changeset 4745:a92a6988fae7

of-sparsersb: update to v1.0.6 * build_packages.m: update sparser version * src/of-sparsersb.mk: update version/checksum * src/of-sparsersb-1-fixes.patch: removed file * dist-files.mk: remove ref to of-sparsersb-1-fixes.patch * Makefile.in: readd sparser to forge packages
author John Donoghue
date Wed, 27 Jun 2018 16:27:33 -0400
parents 5cdbc2b1eec8
children 48149133e0f0
files Makefile.in build_packages.m dist-files.mk src/of-sparsersb-1-fixes.patch src/of-sparsersb.mk
diffstat 5 files changed, 5 insertions(+), 233 deletions(-) [+]
line wrap: on
line diff
--- a/Makefile.in	Wed Jun 27 16:15:35 2018 -0400
+++ b/Makefile.in	Wed Jun 27 16:27:33 2018 -0400
@@ -487,10 +487,8 @@
 
 OCTAVE_FORGE_BASE_URL := 'https://sourceforge.net/projects/octave/files/Octave Forge Packages/Individual Package Releases'
 ## Packages removed from list because build is broken:
-##   sparsersb: configure script needs many fixes for syntax
-##              configure script fails for cross compiling because
-##              it attempts to run Octave
-OCTAVE_FORGE_PACKAGES := $(addprefix of-,miscellaneous struct optim general signal communications image io statistics control geometry windows linear-algebra sockets data-smoothing fuzzy-logic-toolkit quaternion fits tsa netcdf ltfat database instrument-control generate_html nurbs strings financial stk splines dataframe lssa queueing ga odepkg interval nan ocs mapping tisean video zeromq gsl optiminterp dicom)
+## None.
+OCTAVE_FORGE_PACKAGES := $(addprefix of-,miscellaneous struct optim general signal communications image io statistics control geometry windows linear-algebra sockets data-smoothing fuzzy-logic-toolkit quaternion fits tsa netcdf ltfat database instrument-control generate_html nurbs strings financial stk splines dataframe lssa queueing ga odepkg interval nan ocs mapping tisean video zeromq gsl optiminterp dicom sparsersb)
 # get ALL deps for all of- packages, regardless of whether building the actual forge package in the installer
 OCTAVE_FORGE_DEPS:= $(sort $(foreach p,$(addprefix $(TOP_DIR)/src/,$(addsuffix .mk,$(OCTAVE_FORGE_PACKAGES))),$(shell $(SED) -n 's/.*_DEPS.*:=\(.*\)/\1/p' $p)))
 
--- a/build_packages.m	Wed Jun 27 16:15:35 2018 -0400
+++ b/build_packages.m	Wed Jun 27 16:27:33 2018 -0400
@@ -68,7 +68,7 @@
   try_install ocs-0.1.5.tar.gz
   try_install mapping-1.2.1.tar.gz
   try_install tisean-0.2.3.tar.gz
-  try_install sparsersb-1.0.5.tar.gz
+  try_install sparsersb-1.0.6.tar.gz
   try_install video-1.2.4.tar.gz
   try_install zeromq-1.3.0.tar.gz
   try_install gsl-2.1.0.tar.gz
--- a/dist-files.mk	Wed Jun 27 16:15:35 2018 -0400
+++ b/dist-files.mk	Wed Jun 27 16:27:33 2018 -0400
@@ -516,7 +516,6 @@
   of-signal.mk \
   of-sockets-1-cross-fixes.patch \
   of-sockets.mk \
-  of-sparsersb-1-fixes.patch \
   of-sparsersb.mk \
   of-specfun.mk \
   of-splines.mk \
--- a/src/of-sparsersb-1-fixes.patch	Wed Jun 27 16:15:35 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,225 +0,0 @@
-diff -ur sparsersb-1.0.5.orig/src/sparsersb.cc sparsersb-1.0.5/src/sparsersb.cc
---- sparsersb-1.0.5.orig/src/sparsersb.cc	2017-04-08 17:49:45.120506400 -0400
-+++ sparsersb-1.0.5/src/sparsersb.cc	2017-04-08 17:50:04.244313729 -0400
-@@ -311,7 +311,7 @@
- 	// assumes tacitly that rsboi_idx_overflow(IA[i],JA[i])==false for i in 0..nnzA-1.
- 	rsb_err_t errval = RSB_ERR_NO_ERROR;
- 
--	errval = rsb_mtx_get_coo(mtxAp, VA, (rsb_coo_idx_t *)IA, (rsb_coo_idx_ t*)JA, flags );
-+	errval = rsb_mtx_get_coo(mtxAp, VA, (rsb_coo_idx_t *)IA, (rsb_coo_idx_t*)JA, flags );
- 	rsb_nnz_idx_t nnzA = 0;
- 	rsb_mtx_get_info(mtxAp,RSB_MIF_MATRIX_NNZ__TO__RSB_NNZ_INDEX_T,&nnzA); // FIXME: make this a member and use nnz()
- 	rsboi_ri2oi((rsb_coo_idx_t *)IA,nnzA);
-diff -r e6017808f88d src/configure.ac
---- a/src/configure.ac	Fri Jul 21 12:04:41 2017 -0400
-+++ b/src/configure.ac	Fri Jul 21 13:25:48 2017 -0400
-@@ -107,11 +107,7 @@
- 	fi
- fi
- 
--if test -x `which $OCTAVE-cli` ; then
--	OCTAVE_CLI="$OCTAVE-cli";
--else
--	OCTAVE_CLI="$OCTAVE";
--fi
-+OCTAVE_CLI="$OCTAVE --no-gui --no-window-system";
- 
- SPARSERSB_USE_64BIT_IDX=`$OCTAVE_CLI --no-line-editing -qf --eval 'printf ("%i", sizemax() > intmax ("int32"))'`
- if [test x"$SPARSERSB_USE_64BIT_IDX" = x"1" ]; then
-diff -r 105149bc4206 src/Makeconf.in
---- a/src/Makeconf.in	Fri Jul 21 13:47:46 2017 -0400
-+++ b/src/Makeconf.in	Fri Jul 21 14:52:25 2017 -0400
-@@ -4,3 +4,4 @@
- SPARSERSB_CXXFLAGS = @SPARSERSB_CXXFLAGS@
- SPARSERSB_LDFLAGS = @SPARSERSB_LDFLAGS@
- SPARSERSB_CXX11= @SPARSERSB_CXX11@
-+OCTAVE_FUNC_DEFINES = @HAVE_OCTAVE_VALUE_ISCOMPLEX@
-diff -r 105149bc4206 src/Makefile
---- a/src/Makefile	Fri Jul 21 13:47:46 2017 -0400
-+++ b/src/Makefile	Fri Jul 21 14:52:25 2017 -0400
-@@ -1,7 +1,7 @@
- sinclude Makeconf
- # Makeconf is created by the configure script.
- # You can also not use it but set explicitly the following:
--CXXFLAGS=$(SPARSERSB_CXXFLAGS)
-+CXXFLAGS=$(SPARSERSB_CXXFLAGS) $(OCTAVE_FUNC_DEFINES)
- LFLAGS=$(shell $(MKOCTFILE) -p LFLAGS) $(SPARSERSB_LDFLAGS)
- CXXFLAGS_CXX11=$(SPARSERSB_CXX11)
- 
-diff -r 105149bc4206 src/configure.ac
---- a/src/configure.ac	Fri Jul 21 13:47:46 2017 -0400
-+++ b/src/configure.ac	Fri Jul 21 14:52:25 2017 -0400
-@@ -154,6 +154,40 @@
- 	AC_MSG_ERROR([$PACKAGE_NAME requires librsb library])
- fi
- 
-+# check for octave functions
-+save_CXX="$CXX"
-+save_CXXFLAGS="$CXXFLAGS"
-+CXX=`${MKOCTFILE} -p CXX`
-+CXXFLAGS="$CXXFLAGS -I`$MKOCTFILE -p OCTINCLUDEDIR`"
-+
-+# need to use interpreter->get_load_path in dev version of octave,
-+# prior to that methods of load_path were static
-+AC_CACHE_CHECK(
-+  [for octave_value function iscomplex],
-+  [octave_value_cv_iscomplex],
-+  [AC_COMPILE_IFELSE(
-+    [AC_LANG_PROGRAM([
-+      #include <oct.h>
-+      #include <octave.h>
-+      ],
-+      [
-+        octave_value().iscomplex();
-+      ])],
-+    [octave_value_cv_iscomplex=yes],
-+    [octave_value_cv_iscomplex=no])
-+  ])
-+if test "$octave_value_cv_iscomplex" = "yes" ; then
-+  HAVE_OCTAVE_VALUE_ISCOMPLEX=-DHAVE_OCTAVE_VALUE_ISCOMPLEX
-+else
-+  HAVE_OCTAVE_VALUE_ISCOMPLEX=
-+fi
-+AC_SUBST(HAVE_OCTAVE_VALUE_ISCOMPLEX)
-+
-+CC=$save_CXX
-+CXXFLAGS=$save_CXXFLAGS
-+
-+
-+
- AC_SUBST(OCTAVE)
- AC_SUBST(TARGETS)
- AC_SUBST(SPARSERSB_CXXFLAGS)
-@@ -163,6 +197,7 @@
- AC_CONFIG_FILES([Makeconf])
- AC_OUTPUT
- 
-+
- AC_MSG_NOTICE([
- 
- $PACKAGE_NAME is configured with:
-diff -r 105149bc4206 src/sparsersb.cc
---- a/src/sparsersb.cc	Fri Jul 21 13:47:46 2017 -0400
-+++ b/src/sparsersb.cc	Fri Jul 21 14:52:25 2017 -0400
-@@ -177,7 +177,11 @@
- 
- #ifdef RSB_NUMERICAL_TYPE_DOUBLE_COMPLEX
- #define RSBOI_WANT_DOUBLE_COMPLEX 1
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+#define ORSB_RSB_TYPE_FLAG(OBJ) (((OBJ).iscomplex())?RSB_NUMERICAL_TYPE_DOUBLE:RSB_NUMERICAL_TYPE_DOUBLE_COMPLEX)
-+#else
- #define ORSB_RSB_TYPE_FLAG(OBJ) (((OBJ).is_complex_type())?RSB_NUMERICAL_TYPE_DOUBLE:RSB_NUMERICAL_TYPE_DOUBLE_COMPLEX)
-+#endif
- #else
- #define RSBOI_WANT_DOUBLE_COMPLEX 0
- #define ORSB_RSB_TYPE_FLAG(OBJ) RSB_NUMERICAL_TYPE_DOUBLE
-@@ -228,7 +232,11 @@
- }
- #endif
- #if RSBOI_WANT_DOUBLE_COMPLEX
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+#define RSBOI_BINOP_PREVAILING_TYPE(V1,V2) (((V1).iscomplex()||(V2).iscomplex())?RSB_NUMERICAL_TYPE_DOUBLE_COMPLEX:RSB_NUMERICAL_TYPE_DOUBLE)
-+#else
- #define RSBOI_BINOP_PREVAILING_TYPE(V1,V2) (((V1).is_complex_type()||(V2).is_complex_type())?RSB_NUMERICAL_TYPE_DOUBLE_COMPLEX:RSB_NUMERICAL_TYPE_DOUBLE)
-+#endif
- #else
- #define RSBOI_BINOP_PREVAILING_TYPE(V1,V2) RSBOI_TYPECODE
- #endif
-@@ -863,7 +871,11 @@
- 		bool is_diagonal (void) const { RSBOI_0_EMCHECK(this->mtxAp); RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG);return RSB_DO_FLAG_HAS(this->rsbflags(),RSB_FLAG_DIAGONAL)?true:false; }/* FIXME: new: not sure whether this is ever called */
- 		bool is_lower_triangular (void) const { RSBOI_0_EMCHECK(this->mtxAp); RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG);return RSB_DO_FLAG_HAS(this->rsbflags(),RSB_FLAG_LOWER_TRIANGULAR)?true:false; }/* FIXME: new: not sure whether this is ever called */
- 		bool is_upper_triangular (void) const { RSBOI_0_EMCHECK(this->mtxAp); RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG);return RSB_DO_FLAG_HAS(this->rsbflags(),RSB_FLAG_UPPER_TRIANGULAR)?true:false; }/* FIXME: new: not sure whether this is ever called */
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+		bool iscomplex (void) const { RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG); return !is_real_type(); }
-+#else
- 		bool is_complex_type (void) const { RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG); return !is_real_type(); }
-+#endif
- 		bool is_bool_type (void) const { return false; }
- 		bool is_integer_type (void) const { return false; }
- 		bool is_square (void) const { return this->rows()==this->cols(); }
-@@ -1534,7 +1546,11 @@
- 	rsb_err_t errval = RSB_ERR_NO_ERROR;
- 	RSBOI_DEBUG_NOTICE(RSBOI_D_EMPTY_MSG);
- 
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	if(v1.iscomplex())
-+#else
- 	if(v1.is_complex_type())
-+#endif
- 	{
- 		ComplexMatrix retval = v2.complex_matrix_value();
- 		octave_idx_type b_nc = retval.cols ();
-@@ -1640,7 +1656,11 @@
- 	if(v1.is__triangular()) 
- 		return rsboi_spsm(v1,v2,RSB_TRANSPOSITION_N);
- 
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	if(v1.iscomplex() || v2.iscomplex())
-+#else
- 	if(v1.is_complex_type() || v2.is_complex_type())
-+#endif
- 		return (v1.sparse_complex_matrix_value()).solve(v2.sparse_complex_matrix_value());
- 	else
- 		return (v1.sparse_matrix_value()).solve(v2.matrix_value());
-@@ -1655,7 +1675,11 @@
- 	if(v1.is__triangular()) 
- 		return rsboi_spsm(v1,v2,RSB_TRANSPOSITION_T);
- 
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	if(v1.iscomplex() || v2.iscomplex())
-+#else
- 	if(v1.is_complex_type() || v2.is_complex_type())
-+#endif
- 		return (v1.sparse_complex_matrix_value().transpose()).solve(v2.sparse_complex_matrix_value());
- 	else
- 		return (v1.sparse_matrix_value().transpose()).solve(v2.matrix_value());
-@@ -1671,7 +1695,11 @@
- 	if(v1.is__triangular()) 
- 		return rsboi_spsm(v1,v2,RSB_TRANSPOSITION_N);
- 
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	if(v1.iscomplex() || v2.iscomplex())
-+#else
- 	if(v1.is_complex_type() || v2.is_complex_type())
-+#endif
- 		return (v1.sparse_complex_matrix_value()).solve(v2.sparse_complex_matrix_value());
- 	else
- 		return (v1.sparse_matrix_value()).solve(v2.matrix_value());
-@@ -1685,7 +1713,11 @@
- 	if(v1.is__triangular()) 
- 		return rsboi_spsm(v1,v2,RSB_TRANSPOSITION_T);
- 
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	if(v1.iscomplex() || v2.iscomplex())
-+#else
- 	if(v1.is_complex_type() || v2.is_complex_type())
-+#endif
- 		return (v1.sparse_complex_matrix_value().transpose()).solve(v2.sparse_complex_matrix_value());
- 	else
- 		return (v1.sparse_matrix_value().transpose()).solve(v2.matrix_value());
-@@ -2199,8 +2231,13 @@
- 	int nargin = args.length ();
- 	octave_value_list retval;
- 	octave_sparsersb_mtx*osmp = RSBOI_NULL;
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+	bool ic0 = nargin>0?(args(0).iscomplex()):false;
-+	bool ic3 = nargin>2?(args(2).iscomplex()):false;
-+#else
- 	bool ic0 = nargin>0?(args(0).is_complex_type()):false;
- 	bool ic3 = nargin>2?(args(2).is_complex_type()):false;
-+#endif
- 	bool isr = (nargin>0 && args(0).type_name()==RSB_OI_TYPEINFO_STRING);
- 
- 	RSBOI_DEBUG_NOTICE("in sparsersb()\n");
-@@ -2522,7 +2559,11 @@
- 				if(nargout) retval.append(osmp->cols()),--nargout;
- 				if(nargout) retval.append(osmp->nnz()),--nargout;
- 				if(nargout) retval.append(osmp->get_info_string()),--nargout;
-+#ifdef HAVE_OCTAVE_VALUE_ISCOMPLEX
-+				if(nargout) retval.append((!osmp->iscomplex())?"real":"complex"),--nargout;
-+#else
- 				if(nargout) retval.append((!osmp->is_complex_type())?"real":"complex"),--nargout;
-+#endif
- 				if(nargout) retval.append(osmp->get_symmetry()),--nargout;
- 			}
- 		}
--- a/src/of-sparsersb.mk	Wed Jun 27 16:15:35 2018 -0400
+++ b/src/of-sparsersb.mk	Wed Jun 27 16:27:33 2018 -0400
@@ -3,8 +3,8 @@
 
 PKG             := of-sparsersb
 $(PKG)_IGNORE   :=
-$(PKG)_VERSION  := 1.0.5
-$(PKG)_CHECKSUM := 2f259e2b3993134c6f6552327fd5a5933a83bae6
+$(PKG)_VERSION  := 1.0.6
+$(PKG)_CHECKSUM := 3d005cf6db118d8835453efd770f5b2ded8a3197
 $(PKG)_REMOTE_SUBDIR := 
 $(PKG)_SUBDIR   := sparsersb-$($(PKG)_VERSION)
 $(PKG)_FILE     := sparsersb-$($(PKG)_VERSION).tar.gz