Mercurial > octave-nkf
annotate src/DLD-FUNCTIONS/__voronoi__.cc @ 14138:72c96de7a403 stable
maint: update copyright notices for 2012
author | John W. Eaton <jwe@octave.org> |
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date | Mon, 02 Jan 2012 14:25:41 -0500 |
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2 | |
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3 Copyright (C) 2000-2012 Kai Habel |
6823 | 4 |
5 This file is part of Octave. | |
6 | |
7 Octave is free software; you can redistribute it and/or modify it | |
8 under the terms of the GNU General Public License as published by the | |
7016 | 9 Free Software Foundation; either version 3 of the License, or (at your |
10 option) any later version. | |
6823 | 11 |
12 Octave is distributed in the hope that it will be useful, but WITHOUT | |
13 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or | |
14 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License | |
15 for more details. | |
16 | |
17 You should have received a copy of the GNU General Public License | |
7016 | 18 along with Octave; see the file COPYING. If not, see |
19 <http://www.gnu.org/licenses/>. | |
6823 | 20 |
21 */ | |
22 | |
23 /* | |
24 20. Augiust 2000 - Kai Habel: first release | |
25 */ | |
26 | |
27 /* | |
28 2003-12-14 Rafael Laboissiere <rafael@laboissiere.net> | |
29 Added optional second argument to pass options to the underlying | |
30 qhull command | |
31 */ | |
32 | |
33 #ifdef HAVE_CONFIG_H | |
34 #include <config.h> | |
35 #endif | |
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36 |
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37 #include <cstdio> |
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38 |
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39 #include <list> |
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40 |
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41 #include "lo-ieee.h" |
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42 |
6823 | 43 #include "Cell.h" |
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44 #include "defun-dld.h" |
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45 #include "error.h" |
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46 #include "oct-obj.h" |
6823 | 47 |
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48 #if defined (HAVE_QHULL) |
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49 # include "oct-qhull.h" |
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50 # if defined (NEED_QHULL_VERSION) |
6823 | 51 char qh_version[] = "__voronoi__.oct 2007-07-24"; |
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52 # endif |
6823 | 53 #endif |
54 | |
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55 DEFUN_DLD (__voronoi__, args, , |
6823 | 56 "-*- texinfo -*-\n\ |
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57 @deftypefn {Loadable Function} {@var{C}, @var{F} =} __voronoi__ (@var{caller}, @var{pts})\n\ |
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58 @deftypefnx {Loadable Function} {@var{C}, @var{F} =} __voronoi__ (@var{caller}, @var{pts}, @var{options})\n\ |
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59 @deftypefnx {Loadable Function} {@var{C}, @var{F}, @var{Inf_Pts} =} __voronoi__ (@dots{})\n\ |
6945 | 60 Undocumented internal function.\n\ |
6823 | 61 @end deftypefn") |
62 { | |
63 octave_value_list retval; | |
6945 | 64 |
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65 std::string caller = args(0).string_value (); |
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66 |
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67 #if defined (HAVE_QHULL) |
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6823 | 69 retval(0) = 0.0; |
70 | |
6945 | 71 int nargin = args.length (); |
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72 if (nargin < 2 || nargin > 3) |
6823 | 73 { |
74 print_usage (); | |
75 return retval; | |
76 } | |
77 | |
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78 Matrix points = args(1).matrix_value (); |
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79 const octave_idx_type dim = points.columns (); |
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80 const octave_idx_type num_points = points.rows (); |
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81 |
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82 points = points.transpose (); |
6945 | 83 |
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84 std::string options; |
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85 |
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86 if (dim <= 4) |
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87 options = " Qbb"; |
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88 else |
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89 options = " Qbb Qx"; |
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90 |
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91 if (nargin == 3) |
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92 { |
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93 octave_value opt_arg = args(2); |
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94 |
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95 if (opt_arg.is_string ()) |
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96 options = " " + opt_arg.string_value (); |
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97 else if (opt_arg.is_empty ()) |
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98 ; // Use default options. |
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99 else if (opt_arg.is_cellstr ()) |
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100 { |
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101 options = ""; |
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102 |
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103 Array<std::string> tmp = opt_arg.cellstr_value (); |
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104 |
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105 for (octave_idx_type i = 0; i < tmp.numel (); i++) |
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106 options += " " + tmp(i); |
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107 } |
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108 else |
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109 { |
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110 error ("%s: OPTIONS must be a string, cell array of strings, or empty", |
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111 caller.c_str ()); |
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112 return retval; |
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113 } |
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114 } |
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115 |
6823 | 116 boolT ismalloc = false; |
117 | |
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118 // Replace the 0 pointer with stdout for debugging information |
6945 | 119 FILE *outfile = 0; |
6880 | 120 FILE *errfile = stderr; |
121 | |
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122 // qh_new_qhull command and points arguments are not const... |
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123 |
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124 std::string cmd = "qhull v" + options; |
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125 |
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126 OCTAVE_LOCAL_BUFFER (char, cmd_str, cmd.length () + 1); |
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127 |
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128 strcpy (cmd_str, cmd.c_str ()); |
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129 |
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130 int exitcode = qh_new_qhull (dim, num_points, points.fortran_vec (), |
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131 ismalloc, cmd_str, outfile, errfile); |
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132 if (! exitcode) |
6823 | 133 { |
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134 // Calling findgood_all provides the number of Voronoi vertices |
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135 // (sets qh num_good). |
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137 qh_findgood_all (qh facet_list); |
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138 |
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139 octave_idx_type num_voronoi_regions |
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140 = qh num_vertices - qh_setsize (qh del_vertices); |
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141 |
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142 octave_idx_type num_voronoi_vertices = qh num_good; |
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143 |
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144 // Find the voronoi centers for all facets. |
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145 |
6945 | 146 qh_setvoronoi_all (); |
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147 |
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148 facetT *facet; |
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149 vertexT *vertex; |
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150 octave_idx_type k; |
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151 |
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152 // Find the number of Voronoi vertices for each Voronoi cell and |
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153 // store them in NI so we can use them later to set the dimensions |
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154 // of the RowVector objects used to collect them. |
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156 FORALLfacets |
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157 { |
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158 facet->seen = false; |
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159 } |
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160 |
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161 OCTAVE_LOCAL_BUFFER (octave_idx_type, ni, num_voronoi_regions); |
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162 for (octave_idx_type i = 0; i < num_voronoi_regions; i++) |
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163 ni[i] = 0; |
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164 |
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165 k = 0; |
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167 FORALLvertices |
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168 { |
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169 if (qh hull_dim == 3) |
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170 qh_order_vertexneighbors (vertex); |
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171 |
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172 bool infinity_seen = false; |
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173 |
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174 facetT *neighbor, **neighborp; |
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176 FOREACHneighbor_ (vertex) |
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177 { |
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178 if (neighbor->upperdelaunay) |
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179 { |
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180 if (! infinity_seen) |
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181 { |
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182 infinity_seen = true; |
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183 ni[k]++; |
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184 } |
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185 } |
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186 else |
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187 { |
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188 neighbor->seen = true; |
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189 ni[k]++; |
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190 } |
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191 } |
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192 |
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193 k++; |
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194 } |
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196 // If Qhull finds fewer regions than points, we will pad the end |
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197 // of the at_inf and C arrays so that they always contain at least |
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198 // as many elements as the given points array. |
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199 |
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200 // FIXME -- is it possible (or does it make sense) for |
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201 // num_voronoi_regions to ever be larger than num_points? |
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202 |
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203 octave_idx_type nr = (num_points > num_voronoi_regions |
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204 ? num_points : num_voronoi_regions); |
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205 |
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206 boolMatrix at_inf (nr, 1, false); |
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208 // The list of Voronoi vertices. The first element is always |
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209 // Inf. |
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210 Matrix F (num_voronoi_vertices+1, dim); |
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211 |
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212 for (octave_idx_type d = 0; d < dim; d++) |
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213 F(0,d) = octave_Inf; |
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214 |
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215 // The cell array of vectors of indices into F that represent the |
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216 // vertices of the Voronoi regions (cells). |
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217 |
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218 Cell C (nr, 1); |
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219 |
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220 // Now loop through the list of vertices again and store the |
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221 // coordinates of the Voronoi vertices and the lists of indices |
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222 // for the cells. |
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224 FORALLfacets |
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225 { |
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226 facet->seen = false; |
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227 } |
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229 octave_idx_type i = 0; |
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230 k = 0; |
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231 |
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233 { |
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234 if (qh hull_dim == 3) |
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235 qh_order_vertexneighbors (vertex); |
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236 |
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237 bool infinity_seen = false; |
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238 |
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239 octave_idx_type idx = qh_pointid (vertex->point); |
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240 |
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241 octave_idx_type num_vertices = ni[k++]; |
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242 |
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243 // Qhull seems to sometimes produces regions with a single |
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244 // vertex. Is that a bug? How can a region have just one |
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245 // vertex? Let's skip it. |
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246 |
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247 if (num_vertices == 1) |
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248 continue; |
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249 |
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250 RowVector facet_list (num_vertices); |
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251 |
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252 octave_idx_type m = 0; |
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253 |
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254 facetT *neighbor, **neighborp; |
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256 FOREACHneighbor_(vertex) |
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257 { |
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258 if (neighbor->upperdelaunay) |
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259 { |
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260 if (! infinity_seen) |
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261 { |
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262 infinity_seen = true; |
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263 facet_list(m++) = 1; |
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264 at_inf(idx) = true; |
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265 } |
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266 } |
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267 else |
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268 { |
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269 if (! neighbor->seen) |
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270 { |
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271 i++; |
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272 for (octave_idx_type d = 0; d < dim; d++) |
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273 F(i,d) = neighbor->center[d]; |
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274 |
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275 neighbor->seen = true; |
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276 neighbor->visitid = i; |
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277 } |
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278 |
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279 facet_list(m++) = neighbor->visitid + 1; |
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280 } |
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281 } |
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282 |
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283 C(idx) = facet_list; |
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284 } |
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286 retval(2) = at_inf; |
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288 retval(0) = F; |
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291 error ("%s: qhull failed", caller.c_str ()); |
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293 // Free memory from Qhull |
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294 qh_freeqhull (! qh_ALL); |
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295 |
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296 int curlong, totlong; |
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297 qh_memfreeshort (&curlong, &totlong); |
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Rik <octave@nomad.inbox5.com>
parents:
13203
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298 |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
13203
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299 if (curlong || totlong) |
13879
440d7914cf01
fix regression in __voronoi__ and convhulln option processing
John W. Eaton <jwe@octave.org>
parents:
13871
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300 warning ("%s: qhull did not free %d bytes of long memory (%d pieces)", |
440d7914cf01
fix regression in __voronoi__ and convhulln option processing
John W. Eaton <jwe@octave.org>
parents:
13871
diff
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301 caller.c_str (), totlong, curlong); |
13746
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
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changeset
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302 |
6823 | 303 #else |
13879
440d7914cf01
fix regression in __voronoi__ and convhulln option processing
John W. Eaton <jwe@octave.org>
parents:
13871
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changeset
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304 error ("%s: not available in this version of Octave", caller.c_str ()); |
6823 | 305 #endif |
6945 | 306 |
6823 | 307 return retval; |
308 } | |
12805
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
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309 |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
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310 /* |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
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311 |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
11586
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312 ## No test needed for internal helper function. |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
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313 %!assert (1) |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
11586
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314 |
3641167e5b75
codesprint: *.cc helper functions do not need tests
Rik <octave@nomad.inbox5.com>
parents:
11586
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315 */ |