annotate scripts/statistics/tests/t_test_regression.m @ 3426:f8dde1807dee

[project @ 2000-01-13 08:40:00 by jwe]
author jwe
date Thu, 13 Jan 2000 08:40:53 +0000
parents eb27ea9b7ff8
children d8b731d3f7a3
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1 ## Copyright (C) 1995, 1996, 1997 Kurt Hornik
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2 ##
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3 ## This program is free software; you can redistribute it and/or modify
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4 ## it under the terms of the GNU General Public License as published by
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5 ## the Free Software Foundation; either version 2, or (at your option)
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6 ## any later version.
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7 ##
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8 ## This program is distributed in the hope that it will be useful, but
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9 ## WITHOUT ANY WARRANTY; without even the implied warranty of
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10 ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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11 ## General Public License for more details.
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12 ##
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13 ## You should have received a copy of the GNU General Public License
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14 ## along with this file. If not, write to the Free Software Foundation,
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15 ## 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
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16
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17 ## usage: [pval, t, df] = t_test_regression (y, X, R [, r] [, alt])
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18 ##
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19 ## Performs an t test for the null hypothesis R * b = r in a classical
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20 ## normal regression model y = X * b + e.
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21 ## Under the null, the test statistic t follows a t distribution with
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22 ## df degrees of freedom.
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23 ##
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24 ## r is taken as 0 if not given explicitly.
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25 ##
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26 ## With the optional argument string alt, the alternative of interest
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27 ## can be selected.
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28 ## If alt is "!=" or "<>", the null is tested against the two-sided
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29 ## alternative R * b != r.
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30 ## If alt is ">", the one-sided alternative R * b > r is used,
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31 ## similarly for "<".
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32 ## The default is the two-sided case.
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33 ##
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34 ## pval is the p-value of the test.
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35 ##
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36 ## If no output argument is given, the p-value of the test is displayed.
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37
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38 ## Author: KH <Kurt.Hornik@ci.tuwien.ac.at>
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39 ## Description: Test one linear hypothesis in linear regression model
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40
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41 function [pval, t, df] = t_test_regression (y, X, R, r, alt)
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42
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43 if (nargin == 3)
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44 r = 0;
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45 alt = "!=";
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46 elseif (nargin == 4)
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47 if (isstr (r))
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48 alt = r;
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49 r = 0;
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50 else
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51 alt = "!=";
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52 endif
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53 elseif !(nargin == 5)
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54 usage (["[pval, t, df] ", ...
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55 "= t_test_regression (y, X, R [, r] [, alt]"]);
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56 endif
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57
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58 if (! is_scalar (r))
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59 error ("t_test_regression: r must be a scalar");
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60 elseif (! isstr (alt))
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61 error ("t_test_regression: alt must be a string");
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62 endif
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63
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64 [T, k] = size (X);
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65 if !(is_vector (y) && (length (y) == T))
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66 error (["t_test_regression: ", ...
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67 "y must be a vector of length rows (X)"]);
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68 endif
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69 s = size (R);
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70 if !((max (s) == k) && (min (s) == 1))
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71 error (["t_test_regression: ", ...
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72 "R must be a vector of length columns (X)"]);
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73 endif
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74
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75 R = reshape (R, 1, k);
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76 y = reshape (y, T, 1);
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77 [b, v] = ols (y, X);
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78 df = T - k;
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79 t = (R * b - r) / sqrt (v * R * inv (X' * X) * R');
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80 cdf = t_cdf (t, df);
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81
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82 if (strcmp (alt, "!=") || strcmp (alt, "<>"))
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83 pval = 2 * min (cdf, 1 - cdf);
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84 elseif strcmp (alt, ">")
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85 pval = 1 - cdf;
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86 elseif strcmp (alt, "<")
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87 pval = cdf;
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88 else
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89 error ("t_test_regression: the value `%s' for alt is not possible", alt);
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90 endif
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91
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92 if (nargout == 0)
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93 printf ("pval: %g\n", pval);
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94 endif
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95
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96 endfunction