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
331 << ", only completely dense columns removed\n"; |
5164 | 332 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
333 octave_stdout << "knobs(3): " << User_knobs (2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
334 << ", statistics and knobs printed\n"; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
335 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
336 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
337 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
338 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
339 octave_idx_type n_row, n_col, nnz; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
340 octave_idx_type *ridx, *cidx; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
341 SparseComplexMatrix scm; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
342 SparseMatrix sm; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
343 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
344 if (args(0).is_sparse_type ()) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
345 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
346 if (args(0).is_complex_type ()) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
347 { |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
348 scm = args(0). sparse_complex_matrix_value (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
349 n_row = scm.rows (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
350 n_col = scm.cols (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
351 nnz = scm.nnz (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
352 ridx = scm.xridx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
353 cidx = scm.xcidx (); |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
354 } |
5164 | 355 else |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
356 { |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
357 sm = args(0).sparse_matrix_value (); |
5164 | 358 |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
359 n_row = sm.rows (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
360 n_col = sm.cols (); |
10527
b4d2080b6df7
Replace nzmax by nnz as needed
David Bateman <dbateman@free.fr>
parents:
10282
diff
changeset
|
361 nnz = sm.nnz (); |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
362 ridx = sm.xridx (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
363 cidx = sm.xcidx (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
364 } |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
365 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
366 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
367 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
368 if (args(0).is_complex_type ()) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
369 sm = SparseMatrix (real (args(0).complex_matrix_value ())); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
370 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
371 sm = SparseMatrix (args(0).matrix_value ()); |
5164 | 372 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
373 n_row = sm.rows (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
374 n_col = sm.cols (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
375 nnz = sm.nnz (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
376 ridx = sm.xridx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
377 cidx = sm.xcidx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
378 } |
5164 | 379 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
380 // Allocate workspace for colamd |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
381 OCTAVE_LOCAL_BUFFER (octave_idx_type, p, n_col+1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
382 for (octave_idx_type i = 0; i < n_col+1; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
383 p[i] = cidx[i]; |
5164 | 384 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
385 octave_idx_type Alen = COLAMD_NAME (_recommended) (nnz, n_row, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
386 OCTAVE_LOCAL_BUFFER (octave_idx_type, A, Alen); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
387 for (octave_idx_type i = 0; i < nnz; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
388 A[i] = ridx[i]; |
5164 | 389 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
390 // Order the columns (destroys A) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
391 OCTAVE_LOCAL_BUFFER (octave_idx_type, stats, COLAMD_STATS); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
392 if (! COLAMD_NAME () (n_row, n_col, Alen, A, p, knobs, stats)) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
393 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
394 COLAMD_NAME (_report) (stats) ; |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
395 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
396 error ("colamd: internal error!"); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
397 } |
5164 | 398 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
399 // column elimination tree post-ordering (reuse variables) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
400 OCTAVE_LOCAL_BUFFER (octave_idx_type, colbeg, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
401 OCTAVE_LOCAL_BUFFER (octave_idx_type, colend, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
402 OCTAVE_LOCAL_BUFFER (octave_idx_type, etree, n_col + 1); |
5164 | 403 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
404 for (octave_idx_type i = 0; i < n_col; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
405 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
406 colbeg[i] = cidx[p[i]]; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
407 colend[i] = cidx[p[i]+1]; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
408 } |
5164 | 409 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
410 coletree (ridx, colbeg, colend, etree, n_row, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
411 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
412 // Calculate the tree post-ordering |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
413 tree_postorder (n_col, etree, colbeg); |
5164 | 414 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
415 // return the permutation vector |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
416 NDArray out_perm (dim_vector (1, n_col)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
417 for (octave_idx_type i = 0; i < n_col; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
418 out_perm(i) = p[colbeg[i]] + 1; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
419 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
420 retval(0) = out_perm; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
421 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
422 // print stats if spumoni > 0 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
423 if (spumoni > 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
424 COLAMD_NAME (_report) (stats) ; |
5164 | 425 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
426 // Return the stats vector |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
427 if (nargout == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
428 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
429 NDArray out_stats (dim_vector (1, COLAMD_STATS)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
430 for (octave_idx_type i = 0 ; i < COLAMD_STATS ; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
431 out_stats(i) = stats[i] ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
432 retval(1) = out_stats; |
5164 | 433 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
434 // fix stats (5) and (6), for 1-based information on |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
435 // jumbled matrix. note that this correction doesn't |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
436 // occur if symamd returns FALSE |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
437 out_stats (COLAMD_INFO1) ++ ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
438 out_stats (COLAMD_INFO2) ++ ; |
5164 | 439 } |
440 | |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
441 return retval; |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
442 |
5451 | 443 #else |
21109
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
444 err_disabled_feature ("colamd", "COLAMD"); |
5451 | 445 #endif |
5164 | 446 } |
447 | |
448 DEFUN_DLD (symamd, args, nargout, | |
17787
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
449 "-*- texinfo -*-\n\ |
20853
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
450 @deftypefn {} {@var{p} =} symamd (@var{S})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
451 @deftypefnx {} {@var{p} =} symamd (@var{S}, @var{knobs})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
452 @deftypefnx {} {[@var{p}, @var{stats}] =} symamd (@var{S})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
453 @deftypefnx {} {[@var{p}, @var{stats}] =} symamd (@var{S}, @var{knobs})\n\ |
5164 | 454 \n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
455 For a symmetric positive definite matrix @var{S}, returns the permutation\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
456 vector p such that @code{@var{S}(@var{p}, @var{p})} tends to have a\n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
457 sparser Cholesky@tie{}factor than @var{S}.\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
458 \n\ |
20181
aa36fb998a4d
maint: Remove unnecessary whitespace at end of lines.
Rik <rik@octave.org>
parents:
20163
diff
changeset
|
459 Sometimes @code{symamd} works well for symmetric indefinite matrices too. \n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
460 The matrix @var{S} is assumed to be symmetric; only the strictly lower\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
461 triangular part is referenced. @var{S} must be square.\n\ |
5164 | 462 \n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
463 @var{knobs} is an optional one- to two-element input vector. If @var{S} is\n\ |
5440 | 464 n-by-n, then rows and columns with more than\n\ |
14854
5ae9f0f77635
maint: Use Octave coding conventions for coddling parenthis is DLD-FUNCTIONS directory
Rik <octave@nomad.inbox5.com>
parents:
14361
diff
changeset
|
465 @code{max (16,@var{knobs}(1)*sqrt(n))} entries are removed prior to ordering,\n\ |
9064
7c02ec148a3c
Check grammar on all .cc files
Rik <rdrider0-list@yahoo.com>
parents:
8920
diff
changeset
|
466 and ordered last in the output permutation @var{p}. No rows/columns are\n\ |
5440 | 467 removed if @code{@var{knobs}(1) < 0}. If @code{@var{knobs} (2)} is nonzero,\n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
468 @code{stats} and @var{knobs} are printed. The default is\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
469 @code{@var{knobs} = [10 0]}. Note that @var{knobs} differs from earlier\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
470 versions of @code{symamd}.\n\ |
5164 | 471 \n\ |
472 @var{stats} is an optional 20-element output vector that provides data\n\ | |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
473 about the ordering and the validity of the input matrix @var{S}. Ordering\n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
474 statistics are in @code{@var{stats}(1:3)}.\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
475 @code{@var{stats}(1) = @var{stats}(2)} is the number of dense or empty rows\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
476 and columns ignored by SYMAMD and @code{@var{stats}(3)} is the number of\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
477 garbage collections performed on the internal data structure used by SYMAMD\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
478 (roughly of size @code{8.4 * nnz (tril (@var{S}, -1)) + 9 * @var{n}}\n\ |
5164 | 479 integers).\n\ |
480 \n\ | |
481 Octave built-in functions are intended to generate valid sparse matrices,\n\ | |
482 with no duplicate entries, with ascending row indices of the nonzeros\n\ | |
483 in each column, with a non-negative number of entries in each column (!)\n\ | |
484 and so on. If a matrix is invalid, then SYMAMD may or may not be able\n\ | |
485 to continue. If there are duplicate entries (a row index appears two or\n\ | |
486 more times in the same column) or if the row indices in a column are out\n\ | |
487 of order, then SYMAMD can correct these errors by ignoring the duplicate\n\ | |
488 entries and sorting each column of its internal copy of the matrix S (the\n\ | |
489 input matrix S is not repaired, however). If a matrix is invalid in\n\ | |
490 other ways then SYMAMD cannot continue, an error message is printed, and\n\ | |
491 no output arguments (@var{p} or @var{stats}) are returned. SYMAMD is\n\ | |
492 thus a simple way to check a sparse matrix to see if it's valid.\n\ | |
493 \n\ | |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
494 @code{@var{stats}(4:7)} provide information if SYMAMD was able to\n\ |
9064
7c02ec148a3c
Check grammar on all .cc files
Rik <rdrider0-list@yahoo.com>
parents:
8920
diff
changeset
|
495 continue. The matrix is OK if @code{@var{stats} (4)} is zero, or 1\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
496 if invalid. @code{@var{stats}(5)} is the rightmost column index that\n\ |
5164 | 497 is unsorted or contains duplicate entries, or zero if no such column\n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
498 exists. @code{@var{stats}(6)} is the last seen duplicate or out-of-order\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
499 row index in the column index given by @code{@var{stats}(5)}, or zero\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
500 if no such row index exists. @code{@var{stats}(7)} is the number of\n\ |
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
501 duplicate or out-of-order row indices. @code{@var{stats}(8:20)} is\n\ |
5164 | 502 always zero in the current version of SYMAMD (reserved for future use).\n\ |
503 \n\ | |
504 The ordering is followed by a column elimination tree post-ordering.\n\ | |
505 \n\ | |
19040
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
506 The authors of the code itself are @nospell{Stefan I. Larimore} and\n\ |
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
507 @nospell{Timothy A. Davis @email{davis@@cise.ufl.edu}}, University of Florida. The algorithm was developed in collaboration with @nospell{John Gilbert},\n\ |
0850b5212619
doc: Add @nospell macro around proper names in documentation.
Rik <rik@octave.org>
parents:
17787
diff
changeset
|
508 Xerox PARC, and @nospell{Esmond Ng}, Oak Ridge National Laboratory. (see\n\ |
5164 | 509 @url{http://www.cise.ufl.edu/research/sparse/colamd})\n\ |
5642 | 510 @seealso{colperm, colamd}\n\ |
511 @end deftypefn") | |
5164 | 512 { |
5451 | 513 #ifdef HAVE_COLAMD |
514 | |
5164 | 515 int nargin = args.length (); |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
516 |
20909
03e4ddd49396
omit unnecessary nargout checks
John W. Eaton <jwe@octave.org>
parents:
20898
diff
changeset
|
517 if (nargin < 1 || nargin > 2) |
5823 | 518 print_usage (); |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
519 |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
520 octave_value_list retval (nargin == 2 ? 2 : 1); |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
521 int spumoni = 0; |
20862
ac1f8c640d8f
2015 Code Sprint: colamd.cc: use ovl().
Rik <rik@octave.org>
parents:
20853
diff
changeset
|
522 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
523 // Get knobs |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
524 OCTAVE_LOCAL_BUFFER (double, knobs, COLAMD_KNOBS); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
525 COLAMD_NAME (_set_defaults) (knobs); |
5164 | 526 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
527 // Check for user-passed knobs |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
528 if (nargin == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
529 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
530 NDArray User_knobs = args(1).array_value (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
531 int nel_User_knobs = User_knobs.numel (); |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
532 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
533 if (nel_User_knobs > 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
534 knobs[COLAMD_DENSE_ROW] = User_knobs(COLAMD_DENSE_ROW); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
535 if (nel_User_knobs > 1) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
536 spumoni = static_cast<int> (User_knobs (1)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
537 } |
11586
12df7854fa7c
strip trailing whitespace from source files
John W. Eaton <jwe@octave.org>
parents:
11553
diff
changeset
|
538 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
539 // print knob settings if spumoni is set |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
540 if (spumoni > 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
541 octave_stdout << "symamd: dense row/col fraction: " |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
542 << knobs[COLAMD_DENSE_ROW] << std::endl; |
5164 | 543 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
544 octave_idx_type n_row, n_col; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
545 octave_idx_type *ridx, *cidx; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
546 SparseMatrix sm; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
547 SparseComplexMatrix scm; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
548 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
549 if (args(0).is_sparse_type ()) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
550 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
551 if (args(0).is_complex_type ()) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
552 { |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
553 scm = args(0).sparse_complex_matrix_value (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
554 n_row = scm.rows (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
555 n_col = scm.cols (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
556 ridx = scm.xridx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
557 cidx = scm.xcidx (); |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
558 } |
5164 | 559 else |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
560 { |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
561 sm = args(0).sparse_matrix_value (); |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
562 n_row = sm.rows (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
563 n_col = sm.cols (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
564 ridx = sm.xridx (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
565 cidx = sm.xcidx (); |
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
566 } |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
567 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
568 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
569 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
570 if (args(0).is_complex_type ()) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
571 sm = SparseMatrix (real (args(0).complex_matrix_value ())); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
572 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
573 sm = SparseMatrix (args(0).matrix_value ()); |
5164 | 574 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
575 n_row = sm.rows (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
576 n_col = sm.cols (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
577 ridx = sm.xridx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
578 cidx = sm.xcidx (); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
579 } |
5164 | 580 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
581 if (n_row != n_col) |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
582 error ("symamd: matrix S must be square"); |
5164 | 583 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
584 // Allocate workspace for symamd |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
585 OCTAVE_LOCAL_BUFFER (octave_idx_type, perm, n_col+1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
586 OCTAVE_LOCAL_BUFFER (octave_idx_type, stats, COLAMD_STATS); |
20955
77f5591878bf
maint: Use '! expr' rather than '!expr' to conform to coding guidelines.
Rik <rik@octave.org>
parents:
20946
diff
changeset
|
587 if (! SYMAMD_NAME () (n_col, ridx, cidx, perm, |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
588 knobs, stats, &calloc, &free)) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
589 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
590 SYMAMD_NAME (_report) (stats) ; |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
591 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
592 error ("symamd: internal error!") ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
593 } |
5164 | 594 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
595 // column elimination tree post-ordering |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
596 OCTAVE_LOCAL_BUFFER (octave_idx_type, etree, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
597 symetree (ridx, cidx, etree, perm, n_col); |
5164 | 598 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
599 // Calculate the tree post-ordering |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
600 OCTAVE_LOCAL_BUFFER (octave_idx_type, post, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
601 tree_postorder (n_col, etree, post); |
5164 | 602 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
603 // return the permutation vector |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
604 NDArray out_perm (dim_vector (1, n_col)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
605 for (octave_idx_type i = 0; i < n_col; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
606 out_perm(i) = perm[post[i]] + 1; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
607 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
608 retval(0) = out_perm; |
5164 | 609 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
610 // print stats if spumoni > 0 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
611 if (spumoni > 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
612 SYMAMD_NAME (_report) (stats) ; |
5164 | 613 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
614 // Return the stats vector |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
615 if (nargout == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
616 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
617 NDArray out_stats (dim_vector (1, COLAMD_STATS)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
618 for (octave_idx_type i = 0 ; i < COLAMD_STATS ; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
619 out_stats(i) = stats[i] ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
620 retval(1) = out_stats; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
621 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
622 // fix stats (5) and (6), for 1-based information on |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
623 // jumbled matrix. note that this correction doesn't |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
624 // occur if symamd returns FALSE |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
625 out_stats (COLAMD_INFO1) ++ ; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
626 out_stats (COLAMD_INFO2) ++ ; |
5164 | 627 } |
628 | |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
629 return retval; |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
630 |
5451 | 631 #else |
21109
bd1752782e56
Use err_disabled_feature, warn_disabled_feature throughout code base.
Rik <rik@octave.org>
parents:
20955
diff
changeset
|
632 err_disabled_feature ("symamd", "COLAMD"); |
5451 | 633 #endif |
5164 | 634 } |
635 | |
636 DEFUN_DLD (etree, args, nargout, | |
17787
175b392e91fe
Use GNU style coding conventions for code in libinterp/
Rik <rik@octave.org>
parents:
17744
diff
changeset
|
637 "-*- texinfo -*-\n\ |
20853
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
638 @deftypefn {} {@var{p} =} etree (@var{S})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
639 @deftypefnx {} {@var{p} =} etree (@var{S}, @var{typ})\n\ |
1142cf6abc0d
2015 Code Sprint: remove class of function from docstring for all C++ files.
Rik <rik@octave.org>
parents:
20825
diff
changeset
|
640 @deftypefnx {} {[@var{p}, @var{q}] =} etree (@var{S}, @var{typ})\n\ |
5164 | 641 \n\ |
20163
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
642 Return the elimination tree for the matrix @var{S}.\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
643 \n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
644 By default @var{S} is assumed to be symmetric and the symmetric elimination\n\ |
075a5e2e1ba5
doc: Update more docstrings to have one sentence summary as first line.
Rik <rik@octave.org>
parents:
19697
diff
changeset
|
645 tree is returned. The argument @var{typ} controls whether a symmetric or\n\ |
9064
7c02ec148a3c
Check grammar on all .cc files
Rik <rdrider0-list@yahoo.com>
parents:
8920
diff
changeset
|
646 column elimination tree is returned. Valid values of @var{typ} are\n\ |
17281
bc924baa2c4e
doc: Add new @qcode macro for code samples which are quoted.
Rik <rik@octave.org>
parents:
16313
diff
changeset
|
647 @qcode{\"sym\"} or @qcode{\"col\"}, for symmetric or column elimination tree\n\ |
bc924baa2c4e
doc: Add new @qcode macro for code samples which are quoted.
Rik <rik@octave.org>
parents:
16313
diff
changeset
|
648 respectively.\n\ |
5164 | 649 \n\ |
11553
01f703952eff
Improve docstrings for functions in DLD-FUNCTIONS directory.
Rik <octave@nomad.inbox5.com>
parents:
11523
diff
changeset
|
650 Called with a second argument, @code{etree} also returns the postorder\n\ |
5164 | 651 permutations on the tree.\n\ |
652 @end deftypefn") | |
653 { | |
654 int nargin = args.length (); | |
655 | |
20909
03e4ddd49396
omit unnecessary nargout checks
John W. Eaton <jwe@octave.org>
parents:
20898
diff
changeset
|
656 if (nargin < 1 || nargin > 2) |
5823 | 657 print_usage (); |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
658 |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
659 octave_value_list retval (nargout == 2 ? 2 : 1); |
20862
ac1f8c640d8f
2015 Code Sprint: colamd.cc: use ovl().
Rik <rik@octave.org>
parents:
20853
diff
changeset
|
660 |
20898
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
661 octave_idx_type n_row = 0; |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
662 octave_idx_type n_col = 0; |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
663 octave_idx_type *ridx = 0; |
8da80da1ac37
maint: Use ovl() more places in the code.
Rik <rik@octave.org>
parents:
20862
diff
changeset
|
664 octave_idx_type *cidx = 0; |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
665 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
666 if (args(0).is_sparse_type ()) |
20939
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
667 error ("etree: S must be a sparse matrix"); |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
668 |
20939
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
669 if (args(0).is_complex_type ()) |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
670 { |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
671 SparseComplexMatrix scm = args(0).sparse_complex_matrix_value (); |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
672 |
20939
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
673 n_row = scm.rows (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
674 n_col = scm.cols (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
675 ridx = scm.xridx (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
676 cidx = scm.xcidx (); |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
677 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
678 else |
20939
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
679 { |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
680 SparseMatrix sm = args(0).sparse_matrix_value (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
681 |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
682 n_row = sm.rows (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
683 n_col = sm.cols (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
684 ridx = sm.xridx (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
685 cidx = sm.xcidx (); |
b17fda023ca6
maint: Use new C++ archetype in more files.
Rik <rik@octave.org>
parents:
20909
diff
changeset
|
686 } |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
687 |
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
688 bool is_sym = true; |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
689 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
690 if (nargin == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
691 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
692 std::string str = args(1).xstring_value ("etree: TYP must be a string"); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
693 if (str.find ("C") == 0 || str.find ("c") == 0) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
694 is_sym = false; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
695 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
696 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
697 // column elimination tree post-ordering (reuse variables) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
698 OCTAVE_LOCAL_BUFFER (octave_idx_type, etree, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
699 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
700 if (is_sym) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
701 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
702 if (n_row != n_col) |
20825
66cd994d1b79
eliminate return statements after calls to error
John W. Eaton <jwe@octave.org>
parents:
20790
diff
changeset
|
703 error ("etree: S is marked as symmetric, but is not square"); |
5164 | 704 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
705 symetree (ridx, cidx, etree, 0, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
706 } |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
707 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
708 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
709 OCTAVE_LOCAL_BUFFER (octave_idx_type, colbeg, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
710 OCTAVE_LOCAL_BUFFER (octave_idx_type, colend, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
711 |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
712 for (octave_idx_type i = 0; i < n_col; i++) |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
713 { |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
714 colbeg[i] = cidx[i]; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
715 colend[i] = cidx[i+1]; |
10154
40dfc0c99116
DLD-FUNCTIONS/*.cc: untabify
John W. Eaton <jwe@octave.org>
parents:
9064
diff
changeset
|
716 } |
7924 | 717 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
718 coletree (ridx, colbeg, colend, etree, n_row, n_col); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
719 } |
7924 | 720 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
721 NDArray tree (dim_vector (1, n_col)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
722 for (octave_idx_type i = 0; i < n_col; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
723 // We flag a root with n_col while Matlab does it with zero |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
724 // Convert for matlab compatiable output |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
725 if (etree[i] == n_col) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
726 tree(i) = 0; |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
727 else |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
728 tree(i) = etree[i] + 1; |
5164 | 729 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
730 retval(0) = tree; |
5164 | 731 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
732 if (nargout == 2) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
733 { |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
734 // Calculate the tree post-ordering |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
735 OCTAVE_LOCAL_BUFFER (octave_idx_type, post, n_col + 1); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
736 tree_postorder (n_col, etree, post); |
5164 | 737 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
738 NDArray postorder (dim_vector (1, n_col)); |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
739 for (octave_idx_type i = 0; i < n_col; i++) |
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
740 postorder(i) = post[i] + 1; |
5164 | 741 |
20790
c2d9556d51d0
eliminate return statements after calls to print_usage
John W. Eaton <jwe@octave.org>
parents:
20700
diff
changeset
|
742 retval(1) = postorder; |
5164 | 743 } |
744 | |
745 return retval; | |
746 } |